For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQATKAACGSEDSNFKVVAVAKDG TDHTECPADVDSSYSSRNVLGGANSTLCLDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQ DVASPVTVDQCASGVGYTYTERRFVVCVEDVGGSSQT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1923 | lppU | - | 100% (177) | lipoprotein LppU |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2807c | lppU | 2e-66 | 67.23% (177) | lipoprotein LppU |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2784c | lppU | 2e-66 | 67.23% (177) | lipoprotein LppU |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3107c | - | 2e-36 | 44.85% (165) | lipoprotein LppU |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2655 | - | 1e-43 | 53.57% (140) | LppU protein |
M. thermoresistible (build 8) | TH_1282 | lppU | 7e-45 | 51.57% (159) | PROBABLE LIPOPROTEIN LPPU |
M. ulcerans Agy99 | MUL_2148 | lppU | 1e-101 | 100.00% (177) | lipoprotein LppU |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1923|M.marinum_M MR--ALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQ MUL_2148|M.ulcerans_Agy99 MR--ALFLAVLMALAVPASGVLVGCSSTTKAADLAVGDCLKLAGPPDRPQ Mb2807c|M.bovis_AF2122/97 MR--AWLAAATTALFVVAT----GCSSATNVAELKVGDCVKLAGTPDRPQ Rv2784c|M.tuberculosis_H37Rv MR--AWLAAATTALFVVAT----GCSSATNVAELKVGDCVKLAGTPDRPQ MSMEG_2655|M.smegmatis_MC2_155 ---------------------------------MQAGDCLELGGTFDQPE TH_1282|M.thermoresistible__bu MRTPPRDSPVAAGSAILAIVAVVGAVSGCASADLQVGDCLRMGGPPDNPD MAB_3107c|M.abscessus_ATCC_199 MGGPGTLGAASIVLLTVGVALLSGCSAAAASDGLAVGDCVNLSGSDQRAK : .***:.:.*. :... MMAR_1923|M.marinum_M ATKAACGSEDSNFKVVAVAKDGTDHTECPADVDSSYSSRNVLGGANSTLC MUL_2148|M.ulcerans_Agy99 ATKAACGSEDSNFKVVAVAKDGTDHTECPADVDSSYSSRNVLGGANSTLC Mb2807c|M.bovis_AF2122/97 ATKAECGSPASNFKVVAVVQE--DHAECPADVDSTYSMRNAFNGSTNTIC Rv2784c|M.tuberculosis_H37Rv ATKAECGSPASNFKVVAVVQE--DHAECPADVDSTYSMRNAFNGSTNTIC MSMEG_2655|M.smegmatis_MC2_155 ATRAECGSKKSNYKVVQTVAD---SARCPADVDSYYTLSSRFGGETHTVC TH_1282|M.thermoresistible__bu AAEVPCGTPESTHKIAAIVQD---EAECPADVDSYYSMRSTFDDATTTVC MAB_3107c|M.abscessus_ATCC_199 MVKEPCGSPTSNFKVFAKAAT---DADCPRDADSSYYAKRGFGRKSQALC .. **: *..*: . : ** *.** * :. . ::* MMAR_1923|M.marinum_M LDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQDVASPVTV MUL_2148|M.ulcerans_Agy99 LDVDWVLGSCMSVDPDHKTDPFRVGCNDASAPHRQRATQILQDVASPVTV Mb2807c|M.bovis_AF2122/97 LDIDWVIGGCMSVDPTHNTDPFRVDCDDASVPHRQRATQILKDLDSPVSV Rv2784c|M.tuberculosis_H37Rv LDIDWVIGGCMSVDPTHNTDPFRVDCDDASVPHRQRATQILKDLDSPVSV MSMEG_2655|M.smegmatis_MC2_155 MDIDWVVGGCMNVDPENNTDPYRVDCSDAGAPHRQRVTEVLEGISN---P TH_1282|M.thermoresistible__bu LDIDWVVGGCMSIDPTDEADPVRADCADPAAPHLQRVTEILDDVAD---V MAB_3107c|M.abscessus_ATCC_199 LDIDWVVGGCMDVPDKWDGDPVRVDCNDPRAQNKKRVTQILQQVST---A :*:***:*.**.: . ** *..* *. . : :*.*::*. : MMAR_1923|M.marinum_M DQCASGVGYTYTERRFVVCVEDVGGSSQT MUL_2148|M.ulcerans_Agy99 DQCASGVGYTYTERRFVVCVEDVGGSSQT Mb2807c|M.bovis_AF2122/97 DQCASGVGYVYTQRRFAVCVEDVTGGPRS Rv2784c|M.tuberculosis_H37Rv DQCASGVGYVYTQRRFAVCVEDVTGGPRS MSMEG_2655|M.smegmatis_MC2_155 DQCATGLGYAYDERQFTVCVENVR----- TH_1282|M.thermoresistible__bu DQCVSGTGYAYEDRQFTVCVEHVEV---- MAB_3107c|M.abscessus_ATCC_199 DDCITGLGYPYVDRNFTVCVEELP----- *:* :* ** * :*.*.****.: