For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4424 | - | - | 100% (540) | putative putative ABC transporter membrane-spanning protein |
M. thermoresistible (build 8) | TH_3461 | - | 2e-06 | 28.09% (388) | PUTATIVE putative Arsenical pump membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1249c | - | 6e-68 | 34.11% (557) | tetronasin-transport integral membrane protein ABC transporter |
M. gilvum PYR-GCK | Mflv_2196 | - | 0.0 | 61.58% (531) | putative ABC transporter membrane-spanning protein |
M. tuberculosis H37Rv | Rv1217c | - | 2e-68 | 34.29% (557) | tetronasin-transport integral membrane protein ABC transporter |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1358c | - | 1e-158 | 53.77% (530) | ABC transporter permease |
M. marinum M | MMAR_4221 | - | 2e-72 | 33.64% (544) | tetronasin-transport integral membrane protein ABC transporter |
M. avium 104 | MAV_1361 | - | 9e-66 | 32.85% (554) | ABC transporter membrane-spanning protein |
M. smegmatis MC2 155 | MSMEG_5076 | - | 0.0 | 61.85% (519) | ABC transporter membrane-spanning protein |
M. ulcerans Agy99 | MUL_4207 | - | 1e-05 | 25.69% (432) | hypothetical protein MUL_4207 |
M. vanbaalenii PYR-1 | Mvan_4500 | - | 0.0 | 61.63% (529) | putative ABC transporter membrane-spanning protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1249c|M.bovis_AF2122/97 -MSSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLS Rv1217c|M.tuberculosis_H37Rv -MSSTVIDRARPAGHRAPHRGSGFTGTLGLLRLYLRRDRVSLPLWVLLLS MMAR_4221|M.marinum_M -MSTTVLDRPSRPAHRGPQRASGLAGTLRLLRLYLRRDRVGLPLWVMLLS MAV_1361|M.avium_104 -MSATTLTRPSASASPAPLGGAHFSGTLQMLRLYLRRDRISLPLWVLLLS Mflv_2196|M.gilvum_PYR-GCK -MTTAGHLTHTRHAAPSAPSKSMWTHTGLLIRLALRRDRIRLSIWIAMLS Mvan_4500|M.vanbaalenii_PYR-1 MSTTAGLPTRGRHAAPAARSP--WTGTGDLIGLALRRDRVRLSVWIAALT MSMEG_5076|M.smegmatis_MC2_155 ----------------------MITGAGALVRLALRRDRVRLAVWIAVLT TH_4424|M.thermoresistible__bu -MSATVTARHARAARPATGST--LTGLGRLIALALRRDRIRLPVWVVVLT MAB_1358c|M.abscessus_ATCC_199 -MSTDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLT MUL_4207|M.ulcerans_Agy99 ---------------------------------------------MARVG : : Mb1249c|M.bovis_AF2122/97 VPLATVYIASVETVYPDRSARAAAAAAIMASPAQRALYGPVYNDSLGAVG Rv1217c|M.tuberculosis_H37Rv VPLATVYIASVETVYPDRSARAAAAAAIMASPAQRALYGPVYNDSLGAVG MMAR_4221|M.marinum_M VPLATVYVGSIQAVYPDQAARAVAAAAIMASPAQRALYGPVYNDSLGAVG MAV_1361|M.avium_104 VPLSTVYVGSIEKVYPTAAARAGFAASIMASPAQRALYGKVYSDSLGAVG Mflv_2196|M.gilvum_PYR-GCK LLMIYTPN-ALELAYPEEAQRL-ARVNLLKTPAGMMMGGPVFGVDETDLG Mvan_4500|M.vanbaalenii_PYR-1 AMTAYAPG-AIKLAYPEEAQRQ-ARVDLLKTPAGMMLGGPMFGGNETDLG MSMEG_5076|M.smegmatis_MC2_155 STMVYAPN-TIRMTYPDEAQRQ-SRVELLKTPAGMMLGGPMFGVNETDLG TH_4424|M.thermoresistible__bu VSIGYMPA-ALEMAYPDEVDRL-ARVNLMKNPAGIMFAGPMFGKNETALG MAB_1358c|M.abscessus_ATCC_199 LLMTYTPL-AFESMYPTTADRM-ARVTMMKTPAGIIMSGPSFGINETDVG MUL_4207|M.ulcerans_Agy99 TATAVTALCGYTVIYLAARDLA---------PSGFSVFGVFWG------- * *: . * :. Mb1249c|M.bovis_AF2122/97 IWKAG----MFHTLIAVAVILTVIRHTRADEESGRAELIDSTVVGRYTNL Rv1217c|M.tuberculosis_H37Rv IWKAG----MFHTLIAVAVILTVIRHTRADEESGRAELIDSTVVGRYANL MMAR_4221|M.marinum_M VWKAG----MFHTLIAVAVILTMIRHTRADEETGRAELVESTAVGRYANL MAV_1361|M.avium_104 IWKAG----MFHVLIAIAVILTVIRHTRADEENGRTELVDSTAIGRYAGL Mflv_2196|M.gilvum_PYR-GCK VMMANELMLTLIVATSILAILTVIRHTRAEEESGTAELVLASVVGRYART Mvan_4500|M.vanbaalenii_PYR-1 AMMANELMLTMIIATSILAILTVIRHTRAEEESGAAELVLASVVGRYART MSMEG_5076|M.smegmatis_MC2_155 AMMANELMLTLMVAASILSILTVIRHTRAEEESGAAELVLSSVVGRHART TH_4424|M.thermoresistible__bu AMVANEAMLTFIVAASILAILTVVRRTRAEEESGTAELVLAAPVGRHART MAB_1358c|M.abscessus_ATCC_199 VMVANELMTVMIAAAAIMSILTVIRHTRAEEESGAAELVMSAVIGHQART MUL_4207|M.ulcerans_Agy99 ----------AFGLVSGTANGLLQEATREVRSAQYLDVVPEGGRTHPLRI : : . ** .. ::: : Mb1249c|M.bovis_AF2122/97 TGALLLSFGASIATGAIGALGLLATDVAPAGSVAFGVALAASGMVFTAVA Rv1217c|M.tuberculosis_H37Rv TGALLLSFGASIATGAIGALGLLATDVAPAGSVAFGVALAASGMVFTAVA MMAR_4221|M.marinum_M TAALLLSFGASVATGAIGAAGLLTTDVPAAGSLAFGAALAASGLVFTSVA MAV_1361|M.avium_104 TAALTLSFAASIATGAIGAAGLLGTDVPAGGSLAFGAALAWSGLVFTAVA Mflv_2196|M.gilvum_PYR-GCK TAALSVAAGVNVVLTVTMTAAMVASGFGVSDSLGMCAGVTAVAMVFAAVA Mvan_4500|M.vanbaalenii_PYR-1 TAALILVAAVNVVLAVTTTAAMAAGGFGVVDSAAMCVGVTAVAMVFGAVA MSMEG_5076|M.smegmatis_MC2_155 TAALVLVAGVNVVLAVAMTLAMTVSGFAPADSAAMCFGVSGVAMVFGALA TH_4424|M.thermoresistible__bu VAAILLLAGVNAVLAVTLTAATAATGLPVVDSAAMSLGITGVAMVFGATA MAB_1358c|M.abscessus_ATCC_199 YAALIVVALMNAVLAVAMTAALSAADFDFINSLGISLGIIGASMVFAGLG MUL_4207|M.ulcerans_Agy99 AGMVGLASAVVIAGSSPLWSGRVFVEDRWLSVGLLSVGLAGFCLHATLLG . : : . . . : .: : . Mb1249c|M.bovis_AF2122/97 AVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGT---LSWCSPLGWS Rv1217c|M.tuberculosis_H37Rv AVAAQLSPSARFTRAVAFAVLGTAFALRAIGDAGSGT---LSWCSPLGWS MMAR_4221|M.marinum_M AVCAQLSPSARSCRSAAFAVLGTAFTLRAIGDAGSGA---LSWFSPLGWS MAV_1361|M.avium_104 AVTAQLSPSARFARGAAFAVLGTSFTVRAVGDAGPGG---LSWLSPLGWS Mflv_2196|M.gilvum_PYR-GCK AVTAQMWRAARAATGTAMAALALAALIRGIGDVIDNSGSALSWFSPIAWA Mvan_4500|M.vanbaalenii_PYR-1 AVTAQMWRAARAATGAAMATLALAALVRGIGDVIDNSGSVLSWFSPIAWA MSMEG_5076|M.smegmatis_MC2_155 ALTAQMWRQARAATGAAMAALGVAALIRGVGDVIDNSGSILSWFSPIAWA TH_4424|M.thermoresistible__bu AVTAQLWRTSRAATGAALGALAAAVVVRGVGDVINHSGSVVSWLSPVAWA MAB_1358c|M.abscessus_ATCC_199 AVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSWFSPLAWA MUL_4207|M.ulcerans_Agy99 MLAGTNRWSHYGSLMVTDAIIRVAVSAATF---------------AIGWG : . .: . : : . .:.*. Mb1249c|M.bovis_AF2122/97 LQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGT Rv1217c|M.tuberculosis_H37Rv LQVRPYAGERWWVLLLSLATAAVLTVLAYRLRAGRDVGAGLIAERPGAGT MMAR_4221|M.marinum_M LLVRPYAGERWWVLLLPLATTAALTVLAYRLRAGRDVGAGLIAERAGAGA MAV_1361|M.avium_104 LLVKPYAGDRWWVLVLHLVTTAGLTVLAYRLLAGRDVGAGLIAERPGPAT Mflv_2196|M.gilvum_PYR-GCK QQMRSFVDLRWWPLALLIGLTLALVTLAAALERRREYDDATLSSR-GEHP Mvan_4500|M.vanbaalenii_PYR-1 QQMRPFVELRWWPLALLSALSLTLVAIAAALEVQREYDDATIVSS-GESP MSMEG_5076|M.smegmatis_MC2_155 QQMRPFVALRCWPFALLVLLAVALIALAAVAEARRQYDDGTIPAT-GDRP TH_4424|M.thermoresistible__bu QQMRAFVEVRWWPLALLVLLTVVLLGAAAVLERSREYDAGTLPAG-GDRP MAB_1358c|M.abscessus_ATCC_199 QQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSR-GENP MUL_4207|M.ulcerans_Agy99 LVGFLWATVAGSVSWLILLLASPVARATARLLTPGNTATFLRGAAHSITA :. * : : : : . . Mb1249c|M.bovis_AF2122/97 AGPMLSEPFGLAWRLNRGS-LLLWTVGLCLYGLVMGSVVHGIGDQLGDNT Rv1217c|M.tuberculosis_H37Rv AGPMLSEPFGLAWRLNRGS-LLLWTVGLCLYGLVMGSVVHGIGDQLGDNT MMAR_4221|M.marinum_M AAPMLSNTFGLAWRLDRGA-LLLWTIGLCLYGLVMGSVVHGIGDQLGDNT MAV_1361|M.avium_104 AAPRLGNAFGLAWRLDRAA-LLLWTAGLALYGLLIGSVVHGIGDELGDSG Mflv_2196|M.gilvum_PYR-GCK GARPVRGVLALHLVLQRGQ-TIGWSAGLFIAGLAFGSMTKSLLDAAEGNE Mvan_4500|M.vanbaalenii_PYR-1 NARPIRGVLALHLRLQRGQ-TLGWSVGLFAAGLAFGSMTKSLLEAAHDNE MSMEG_5076|M.smegmatis_MC2_155 DAAPITGVLGLHLRLHRGQ-TIAWGAGLFVAGLAFGSMTKSLMDAAQTNE TH_4424|M.thermoresistible__bu GAPPIRGVFGLQLVLQRGQ-LIGWSVGLFLGGLTFGSLTQAMLDIAEENE MAB_1358c|M.abscessus_ATCC_199 NAPEIKTVVGLNGQLQRGL-ITGWGFGVFLGGMAFGSMAKSLRDSIDTNP MUL_4207|M.ulcerans_Agy99 AGASAILVMGFPVLLKLTSNELGPQGGVIILAVTLTRAPLLVPLTAMQGN . ..: *. *: .: : : . Mb1249c|M.bovis_AF2122/97 AVRDIVTRMGGTGALEQAFLALAFTMIGMVAAAFAVSLTLRLHQEETGLR Rv1217c|M.tuberculosis_H37Rv AVRDIVTRMGGTGALEQAFLALAFTMIGMVAAAFAVSLTLRLHQEETGLR MMAR_4221|M.marinum_M AVREIVTRMGGTAALEEAFVTLAFTLVGMVAAAFAISLTLRLHQEETGQR MAV_1361|M.avium_104 QARDIVARMGGTSALEDAFIAVAFAMMGMVAAAFAVSLTLRLHQEESSQR Mflv_2196|M.gilvum_PYR-GCK LIAQMISAQG-----TDGVYMTMSQFLAAAASAYVVACVLRLHADERSGL Mvan_4500|M.vanbaalenii_PYR-1 LLARIVSTQG-----LDGVYTTMTQFLAAAAGAYVVSAVLRVFADEQSGL MSMEG_5076|M.smegmatis_MC2_155 LIAQVLAAQG-----PDGAYTTMTQFLAAAAAAYTVSGVLRLYDDEQNGR TH_4424|M.thermoresistible__bu LVAAMLAAHG-----NAGIFTTMTQFLAAATTAFIAITVLRLRSDEQSGL MAB_1358c|M.abscessus_ATCC_199 LLARAFTAHG-----LDSIFATFNQVLAIAVTAYAVSAILRLAKDEQSGI MUL_4207|M.ulcerans_Agy99 LIAHFVDESA-------------QRLRALISPAALIGGIGVIGVLAAGAV . . . . * : . Mb1249c|M.bovis_AF2122/97 AETLLAGAVSRTHWLASHLAMALAGSAVATLISGVAAGLAYGMTVGDVGG Rv1217c|M.tuberculosis_H37Rv AETLLAGAVSRTHWLASHLAMALAGSAVATLISGVAAGLAYGMTVGDVGG MMAR_4221|M.marinum_M AEPLLAGSVSRTRWLSSHLVMALAGSAVATVLSGLVAGIAYGIAAGDVGA MAV_1361|M.avium_104 AETVLASAVSRTRWLASHLVIALAGSGVAMLASGTVAGLVYGIAAGDVGG Mflv_2196|M.gilvum_PYR-GCK GESVLAGAVSRWRWLSTSVVAAVLGATVLMFFAGLGNGVGAGITLGEP-G Mvan_4500|M.vanbaalenii_PYR-1 GEAVLAGAVSRPRWLSTAVLSAVLGASVLMFFAGLGNGLGAGVTLGEP-A MSMEG_5076|M.smegmatis_MC2_155 AEAVLAGPVSRWRWLLGATVAAVLGSAVVLLCAGVGNGLGAGLTLGDL-P TH_4424|M.thermoresistible__bu AEPVLAGSVSRWQWLLSTVAATLLGAATLLFFAGLGNGLGAGIALGDP-G MAB_1358c|M.abscessus_ATCC_199 TEAVLARAVSRWTWLLSAVAMTALGSALLMTIAGLGAGLGAASTLHDP-D MUL_4207|M.ulcerans_Agy99 GPWLLRSAFGQQYQASGSLLAWLTAAAVAIAMLTLTG------------- :* ...: .: Mb1249c|M.bovis_AF2122/97 KLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWGVLVGFIALYLL Rv1217c|M.tuberculosis_H37Rv KLPTVVGTAAVQLPAVWLLSAVTVGLFGLAPRFTPVAWGVLVGFIALYLL MMAR_4221|M.marinum_M KLATVVGAAAVQLPAVWLLAAVAVGLFGLAPRFTPVVWGVLIGFVALYLL MAV_1361|M.avium_104 KLAMVVASAAVQLPAVWLLSAVTVCVFGVAPRFAPVAWGVLIGFVALYLI Mflv_2196|M.gilvum_PYR-GCK TVGRLTVAGLAFVPALAVMAGVAA--VGVALRQPWIGWLAVASVVLSLYL Mvan_4500|M.vanbaalenii_PYR-1 TVLRLTVAGLAFVPALAVLAGVAA--LAVALRQSWIGWLAVTFVVASLYL MSMEG_5076|M.smegmatis_MC2_155 TVGRLALAALAYLPALAVMAAVAT--LAVALRTPWIAWLAVAFVIVALYL TH_4424|M.thermoresistible__bu TVGELVLSALAHLPAMAVMTGIAA--LAFALRMNWIAWLTVTFVIVSLYM MAB_1358c|M.abscessus_ATCC_199 LVWRLILAGLAQIPALLVVCGIAA--VAVALRQSWIGWVVVAFSVGMLYA MUL_4207|M.ulcerans_Agy99 --AAAVAAALHRAYSLGWVSATAASGLLLLLPLPLEAR-----TVVALLC :. :: : . :. . . : Mb1249c|M.bovis_AF2122/97 GSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMAF Rv1217c|M.tuberculosis_H37Rv GSLAGFPQMLLNLEPFAHIPRVGGGDFTAVPLLWLLAIDAALITLGAMAF MMAR_4221|M.marinum_M GSLAGFPQWLLDLEPFAHVPRIG-RDFTAVPLLWLLAIDITLILLGALAL MAV_1361|M.avium_104 GSLAGFSQWLLDLEPFAHIPRVG-ADFTAVPLLWLLAIDIGLTILGAMAF Mflv_2196|M.gilvum_PYR-GCK GALLRLPRWLIDLSPVSRTTVPT--DVPVVALVVMCVAAATLTVLAGFLY Mvan_4500|M.vanbaalenii_PYR-1 GALLRLPGWLLDLSPVAQTSYPA--DVPALGWFVMCCAAAALTVFAAVRY MSMEG_5076|M.smegmatis_MC2_155 GALLRLPRWLLDLSPVGRTTAPM--DYPVTALFVMAVVAVLLACAAGGLY TH_4424|M.thermoresistible__bu GALLRVPQWLLDLSPVTRIKVPM--ETSVTTMVVMVLIGAALTATAGWRY MAB_1358c|M.abscessus_ATCC_199 G-ILQLPTWMVKLSPVMRVSAPV--EYPWLTMSLLIVLGAGLAAAAGALY MUL_4207|M.ulcerans_Agy99 GPLVGIGVHLLALARAGYASR----------------------------- * : . :: * Mb1249c|M.bovis_AF2122/97 RRRDVRC Rv1217c|M.tuberculosis_H37Rv RRRDVRC MMAR_4221|M.marinum_M RRRDLRC MAV_1361|M.avium_104 RRRDLRC Mflv_2196|M.gilvum_PYR-GCK RRRDAA- Mvan_4500|M.vanbaalenii_PYR-1 RHRDAV- MSMEG_5076|M.smegmatis_MC2_155 RRRDAV- TH_4424|M.thermoresistible__bu RGRDAL- MAB_1358c|M.abscessus_ATCC_199 RRRDAI- MUL_4207|M.ulcerans_Agy99 -------