For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KNIALCFGGDTNAAVLAALLRRDGGQTVWSCSRAQPAGRVRPGAGRAELAAARAAVAEAYQFLVETWEPG DRLFLFGAGRGAACARALARLLGTFGVLGDDVPGWTVEDFREYVLATYAMPRTRRDNTDWEHVGRLAAEF SGGADLAVAVEYLGLWDTFAVPGLPRPQACDPTPNVLAARHAVAIDGHGHRGPQLLDRGADRVQEVWFRG AHCDVAGEPGACSALSGIALDWILDGAVRAGAAVCEPPCQLPPHALDALAGSAHIVAFRKVPADAAVHAS VACFLRAHPSYWHRLPAHVVWADLDWVARSERLIPVPAPPPNPAPEIPALATAG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1227 | - | - | 100% (335) | hypothetical protein Mvan_1227 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_5124 | - | 1e-103 | 59.77% (343) | hypothetical protein Mflv_5124 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1894c | - | 9e-34 | 34.42% (276) | hypothetical protein MAB_1894c |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1333 | - | 3e-68 | 43.84% (349) | hypothetical protein MSMEG_1333 |
M. thermoresistible (build 8) | TH_4340 | - | 5e-68 | 44.96% (347) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1227|M.vanbaalenii_PYR-1 -MKNIALCFGGD---------TNAAV--LAALLRRDGGQTVWSCSRAQPA Mflv_5124|M.gilvum_PYR-GCK -MKNIALCFDRDRDGVAES--TNASV--SAVLLQRSADQIVWSPTCPGHR MSMEG_1333|M.smegmatis_MC2_155 -MKNIALCFDQSGEQSASGADTNIKA--LLALLDDS-AALTWYH-CARKL TH_4340|M.thermoresistible__bu -VKNIVLCFD-SGWGGPGSRATNVLE--LRRLLDDTDSQLVWWHPIGAAW MAB_1894c|M.abscessus_ATCC_199 MAKNIVICFDGTGNQIRASGNTNVVRGYDMMVHDLTDRQISYYDPGVGTD ***.:**. ** : : Mvan_1227|M.vanbaalenii_PYR-1 GRVRPGA----------GRAELAAARAAVAEAYQFLVETWEPGDRLFLFG Mflv_5124|M.gilvum_PYR-GCK -RGAFGA----------GHTALDAARAAVAGAYGFLVDEWAPGDRLFLFG MSMEG_1333|M.smegmatis_MC2_155 PVYRR-------------VTAVSEARTAVVEAYNFLRDAWKPGDRIFLFG TH_4340|M.thermoresistible__bu LRMRR-------------RRAISDAQTAVVGGYRVIADSWQRGDRIFLFG MAB_1894c|M.abscessus_ATCC_199 PVVGTYTPGGQFIARLLGVTFGIGLRAKLAQAYTYLIERWEPGDRIFIFG :: :. .* : : * ***:*:** Mvan_1227|M.vanbaalenii_PYR-1 AGRGAACARALARLLGTFGVLGDDVPGWTVEDFREYVLATYAMPRTRRDN Mflv_5124|M.gilvum_PYR-GCK AGRGAVSAYALARLLGTVGVLNGDVPGWTTDDFREYALSTYALPRTPRDA MSMEG_1333|M.smegmatis_MC2_155 AGTGGHLAGELANLLGTVGLVPATFDDP--LGLVDYALSTYVLPRTPRTI TH_4340|M.thermoresistible__bu AGYGGYCARALSRLLDTVGVLPDRCHH-----LLDYALATYALPRQGRTP MAB_1894c|M.abscessus_ATCC_199 FSRGAFCARGLAGLLNSVGMLRAGSQN-----LVPYAVSLYAQSCTDWSA . *. * *: **.:.*:: : *.:: *. . Mvan_1227|M.vanbaalenii_PYR-1 TDWEHVGRLAAEFSGGAD--LAVAVEYLGLWDTFAVPGLPRPQACD---- Mflv_5124|M.gilvum_PYR-GCK ADWRRIAGVVAGLSDRDD--VAVEVAFLGLWDCVAPAGFARAGAVG---- MSMEG_1333|M.smegmatis_MC2_155 SDWHRVSSVTAGLLGDGT--SSVLVRFLGLWDATAIPGT--HGEPG---- TH_4340|M.thermoresistible__bu QEWRQVTELTEILAGRSA--LSVPVHFLGLWDSVRIPGLP-RSAAG---- MAB_1894c|M.abscessus_ATCC_199 ERWDELHSFSRTVARREDGKFSIPVAYLGLWDTVSAPGIFKRSMQWPYAP * .: . . :: * :***** .* Mvan_1227|M.vanbaalenii_PYR-1 PTPNVLAARHAVAIDG--------HGHRGPQLLDRGADR-VQEVWFRGAH Mflv_5124|M.gilvum_PYR-GCK RLPTVRSARHAVAIDGG-------YPHPGPQLLGGAAGGGVEEVWFRGTH MSMEG_1333|M.smegmatis_MC2_155 LLTNVEHGRHAVAID-----------APHRVMHHDAR---LDEVWFRGSH TH_4340|M.thermoresistible__bu LPANVRIARHAVAIDGSAFGEIVGDGPTDRTAGSDHIGDHIEEVWFRGVH MAB_1894c|M.abscessus_ATCC_199 SVPNALAGRHAVAIDERR------RPYREYLIKFLGDQRLVDEAWFAGIH ... .******* ::*.** * * Mvan_1227|M.vanbaalenii_PYR-1 CDVAGEPGACSALSGIALDWILDGAVRAGAAVCEPPCQLPP-HALDALAG Mflv_5124|M.gilvum_PYR-GCK GDVTGGRGARPWLAGVALDWVLDGAVRAGAALRQCPERYAT-RGADALAG MSMEG_1333|M.smegmatis_MC2_155 CDVTGGHGACAPLAEIALDWVLDGAVAAGLPAR-ERDFAP--GDVEALAG TH_4340|M.thermoresistible__bu ADVAGGPGGCRPLANIALHWVLDGAVRAGLEVSPIRRPAPVLGESDAVAG MAB_1894c|M.abscessus_ATCC_199 SDIGGDYADDDRLSDIALKWVIEGAAEHGLLLNIEKYQRYCSVEPTYAMG *: * . *: :**.*:::**. * * Mvan_1227|M.vanbaalenii_PYR-1 SAH---------IVAFRKVPADAAVHASVACFLRAHPSYWHRLPAHVVWA Mflv_5124|M.gilvum_PYR-GCK GVP---------AVTFRKVPEEATVHASVQCFLRAHPSYWRRLPSRVVWA MSMEG_1333|M.smegmatis_MC2_155 SSP---------TVGIRRLPFDARVHASVGVYLRSHPKYWRRFPARIEWA TH_4340|M.thermoresistible__bu HTP---------TGGLRRLPPAPHIHDSVRVYLRRHPGYWRRLPATFCWA MAB_1894c|M.abscessus_ATCC_199 RIHRVSWLWALLLFRRRRIPDGAWIHASVADRMAQDSTYRPALPEHSTVI *::* . :* ** : .. * :* Mvan_1227|M.vanbaalenii_PYR-1 DLDWVARSERLIPVPAPPPNPAPEIPALATAG-- Mflv_5124|M.gilvum_PYR-GCK DPDWDARSERLVPGSAAPP-PAAEIPALVAAS-- MSMEG_1333|M.smegmatis_MC2_155 DTEWSARGERLASAISHTPATEEATREELTAVAS TH_4340|M.thermoresistible__bu DPDWAARGERLLPTPRRVRVPAADRALAHSAV-- MAB_1894c|M.abscessus_ATCC_199 DAQWSTPATDIRL--------------------- * :* : . :