For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQATKAACGSEDSNFKVVAVAKDG TDHTECPADVDSSYSSRNVLGGANSTLCLDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQ DVASPVTVDQCASGVGYTYTERRFVVCVEDVGGSSQT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_2148 | lppU | - | 100% (177) | lipoprotein LppU |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2807c | lppU | 2e-66 | 67.23% (177) | lipoprotein LppU |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv2784c | lppU | 2e-66 | 67.23% (177) | lipoprotein LppU |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3107c | - | 2e-36 | 44.85% (165) | lipoprotein LppU |
| M. marinum M | MMAR_1923 | lppU | 1e-101 | 100.00% (177) | lipoprotein LppU |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2655 | - | 1e-43 | 53.57% (140) | LppU protein |
| M. thermoresistible (build 8) | TH_1282 | lppU | 7e-45 | 51.57% (159) | PROBABLE LIPOPROTEIN LPPU |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_2148|M.ulcerans_Agy99 MR--ALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQ
MMAR_1923|M.marinum_M MR--ALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQ
Mb2807c|M.bovis_AF2122/97 MR--AWLAAATTALFVVAT----GCSSATNVAELKVGDCVKLAGTPDRPQ
Rv2784c|M.tuberculosis_H37Rv MR--AWLAAATTALFVVAT----GCSSATNVAELKVGDCVKLAGTPDRPQ
MSMEG_2655|M.smegmatis_MC2_155 ---------------------------------MQAGDCLELGGTFDQPE
TH_1282|M.thermoresistible__bu MRTPPRDSPVAAGSAILAIVAVVGAVSGCASADLQVGDCLRMGGPPDNPD
MAB_3107c|M.abscessus_ATCC_199 MGGPGTLGAASIVLLTVGVALLSGCSAAAASDGLAVGDCVNLSGSDQRAK
: .***:.:.*. :...
MUL_2148|M.ulcerans_Agy99 ATKAACGSEDSNFKVVAVAKDGTDHTECPADVDSSYSSRNVLGGANSTLC
MMAR_1923|M.marinum_M ATKAACGSEDSNFKVVAVAKDGTDHTECPADVDSSYSSRNVLGGANSTLC
Mb2807c|M.bovis_AF2122/97 ATKAECGSPASNFKVVAVVQE--DHAECPADVDSTYSMRNAFNGSTNTIC
Rv2784c|M.tuberculosis_H37Rv ATKAECGSPASNFKVVAVVQE--DHAECPADVDSTYSMRNAFNGSTNTIC
MSMEG_2655|M.smegmatis_MC2_155 ATRAECGSKKSNYKVVQTVAD---SARCPADVDSYYTLSSRFGGETHTVC
TH_1282|M.thermoresistible__bu AAEVPCGTPESTHKIAAIVQD---EAECPADVDSYYSMRSTFDDATTTVC
MAB_3107c|M.abscessus_ATCC_199 MVKEPCGSPTSNFKVFAKAAT---DADCPRDADSSYYAKRGFGRKSQALC
.. **: *..*: . : ** *.** * :. . ::*
MUL_2148|M.ulcerans_Agy99 LDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQDVASPVTV
MMAR_1923|M.marinum_M LDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQDVASPVTV
Mb2807c|M.bovis_AF2122/97 LDIDWVIGGCMSVDPTHNTDPFRVDCDDASVPHRQRATQILKDLDSPVSV
Rv2784c|M.tuberculosis_H37Rv LDIDWVIGGCMSVDPTHNTDPFRVDCDDASVPHRQRATQILKDLDSPVSV
MSMEG_2655|M.smegmatis_MC2_155 MDIDWVVGGCMNVDPENNTDPYRVDCSDAGAPHRQRVTEVLEGISN---P
TH_1282|M.thermoresistible__bu LDIDWVVGGCMSIDPTDEADPVRADCADPAAPHLQRVTEILDDVAD---V
MAB_3107c|M.abscessus_ATCC_199 LDIDWVVGGCMDVPDKWDGDPVRVDCNDPRAQNKKRVTQILQQVST---A
:*:***:*.**.: . ** *..* *. . : :*.*::*. :
MUL_2148|M.ulcerans_Agy99 DQCASGVGYTYTERRFVVCVEDVGGSSQT
MMAR_1923|M.marinum_M DQCASGVGYTYTERRFVVCVEDVGGSSQT
Mb2807c|M.bovis_AF2122/97 DQCASGVGYVYTQRRFAVCVEDVTGGPRS
Rv2784c|M.tuberculosis_H37Rv DQCASGVGYVYTQRRFAVCVEDVTGGPRS
MSMEG_2655|M.smegmatis_MC2_155 DQCATGLGYAYDERQFTVCVENVR-----
TH_1282|M.thermoresistible__bu DQCVSGTGYAYEDRQFTVCVEHVEV----
MAB_3107c|M.abscessus_ATCC_199 DDCITGLGYPYVDRNFTVCVEELP-----
*:* :* ** * :*.*.****.: