For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_0328 (-)

annotation: putative acyl-CoA dehydrogenase
coordinates: 328365 - 329546
length: 393

MIDFSIPEELAAKAQRVREFVTETVIPYERDPRLTAHGPTEELRDELVGKARAAGLLTVQAPESYGGWGL
SHIGQAVIFEAAGWSTLGPIAMNCAAPDEGNMFLLGKITNEEQSEKFLRPVIEGYQRSAFAMTEPDGAGS
DPSQLKTSATFDGQNFVINGRKWLITGARGAKTWIIMANLEANDHLPEGPTLFLCDGETEGIVIERIMNT
MDRNYAEGHAVVRFDNLTLPREALLGETGQAFRYAQLRLAPARLTHCMRWLGAASRAQDIAVDYARTRTS
FGKTIGEHQGVSFMLADNEIALHQCRLTIWHACWMMDNGAKGRHESSMAKSFVSEELFKVTDRCVQVLGG
IGISDETPVEMIFRDMRAFRLYDGPTEVHKYAIGRQVLRTPRA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_0328--100% (393)putative acyl-CoA dehydrogenase
M. abscessus ATCC 19977MAB_0255-2e-6138.31% (402) putative acyl-CoA dehydrogenase
M. abscessus ATCC 19977MAB_4911c-6e-5033.24% (343) acyl-CoA dehydrogenase FadE

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0159cfadE24e-5936.62% (385) acyl-CoA dehydrogenase FADE2
M. gilvum PYR-GCKMflv_0734-2e-6137.59% (399) acyl-CoA dehydrogenase domain-containing protein
M. tuberculosis H37RvRv0154cfadE24e-5936.62% (385) acyl-CoA dehydrogenase FADE2
M. leprae Br4923MLBr_00737fadE255e-3527.18% (390) putative acyl-CoA dehydrogenase
M. marinum MMMAR_0374fadE26e-6235.93% (398) acyl-CoA dehydrogenase FadE2
M. avium 104MAV_5144-8e-5835.43% (398) putative acyl-CoA dehydrogenase
M. smegmatis MC2 155MSMEG_0102-6e-5935.93% (398) putative acyl-CoA dehydrogenase
M. thermoresistible (build 8)TH_2913-6e-6536.25% (400) PUTATIVE acyl-CoA dehydrogenase domain protein
M. ulcerans Agy99MUL_4790fadE19e-5131.49% (397) acyl-CoA dehydrogenase FadE1
M. vanbaalenii PYR-1Mvan_0116-5e-6236.63% (404) acyl-CoA dehydrogenase domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0734|M.gilvum_PYR-GCK          -------------MDFAMSAKAQDYHDRLTDFMTEHVFPAEESYHSYRAE
Mvan_0116|M.vanbaalenii_PYR-1       MDLTVYTCHIVAVMDFSMSAKAQDYHDRLTDFMTESVFPAEESYHAYRAE
MSMEG_0102|M.smegmatis_MC2_155      ----------MAGMDFAMSAKAADYHKRLTDFMVEFVFPAEAEYHAYREE
Mb0159c|M.bovis_AF2122/97           -----------------MSAKAIDYRTRLSDFMTEHVFGAEADYDDYRRA
Rv0154c|M.tuberculosis_H37Rv        -----------------MSAKAIDYRTRLSDFMTEHVFGAEADYDDYRRA
MMAR_0374|M.marinum_M               -------MSYRGGMDFAMSAKAIDYHQRLSDFMTEYVFPAEADYDKYRED
MAV_5144|M.avium_104                -------------MDFAMSAKASDYHKRLTDFMTEHVFAAEAEYDKYRHE
TH_2913|M.thermoresistible__bu      ------------MWDFATEPEVERELEWIREFVKEEIEPLET------LD
MUL_4790|M.ulcerans_Agy99           ------------MWDFETDPEYQAKLDWVQEFMVNELEPLDL------VA
MAB_0328|M.abscessus_ATCC_1997      ------------MIDFSIPEELAAKAQRVREFVTETVIPYERD-----PR
MLBr_00737|M.leprae_Br4923          ----------MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAAD
                                                        .         ::        :         

Mflv_0734|M.gilvum_PYR-GCK          AGPKDHTVPPVVEELK--KQAKERGLWNLFLPSVSG---LSNLEYAPLAE
Mvan_0116|M.vanbaalenii_PYR-1       AGPDDHTVPPVVEELK--KLAKARGLWNLFLPSESG---LSNLEYAPLAE
MSMEG_0102|M.smegmatis_MC2_155      KGPKDHTVPPVVEELK--VKAKDRGLWNLFLPAESG---LTNLEYAPLAE
Mb0159c|M.bovis_AF2122/97           AGPADHTAPPIIEELK--TKAKDRGLWNLFLSAESG---LTNLEYAPLAE
Rv0154c|M.tuberculosis_H37Rv        AGPADHTAPPIIEELK--TKAKDRGLWNLFLSAESG---LTNLEYAPLAE
MMAR_0374|M.marinum_M               AGPNDHTVPPVVEELK--ANAKARGLWNLFLPAESG---LTNLEYAPLAE
MAV_5144|M.avium_104                AGPHDHTVPPVVEQLK--VKAKQQGLWNLFLPAESG---LTNLEYAPLAE
TH_2913|M.thermoresistible__bu      LD--DAAMTRAMEPLK--QQVKDRGLWAAHLPPELGGQGFGQVRLALMHE
MUL_4790|M.ulcerans_Agy99           LDPYDKKNPEMMAVLRPLQQVKNQGLWAAHLRPEVGGQGFGQVKLALLNE
MAB_0328|M.abscessus_ATCC_1997      LTAHGPTEELRDELVG---KARAAGLLTVQAPESYGGWGLSHIGQAVIFE
MLBr_00737|M.leprae_Br4923          VDQRARFPEEALAALN------ASGFNAIHVPEEYGGQGADSVAACIVIE
                                                  :         *:         *      :  . : *

Mflv_0734|M.gilvum_PYR-GCK          LTGWSMEIAPEATNCAAPDTGNMETLHLFATEEQRTQWLEPLLAGEIRSA
Mvan_0116|M.vanbaalenii_PYR-1       LTGWSMEIAPEATNCAAPDTGNMETLHLFATEEQRKQWLEPLLAGEIRSA
MSMEG_0102|M.smegmatis_MC2_155      ITGWSMEIAPEALNCQAPDTGNMETLHLFANEAQRKQWLEPLLAGEIRSA
Mb0159c|M.bovis_AF2122/97           MTGWSMEIAPEALNCAAPDTGNMEILHMFGTEQQRAQWLRPLLDGKIRSA
Rv0154c|M.tuberculosis_H37Rv        MTGWSMEIAPEALNCAAPDTGNMEILHMFGTEQQRAQWLRPLLDGKIRSA
MMAR_0374|M.marinum_M               LTGWSLEIAPEALNCAAPDTGNMEILHMFGTDEQRRQWLDPLLHGEIRSA
MAV_5144|M.avium_104                ITGWSLEIAPEALNCAAPDTGNMETLHLFATEEQRKQWLEPLLAGEIRSA
TH_2913|M.thermoresistible__bu      ILGRS-HLAPIVFGNQAPDSGNAELLAVAGTPEQKRRWLDPLLAGTIRSC
MUL_4790|M.ulcerans_Agy99           ILGRS-RWAPSVFGCQAPDSGNAEILALFGTEDQKARYLQPLLDGEITSC
MAB_0328|M.abscessus_ATCC_1997      AAGWS-TLGPIAMNCAAPDEGNMFLLGKITNEEQSEKFLRPVIEGYQRSA
MLBr_00737|M.leprae_Br4923          EVARVDASASLIP---AVNKLGTMGLILRGSEELKKQVLPSLAAEGAMAS
                                      .     ..      * :  .   *    .     : * .:      :.

Mflv_0734|M.gilvum_PYR-GCK          FAMTEPAVASSDARNIETTMLRDGDDYVINGRKWWITGAADPRCKILIVM
Mvan_0116|M.vanbaalenii_PYR-1       FAMTEPAVASSDARNIETTMLRDGDDYVINGRKWWITGAADPRCKILIVM
MSMEG_0102|M.smegmatis_MC2_155      FAMTEPAVASSDARNIETTMLRDGDHYVINGRKWWITGAADPRCKILIVM
Mb0159c|M.bovis_AF2122/97           FSMTEPAVASSDARNIETTISRDGADYVINGRKWWTSGAADPRCKILIVM
Rv0154c|M.tuberculosis_H37Rv        FSMTEPAVASSDARNIETTISRDGADYVINGRKWWTSGAADPRCKILIVM
MMAR_0374|M.marinum_M               FSMTEPAVASSDARNIETTISRDGADYIINGRKWWTSGAADPRCKILIVM
MAV_5144|M.avium_104                FSMTEPAVASSDARNIETSIVRDGADYVINGRKWWTSGAADPRCKILIVM
TH_2913|M.thermoresistible__bu      YAMTEPGAGA-DPTMLTTTARLAGDEWILNGRKWFASNAS--IADLFIVM
MUL_4790|M.ulcerans_Agy99           YSMTEPQGGS-DPGSFVTAATRDGDSWIINGEKWFSTNAK--HASFFIVM
MAB_0328|M.abscessus_ATCC_1997      FAMTEPDGAGSDPSQLKTSATFDGQNFVINGRKWLITGARG--AKTWIIM
MLBr_00737|M.leprae_Br4923          YALSE-REAGSDAASMRTRAKADGDDWILNGFKCWITNGG--KSTWYTVM
                                    ::::*   .. *.  : *     *  :::** *   :..    .    :*

Mflv_0734|M.gilvum_PYR-GCK          GRTNPDGPSHRQQSMILVPTDTPGVSIERSLPVFGW----QDQHG-HCEI
Mvan_0116|M.vanbaalenii_PYR-1       GRTNPDGPSHRQQSMILVPADTPGVDIQRSLPVFGW----QDQHG-HCEI
MSMEG_0102|M.smegmatis_MC2_155      GRTNPDAAAHQQQSMILVPVDTPGVDIQRSLPVFGW----QDQHG-HCEI
Mb0159c|M.bovis_AF2122/97           GRTNPDAAAHQQQSMVLVPIDTPGVTIVRSTPVFGW----QDRHG-HCEI
Rv0154c|M.tuberculosis_H37Rv        GRTNPDAAAHQQQSMVLVPIDTPGVTIVRSTPVFGW----QDRHG-HCEI
MMAR_0374|M.marinum_M               GRTNPDAAAHQQQSMILVPTDTPGVTIARSTPVFGW----QDQHG-HCEV
MAV_5144|M.avium_104                GRTNPDAASHQQQSMVLVPMDTPGVTVVRSTPVFGW----QDQHG-HCEI
TH_2913|M.thermoresistible__bu      AVTDPEAARHQRASMFLVPAGTPGLVVERDIPTMEHPYPRPPVYGNHAEV
MUL_4790|M.ulcerans_Agy99           AVTNPQARTYEKMSLFIVPAETPGIEIVRNVGVGTE----SSKHASHGYV
MAB_0328|M.abscessus_ATCC_1997      ANLEANDHLPEGPTLFLCDGETEGIVIERIMNTMDR----NYAEG-HAVV
MLBr_00737|M.leprae_Br4923          AVTDPDKGAN-GISAFIVHKDDEGFSIGPKEKKLGIK------GSPTTEL
                                    .  :.:       : .:      *. :                 .    :

Mflv_0734|M.gilvum_PYR-GCK          TFDNVRVPASNLLDEEGSGFAIAQARLGPGRIHHCMRAIGAAERALALMV
Mvan_0116|M.vanbaalenii_PYR-1       VFDNVRVPASNLLDEEGSGFAIAQARLGPGRIHHCMRAIGAAERALALMI
MSMEG_0102|M.smegmatis_MC2_155      VFNDVRVPAENLLDVEGSGFAIAQARLGPGRIHHCMRAIGAAERALTLMV
Mb0159c|M.bovis_AF2122/97           DYHNVRVPATNLLGEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMV
Rv0154c|M.tuberculosis_H37Rv        DYHNVRVPATNLLGEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMV
MMAR_0374|M.marinum_M               VYDNVRVPATNLLGEEGTGFAIAQARLGPGRIHHCMRALGGAERALALMV
MAV_5144|M.avium_104                VYDNVRVPVTNLLGEEGSGFAIAQARLGPGRIHHCMRALGGAERALALMV
TH_2913|M.thermoresistible__bu      SLTDVRVPAENLLGERGRGFALAQTRLGPGRIHHCMRWLGQSERALEMLC
MUL_4790|M.ulcerans_Agy99           RYHDVRVPADHVLGGEGQAFMTAQTRLGGGRIHHAMRTIALARRAFDMMC
MAB_0328|M.abscessus_ATCC_1997      RFDNLTLPREALLGETGQAFRYAQLRLAPARLTHCMRWLGAASRAQDIAV
MLBr_00737|M.leprae_Br4923          YFDKCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAI
                                       .  :*   ::.  * .*  *   *   *     : :. :  *     

Mflv_0734|M.gilvum_PYR-GCK          DRVQTRIAFGKPLAEQGVVREAIAKSRNDIEQTRMLCHKAAWTIDQHGNK
Mvan_0116|M.vanbaalenii_PYR-1       DRVQTRIAFGKPLAEQGVVREAIAKSRNEIEQTRLLCHKAAWTIDQQGNK
MSMEG_0102|M.smegmatis_MC2_155      DRVQKRVAFGKPLAEQGVVREAIAKSRNEIDQARLLCEKAAWTIDLQGNK
Mb0159c|M.bovis_AF2122/97           NRVRNRVAFGRPLAEQGVVQQAIAQSRNEIDQARLLCEKAAWTIDQHGNK
Rv0154c|M.tuberculosis_H37Rv        NRVRNRVAFGRPLAEQGVVQQAIAQSRNEIDQARLLCEKAAWTIDQHGNK
MMAR_0374|M.marinum_M               DRARNRVAFGRPLAEQGVVQQAIAKSRNEIDQARLLCEKAAWTIDRHGNK
MAV_5144|M.avium_104                DRAQKRVAFGRPLAEQGVVRESIAKSRNEIDQARLLCEKAAWTIDQHGNK
TH_2913|M.thermoresistible__bu      ERAVSRTIHGSLLSEKQMIQDWVAESVAERQAARLMTLHAAWKID-TEG-
MUL_4790|M.ulcerans_Agy99           ERAVSRQTRHGRLSDLQMTQEKVADSWIQIEQFRLLVLRTAWLID-KHHD
MAB_0328|M.abscessus_ATCC_1997      DYARTRTSFGKTIGEHQGVSFMLADNEIALHQCRLTIWHACWMMDNGAKG
MLBr_00737|M.leprae_Br4923          VYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPD
                                      .  *      :.        :*.     .  *:    :.   :     

Mflv_0734|M.gilvum_PYR-GCK          SKDAQLLVAQIKAVAPQMACDVIDRAIQVHGGAGVSDDFPLARLYSWHRA
Mvan_0116|M.vanbaalenii_PYR-1       SKDAQLLVAQIKAVAPQMACDVIDRAIQVHGGAGVCDDFPLARLYSWHRA
MSMEG_0102|M.smegmatis_MC2_155      --AAHVLVSQIKSVAPQVACNVLDRAIQVHGAAGVGDDFPLARLYAWHRA
Mb0159c|M.bovis_AF2122/97           --EARHLVAMIKAVAPRVACDVIDRAIQVHGAAGVSDDTPLARLYGWHRA
Rv0154c|M.tuberculosis_H37Rv        --EARHLVAMIKAVAPRVACDVIDRAIQVHGAAGVSDDTPLARLYGWHRA
MMAR_0374|M.marinum_M               --EARHLVAMIKAVAPQVACDVIDRAIQVHGAAGVSNDTPLARLYSWHRA
MAV_5144|M.avium_104                --AAHLLVSQIKAVAPKVACDVIDRAIQVHGAAGVSDDTVLARLYGWHRA
TH_2913|M.thermoresistible__bu      VRGALTEIAMIKYWGARVLYNVIDRAIQLHGSLGYSCDMPLEFMYRQARA
MUL_4790|M.ulcerans_Agy99           YQKVRRDIAAVKVAMPQVLHDVVQRAMHLHGALGVSDEMPFVKMMVAAES
MAB_0328|M.abscessus_ATCC_1997      ----RHESSMAKSFVSEELFKVTDRCVQVLGGIGISDETPVEMIFRDMRA
MLBr_00737|M.leprae_Br4923          ---LGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKI
                                            :  *   .    .*   .::: *. *   :  .  :    . 

Mflv_0734|M.gilvum_PYR-GCK          MRLFDGPDEVHMRTIARAELGREKSALATAACRVSHPGAAG---------
Mvan_0116|M.vanbaalenii_PYR-1       MRLFDGPDEVHMRTIARAELGREKSAMATAASRQSDTAASRQSNPAASRQ
MSMEG_0102|M.smegmatis_MC2_155      MRLFDGPDEVHMRTIARSELGREKSPLALAVTK-----------------
Mb0159c|M.bovis_AF2122/97           MRIFDGPDEVHLRSIARAELSREKSTFAAAVT------------------
Rv0154c|M.tuberculosis_H37Rv        MRIFDGPDEVHLRSIARAELSREKSTFAAAVT------------------
MMAR_0374|M.marinum_M               MRIFDGPDEVHMRSIARAELGREKSAFAAAVTSHG---------------
MAV_5144|M.avium_104                MRIFDGPDEVHMRTIARAELGREKSALAAAVTAHA---------------
TH_2913|M.thermoresistible__bu      ARLYDGPDEVHKVTVARRTLREFEPRE--VPSEHIPTRRAAAREKFAHLL
MUL_4790|M.ulcerans_Agy99           LGIADGATELHKMTVARRTLRQYEPVATPFPSQHIPTRRAAAEARLAERL
MAB_0328|M.abscessus_ATCC_1997      FRLYDGPTEVHKYAIGRQVLRTPRA-------------------------
MLBr_00737|M.leprae_Br4923          TQIYEGTNQIQRVVMSRALLR-----------------------------
                                      : :*. :::   :.*  *                              

Mflv_0734|M.gilvum_PYR-GCK          -------
Mvan_0116|M.vanbaalenii_PYR-1       SETAVTG
MSMEG_0102|M.smegmatis_MC2_155      -------
Mb0159c|M.bovis_AF2122/97           -------
Rv0154c|M.tuberculosis_H37Rv        -------
MMAR_0374|M.marinum_M               -------
MAV_5144|M.avium_104                -------
TH_2913|M.thermoresistible__bu      AETAANS
MUL_4790|M.ulcerans_Agy99           EHSIAEF
MAB_0328|M.abscessus_ATCC_1997      -------
MLBr_00737|M.leprae_Br4923          -------