For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4404 | - | - | 100% (162) | - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2054 | - | 9e-12 | 30.77% (156) | hypothetical protein MAB_2054 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_3006 | - | 4e-06 | 28.24% (131) | hypothetical protein MAV_3006 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3823 | - | 8e-05 | 28.23% (124) | hypothetical protein MUL_3823 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
TH_4404|M.thermoresistible__bu --VSMITDRLADAVGVWHEEGPPSFPIDRSDIRRWAIATYWPEEPPRLYW
MAB_2054|M.abscessus_ATCC_1997 ------MTRVADASLIGTQLGSTTFPVDRSKVREFALS---LDDHDPIYQ
MAV_3006|M.avium_104 ------MVDAESAARVGTVAASATGEVNQRDWQRWAAA---VGDHNPLYF
MUL_3823|M.ulcerans_Agy99 MGYRLAFGTYQDALQMVGTTSPPRTAATAVSGARIQLFAALVHDGNRSYW
.* : ... . . : *
TH_4404|M.thermoresistible__bu DEEYAKTTRWGGLIAPADFNPFAWPVTR-----GDDGPSALVMPAPGEP-
MAB_2054|M.abscessus_ATCC_1997 DAAAARAAGFGAIPAPPTFVVSSAHWRA-----DDD-----MFGALGLD-
MAV_3006|M.avium_104 DPDYARANGFRDIICPPLFLQYAILGVSRLDSLRPDGSSGAVSGSLAFPR
MUL_3823|M.ulcerans_Agy99 DEDYARAH-WGGLLAPPALLMGWLTTPPWQP--AERDSAGSLALRVPLP-
* *:: : : .*. : :
TH_4404|M.thermoresistible__bu GQRMLNGGVAFQYGVPMRPGDVIRGRWRIKDATERAG-RLGQMLYIRLER
MAB_2054|M.abscessus_ATCC_1997 LRRVLHGECGWEYFAPVVVGDELTETRRVSNVTSREGKRGGTMTIVTIET
MAV_3006|M.avium_104 APKRMAGGESFTFHLPAYHRDRVDMVRTIASIVEKQG-RSGRFVLVTWHT
MUL_3823|M.ulcerans_Agy99 GTAFINAANDVEFLQPIVEGDRLCVVEQLVSVSPEKRTRLGVGHFVETLE
: . : * * : : . . * * :
TH_4404|M.thermoresistible__bu QLHNQHDEWVRTRVDTLIRY------
MAB_2054|M.abscessus_ATCC_1997 DFTNQRDELVVRQTDVLIETGGSTQ-
MAV_3006|M.avium_104 VYRNQHDELLAEASTSMIARP-----
MUL_3823|M.ulcerans_Agy99 TYRRQDAVVVARSRNTLFRFTPGPSS
.* : ::