For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKRIAAVLAVTLALVSCGDKDTKSFDLQAHRGGRGETTEESLRAFAKALELGVSTLELDIVISKDGKPMV WHDPVIDPAKCSDTGPVRPGDPQFPYVGKLVKDLTSGQLHTLDCGKLLTDFPRAEVVKNDKIAQLSDVFA LADSYHADVRFNIETKVEAAEPQKSAEPQRFVDIILETIRAAGKLDKVEIQSFDWRTLPMTKRAEPGIPL VALWDETTWYPGSPWLGGVDPAIVSDPIDGAKQVGATILSPGYTVPYGGKVGDPGFTLVADKKFIDKAHR LGLKVIPWTINDAETMKAQIDAGADGIISDYPTTLRKVMAESDLPLPPAYHR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0573 | - | - | 100% (332) | putative glycerophosphoryl diester phosphodiesterase precursor (GlpQ) |
M. abscessus ATCC 19977 | MAB_0123 | - | 8e-11 | 23.99% (296) | putative glycerophosphoryl diester phosphodiesterase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3872c | glpQ1 | 3e-05 | 20.68% (295) | glycerophosphoryl diester phosphodiesterase |
M. gilvum PYR-GCK | Mflv_1140 | - | 8e-12 | 25.00% (296) | glycerophosphodiester phosphodiesterase |
M. tuberculosis H37Rv | Rv3842c | glpQ1 | 3e-05 | 20.68% (295) | glycerophosphoryl diester phosphodiesterase |
M. leprae Br4923 | MLBr_00325 | - | 1e-13 | 53.97% (63) | hypothetical protein MLBr_00325 |
M. marinum M | MMAR_5394 | glpQ1 | 4e-07 | 24.22% (289) | glycerophosphoryl diester phosphodiesterase GlpQ1 |
M. avium 104 | MAV_0576 | - | 1e-101 | 56.88% (327) | glycerophosphoryl diester phosphodiesterase family protein |
M. smegmatis MC2 155 | MSMEG_6423 | - | 5e-10 | 22.37% (295) | glycerophosphoryl diester phosphodiesterase family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_5015 | glpQ1 | 2e-07 | 25.52% (290) | glycerophosphoryl diester phosphodiesterase GlpQ1 |
M. vanbaalenii PYR-1 | Mvan_0998 | - | 1e-130 | 70.13% (308) | glycerophosphoryl diester phosphodiesterase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5394|M.marinum_M -------------MGMTWADEVIAG-----------------HPFVVAHR MUL_5015|M.ulcerans_Agy99 ---------------MTWADEVIAG-----------------HPFVVAHR Mb3872c|M.bovis_AF2122/97 ---------------MTWADEVLAG-----------------HPFVVAHR Rv3842c|M.tuberculosis_H37Rv ---------------MTWADEVLAG-----------------HPFVVAHR Mflv_1140|M.gilvum_PYR-GCK ----------------MSSGATLGG-----------------HPFVVAHR MSMEG_6423|M.smegmatis_MC2_155 ----------MTEADAGADGQAPTGPT---------------HPFVVAHR MAB_0573|M.abscessus_ATCC_1997 -----------MKRIAAVLAVTLALVS--------CGDKDTKSFDLQAHR Mvan_0998|M.vanbaalenii_PYR-1 MPSNTAAPPQASRRRRLLLAAVTAMVVGSVPTVSFPAAAQVPEFDLQAHR MAV_0576|M.avium_104 -MSSLGSRWAVAAAVALLMAVLLSAAP---------VYGQPATFDLQAHR MLBr_00325|M.leprae_Br4923 -------------------------------------------------- MMAR_5394|M.marinum_M GASGARPEHTLAAYDLALKQGADGVECDVRLTRDGHLVCVHDRRLDRTST MUL_5015|M.ulcerans_Agy99 GASGARPEHTLAAYDLALKQGADGVECDVRLTRDGHLVCVHDRRLDRTST Mb3872c|M.bovis_AF2122/97 GASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTST Rv3842c|M.tuberculosis_H37Rv GASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTST Mflv_1140|M.gilvum_PYR-GCK GASADRPEHTLAAYQLALEEGADAVECDVRLTRDGHLVCVHDRRLDRTSS MSMEG_6423|M.smegmatis_MC2_155 GASADRPEHTLAAYDLALQEGADGLECDVRLTRDGHLVCVHDRKVDRTST MAB_0573|M.abscessus_ATCC_1997 GGRGETTEESLRAFAKALELGVSTLELDIVISKDGKPMVWHDPVIDPAKC Mvan_0998|M.vanbaalenii_PYR-1 GGRGETTEESLRAFAKSLELGVSTLELDVVLTKDGQPLVWHDPVLQPEKC MAV_0576|M.avium_104 GGRGETTEESLRAFAKAIQTGVSTLELDIVVTRDGQPLVWHDPTIQADKC MLBr_00325|M.leprae_Br4923 -------------------------------------------------- MMAR_5394|M.marinum_M GAG---------------LVSTMTLDQLRELEYGAWHDSWRPDGAHGDTS MUL_5015|M.ulcerans_Agy99 GAG---------------LVSTMTLDQLRELEYGAWHDSRRPDGAHGDTS Mb3872c|M.bovis_AF2122/97 GAG---------------LVSTMTLAQLRELEYGAWHDSWRPDGSHGDTS Rv3842c|M.tuberculosis_H37Rv GAG---------------LVSTMTLAQLRELEYGAWHDSWRPDGSHGDTS Mflv_1140|M.gilvum_PYR-GCK GTG---------------LVSDMTLAQLRELDFGAWHPSRRDDVSGGDTG MSMEG_6423|M.smegmatis_MC2_155 GTG---------------LVSEMTLAELRKLNFGSWHPSWRADSSGDDTG MAB_0573|M.abscessus_ATCC_1997 SDTGPVRPGDPQFPYVGKLVKDLTSGQLHTLDCGKLLTDFPRAEVVKNDK Mvan_0998|M.vanbaalenii_PYR-1 TDTGPAFAADAQYPYVGKLVHDLTLAQIRTLDCGKLLDDFPDAEVVTANK MAV_0576|M.avium_104 SDTGPAFPGDPGYPYVGKLVHQLTVAQIHTLDCGHRLKEFPDAEVVRGNK MLBr_00325|M.leprae_Br4923 --------------------------------------------MLRGNK MMAR_5394|M.marinum_M LLTLDALISLVLDWKRP-VKVFIETKHPVRYGSLVESKVLALLQRFGIAQ MUL_5015|M.ulcerans_Agy99 LLTLDALISLVLDWKRP-VKVFIETKHPVRYGSLVESKVLALLQRFGIAQ Mb3872c|M.bovis_AF2122/97 LLTLDALVSLVLDWHRP-VKIFVETKHPVRYGSLVENKLLALLHRFGIAA Rv3842c|M.tuberculosis_H37Rv LLTLDALVSLVLDWHRP-VKIFVETKHPVRYGSLVENKLLALLHRFGIAA Mflv_1140|M.gilvum_PYR-GCK LLTLDDLVSLVMDWNRP-VKMFIETKHPVRYGGLVESKVLALLHRYGIAS MSMEG_6423|M.smegmatis_MC2_155 VLTLDELVRMALDWNRP-VKLFIETKHPVRYGALVENKLLALLHRYGIAA MAB_0573|M.abscessus_ATCC_1997 IAQLSDVFALADSYHAD-VRFNIETKVEAAE-PQKSAEPQRFVDIILETI Mvan_0998|M.vanbaalenii_PYR-1 IATLPEVFGLADSYAAD-VRFNIETKIEADK-PETSAGPREIVDAVLAAA MAV_0576|M.avium_104 IATLPEVFAVADSHRADAIRYNIETKVEPDD-TGASAPPQEFVDVILAAV MLBr_00325|M.leprae_Br4923 IVVLPEVFALTDYYLAD-VRFNIETKVAADR-PAVSVFSQEFVDVVLAVV : * :. :. :: :*** . ::. . MMAR_5394|M.marinum_M PASADRSRAVVMSFSAAAVWRIRRAAPLLPTVLLGKTARYLASG------ MUL_5015|M.ulcerans_Agy99 PASADRSRAAAMSFSAAAVWRIRRAAPLLPTVLLGKTARYLASG------ Mb3872c|M.bovis_AF2122/97 PASADRSRAVVMSFSAAAVWRIRRAAPLLPTVLLGKTPRYLTSS------ Rv3842c|M.tuberculosis_H37Rv PASADRSRAVVMSFSAAAVWRIRRAAPLLPTVLLGKTPRYLTSS------ Mflv_1140|M.gilvum_PYR-GCK PASADMARAVVMSFSAGAVWRIRRAAPMLPTVLLGETSRYLGGG------ MSMEG_6423|M.smegmatis_MC2_155 PASADMARAVVMSFSAAAVWRIRRAAPMLPTVLLGETSRYLGGS------ MAB_0573|M.abscessus_ATCC_1997 RAAGKLDKVEIQSFDWRTLPMTKRAEPGIPLVALWDETTWYPGSPWLGGV Mvan_0998|M.vanbaalenii_PYR-1 RSAGKLDRVEIQSFDWRTLPLVRHLEPSIPLVALWDETTWVPGSPWLAGI MAV_0576|M.avium_104 RSADKLARVEIQSFDWRTLPLVRRAEPSIPLVALYDER------------ MLBr_00325|M.leprae_Br4923 RSVGKVDRVASP-----------------------GER------------ : . :. MMAR_5394|M.marinum_M -----AASAVGATAVGPSLAVLR-----------------EYPQLVDRAA MUL_5015|M.ulcerans_Agy99 -----AASAVGATAVGPSLAVLR-----------------EYPQLVDRAA Mb3872c|M.bovis_AF2122/97 -----AATAVGATAVGPSLPALK-----------------EYPQLVDRSA Rv3842c|M.tuberculosis_H37Rv -----AATAVGATAVGPSLPALK-----------------EYPQLVDRSA Mflv_1140|M.gilvum_PYR-GCK -----AATTVGATAVGPSIATLR-----------------EHPELVDRAA MSMEG_6423|M.smegmatis_MC2_155 -----AATTVGATAVGPSIATLR-----------------EHPELVDRAA MAB_0573|M.abscessus_ATCC_1997 DPAIVSDPIDGAKQVGATILSPGYTVPYGGKVGDPGFTLVADKKFIDKAH Mvan_0998|M.vanbaalenii_PYR-1 DPAVVGDPLTGATMVGAGIVSPGYSIPYGLTPDDPGFALVADRPFIERAH MAV_0576|M.avium_104 ---AAGDPVLGARAAGADIVSP-------------DYRLVTGKPYVDRAH MLBr_00325|M.leprae_Br4923 -------PADGAS------------------------------------- . ** MMAR_5394|M.marinum_M AQGRAVYCWGVDEYEDFDFCRDVGVAWMATDHPGRAKAWLQHGRPGVSSG MUL_5015|M.ulcerans_Agy99 AQGRAVYCWGVDEYEDIDFCRDVGVAWMASDHPGRAKAWLQHGRPGVSSG Mb3872c|M.bovis_AF2122/97 AQGRAVYCWNVDEYEDIDFCREVGVAWIGTHHPGRTKAWLEDGR---ANG Rv3842c|M.tuberculosis_H37Rv AQGRAVYCWNVDEYEDIDFCREVGVAWIGTHHPGRTKAWLEDGR---ANG Mflv_1140|M.gilvum_PYR-GCK AQGRALYCWTVDHYEDVQYCADLGVAWIATNHPGRTKAWLQNGL----TG MSMEG_6423|M.smegmatis_MC2_155 AQGRALYCWTVDHYEDVRFCRDVGVAWIATNHPGRTKDWLQNGL----TG MAB_0573|M.abscessus_ATCC_1997 RLGLKVIPWTINDAETMKAQIDAGADGIISDYPTTLRKVMAESDLPLPPA Mvan_0998|M.vanbaalenii_PYR-1 AMGLKVIPWTVNDEDTMRAQIVAGADGIITDYPALLRDVMTQLGLPLPPP MAV_0576|M.avium_104 ALGLKVIPWTVDDAENMRRQIDYGVDGLITDFPTLARGVLAELGVPLPPA MLBr_00325|M.leprae_Br4923 --GLAVY--TVG--------------GLMG-------------------- * : :. : MMAR_5394|M.marinum_M PAAPPEA MUL_5015|M.ulcerans_Agy99 PAAPPEA Mb3872c|M.bovis_AF2122/97 TTR---- Rv3842c|M.tuberculosis_H37Rv TTR---- Mflv_1140|M.gilvum_PYR-GCK AGRD--- MSMEG_6423|M.smegmatis_MC2_155 AGRD--- MAB_0573|M.abscessus_ATCC_1997 YHR---- Mvan_0998|M.vanbaalenii_PYR-1 YRRH--- MAV_0576|M.avium_104 VPG---- MLBr_00325|M.leprae_Br4923 -------