For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4340 | - | - | 100% (345) | putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_5124 | - | 9e-64 | 43.55% (349) | hypothetical protein Mflv_5124 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1894c | - | 3e-28 | 29.34% (351) | hypothetical protein MAB_1894c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1333 | - | 2e-73 | 49.24% (327) | hypothetical protein MSMEG_1333 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1227 | - | 7e-68 | 44.96% (347) | hypothetical protein Mvan_1227 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5124|M.gilvum_PYR-GCK -MKNIALCFDRDRDGVAES--TNASV--SAVLLQRSADQIVWSPTCPGHR
Mvan_1227|M.vanbaalenii_PYR-1 -MKNIALCFGGD---------TNAAV--LAALLRRDGGQTVWSCSRAQPA
TH_4340|M.thermoresistible__bu -VKNIVLCFD-SGWGGPGSRATNVLE--LRRLLDDTDSQLVWWHPIGAAW
MSMEG_1333|M.smegmatis_MC2_155 -MKNIALCFDQSGEQSASGADTNIKA--LLALLDDS-AALTWYH-CARKL
MAB_1894c|M.abscessus_ATCC_199 MAKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTD
***.:**. ** : :
Mflv_5124|M.gilvum_PYR-GCK -RGAFGA----------GHTALDAARAAVAGAYGFLVDEWAPGDRLFLFG
Mvan_1227|M.vanbaalenii_PYR-1 GRVRPGA----------GRAELAAARAAVAEAYQFLVETWEPGDRLFLFG
TH_4340|M.thermoresistible__bu LRMRR-------------RRAISDAQTAVVGGYRVIADSWQRGDRIFLFG
MSMEG_1333|M.smegmatis_MC2_155 PVYRR-------------VTAVSEARTAVVEAYNFLRDAWKPGDRIFLFG
MAB_1894c|M.abscessus_ATCC_199 PVVGTYTPGGQFIARLLGVTFGIGLRAKLAQAYTYLIERWEPGDRIFIFG
:: :. .* : : * ***:*:**
Mflv_5124|M.gilvum_PYR-GCK AGRGAVSAYALARLLGTVGVLNGDVPGWTTDDFREYALSTYALPRTPRDA
Mvan_1227|M.vanbaalenii_PYR-1 AGRGAACARALARLLGTFGVLGDDVPGWTVEDFREYVLATYAMPRTRRDN
TH_4340|M.thermoresistible__bu AGYGGYCARALSRLLDTVGVLPDRCHH-----LLDYALATYALPRQGRTP
MSMEG_1333|M.smegmatis_MC2_155 AGTGGHLAGELANLLGTVGLVPATFDDP--LGLVDYALSTYVLPRTPRTI
MAB_1894c|M.abscessus_ATCC_199 FSRGAFCARGLAGLLNSVGMLRAGSQN-----LVPYAVSLYAQSCTDWSA
. *. * *: **.:.*:: : *.:: *. .
Mflv_5124|M.gilvum_PYR-GCK ADWRRIAGVVAGLSDRDD--VAVEVAFLGLWDCVAPAGFARAGAVG----
Mvan_1227|M.vanbaalenii_PYR-1 TDWEHVGRLAAEFSGGAD--LAVAVEYLGLWDTFAVPGLPRPQACD----
TH_4340|M.thermoresistible__bu QEWRQVTELTEILAGRSA--LSVPVHFLGLWDSVRIPGLP-RSAAG----
MSMEG_1333|M.smegmatis_MC2_155 SDWHRVSSVTAGLLGDGT--SSVLVRFLGLWDATAIPGT--HGEPG----
MAB_1894c|M.abscessus_ATCC_199 ERWDELHSFSRTVARREDGKFSIPVAYLGLWDTVSAPGIFKRSMQWPYAP
* .: . . :: * :***** .*
Mflv_5124|M.gilvum_PYR-GCK RLPTVRSARHAVAIDGG-------YPHPGPQLLGGAAGGGVEEVWFRGTH
Mvan_1227|M.vanbaalenii_PYR-1 PTPNVLAARHAVAIDG--------HGHRGPQLLDRGADR-VQEVWFRGAH
TH_4340|M.thermoresistible__bu LPANVRIARHAVAIDGSAFGEIVGDGPTDRTAGSDHIGDHIEEVWFRGVH
MSMEG_1333|M.smegmatis_MC2_155 LLTNVEHGRHAVAID-----------APHRVMHHDAR---LDEVWFRGSH
MAB_1894c|M.abscessus_ATCC_199 SVPNALAGRHAVAIDERR------RPYREYLIKFLGDQRLVDEAWFAGIH
... .******* ::*.** * *
Mflv_5124|M.gilvum_PYR-GCK GDVTGGRGARPWLAGVALDWVLDGAVRAGAALRQCPERYAT-RGADALAG
Mvan_1227|M.vanbaalenii_PYR-1 CDVAGEPGACSALSGIALDWILDGAVRAGAAVCEPPCQLPP-HALDALAG
TH_4340|M.thermoresistible__bu ADVAGGPGGCRPLANIALHWVLDGAVRAGLEVSPIRRPAPVLGESDAVAG
MSMEG_1333|M.smegmatis_MC2_155 CDVTGGHGACAPLAEIALDWVLDGAVAAGLPAR-ERDFAP--GDVEALAG
MAB_1894c|M.abscessus_ATCC_199 SDIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMG
*: * . *: :**.*:::**. * *
Mflv_5124|M.gilvum_PYR-GCK GVP---------AVTFRKVPEEATVHASVQCFLRAHPSYWRRLPSRVVWA
Mvan_1227|M.vanbaalenii_PYR-1 SAH---------IVAFRKVPADAAVHASVACFLRAHPSYWHRLPAHVVWA
TH_4340|M.thermoresistible__bu HTP---------TGGLRRLPPAPHIHDSVRVYLRRHPGYWRRLPATFCWA
MSMEG_1333|M.smegmatis_MC2_155 SSP---------TVGIRRLPFDARVHASVGVYLRSHPKYWRRFPARIEWA
MAB_1894c|M.abscessus_ATCC_199 RIHRVSWLWALLLFRRRRIPDGAWIHASVADRMAQDSTYRPALPEHSTVI
*::* . :* ** : .. * :*
Mflv_5124|M.gilvum_PYR-GCK DPDWDARSERLVPGSAAPP-PAAEIPALVAAS--
Mvan_1227|M.vanbaalenii_PYR-1 DLDWVARSERLIPVPAPPPNPAPEIPALATAG--
TH_4340|M.thermoresistible__bu DPDWAARGERLLPTPRRVRVPAADRALAHSAV--
MSMEG_1333|M.smegmatis_MC2_155 DTEWSARGERLASAISHTPATEEATREELTAVAS
MAB_1894c|M.abscessus_ATCC_199 DAQWSTPATDIRL---------------------
* :* : . :