For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4030 | - | - | 100% (355) | putative conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_4420 | - | 7e-59 | 40.78% (358) | PUTATIVE putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0043 | - | 1e-52 | 38.97% (349) | hypothetical protein Mflv_0043 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0657 | - | 8e-76 | 44.79% (355) | hypothetical protein MAB_0657 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6607 | - | 5e-38 | 35.94% (345) | hypothetical protein MSMEG_6607 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0875 | - | 7e-53 | 38.42% (354) | hypothetical protein Mvan_0875 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0043|M.gilvum_PYR-GCK MTFDPVMPGIVLAVAAATLLALRAVALLPA-----ARAGRTSVARWAVTT
Mvan_0875|M.vanbaalenii_PYR-1 MTFDPVLPPAVLAVVAVALVGLRAVALRRA-----AGAGHRALLRWTTTT
MSMEG_6607|M.smegmatis_MC2_155 MSLHPVLPPLVLAVLAAAVLAARITTWR---------TGGVTRWRWAGLT
TH_4030|M.thermoresistible__bu MTYQPVLAPVVLIAIAIGLILVRMVGLYRALVRTGTGHYRTMVLRWGGLT
MAB_0657|M.abscessus_ATCC_1997 MTFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLT
*: .**:. :: . * :: * ** *
Mflv_0043|M.gilvum_PYR-GCK VALLLLVLAAARPVTGSAA-----GEQNAQRPQAGANIYFLVDRSSDSAI
Mvan_0875|M.vanbaalenii_PYR-1 VAMLLLLVAAARPGSGAAV-----EPGSGQPRQAGANVYFVVDRSEDSAL
MSMEG_6607|M.smegmatis_MC2_155 TAAFLLLVAALRPTFGDDG-----QESVRAAGDREPNVFVLVDRSPAMAR
TH_4030|M.thermoresistible__bu LAVLALVFAATRPGFDLDDGEPPDQRPKAVALDPNLNVFFVVDRSVDSRV
MAB_0657|M.abscessus_ATCC_1997 LVIVSVFAAAARPGIEPTR-HVLTESHAVAAANSNVNVFFVVDRSINSRA
. . :. ** ** : *::.:****
Mflv_0043|M.gilvum_PYR-GCK PDFGDAP-RITAMRSDIEEVIRAHPDARFAIIGFAARPSIDWPLSADTWS
Mvan_0875|M.vanbaalenii_PYR-1 TDLDGTQ-RMSKMRRDIDELITAHPGARFAVIAFASRPAIEWPLSEDTWS
MSMEG_6607|M.smegmatis_MC2_155 --------HMAAARDDITQLIDRHPDARFAVITFTSRPTVTWPLSADTWS
TH_4030|M.thermoresistible__bu EDYGDRESRMAGIRADMEALVNEFPRARFALISFAAKASLEWPLSDDSWS
MAB_0657|M.abscessus_ATCC_1997 EDYGSGQFRMAGIRADMDAVVNQYPQGRFSITSFATGARVDWPLSEDIWS
::: * *: :: .* .**:: *:: . : **** * **
Mflv_0043|M.gilvum_PYR-GCK LQPAVDALTPYPGID---SAEVNAAAAANILRYQLISAGQQFPQAENLVY
Mvan_0875|M.vanbaalenii_PYR-1 LAPVVDALTPYAGLTA-ASANVNAGAAANVLRYQLIAAGQQYPHAPNLVY
MSMEG_6607|M.smegmatis_MC2_155 LRPVVAALGTDTGAD---AEQANVGAAGNVLRYQLISAQQQFPRAANLVY
TH_4030|M.thermoresistible__bu LVSKIRGLSPYTLVAPDAMVRVDPAAAREVLGRQLRQASELFPESKNLVF
MAB_0657|M.abscessus_ATCC_1997 LRALLKGYSAY-VSELDSVYRVEVAAAADELRGQLELARRQYPGSSNVVF
* . : . . ..: .** : * ** * . :* : *:*:
Mflv_0043|M.gilvum_PYR-GCK YLGSGAGESTVPQGVFD-TPR--IDDGAVLGYGTGPG-------------
Mvan_0875|M.vanbaalenii_PYR-1 YLGSGAPESSVPQGTFD-TGP--VDGGAVLGYGGG---------------
MSMEG_6607|M.smegmatis_MC2_155 YLGAGAPGSQAPQREFD-LPEGAVDGGAVLGFGGAG--------------
TH_4030|M.thermoresistible__bu YLGEGGPGSRVRDTSFDDIPDGAIAGGAVLGYGTDAGGPIP-QGWIDGNK
MAB_0657|M.abscessus_ATCC_1997 YLGEGAGASRQPAKSFD-IPADLVDGGAVLGYGTTDGGAVASQLAANGEK
*** *. * ** : .*****:*
Mflv_0043|M.gilvum_PYR-GCK -----------------EARLREIAAQLGLPYVPRRDGAELPSDRAPESG
Mvan_0875|M.vanbaalenii_PYR-1 ------------------AALRDIAGQLGLPYVQRGVGEALPRPDSAEA-
MSMEG_6607|M.smegmatis_MC2_155 -----------------AQRLRAVADQIGVPYADD------LSDVPADAA
TH_4030|M.thermoresistible__bu VYFSDPATNAPANSAIDESRLKQIASDLGVPYLHRAAGQSITPAVPAVES
MAB_0657|M.abscessus_ATCC_1997 TYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPALDP
*: :* :: : * ..
Mflv_0043|M.gilvum_PYR-GCK TATATDP----ATAPQPTELYWVLTMLATALLLVEIYLTTRDLRRTRAVR
Mvan_0875|M.vanbaalenii_PYR-1 SAEPGDP----AATDGRVEYYWAFTMLAALLLLIEIFLTTRDLLRARATR
MSMEG_6607|M.smegmatis_MC2_155 DSAAGTP----AAGASRVEIYWLPAGIAAILVLAELYLVLRELRRN--TE
TH_4030|M.thermoresistible__bu ASPESDDDLHGSKFVERRELYWIFSLLASVLVLVEIVLTIREFRRNRMSR
MAB_0657|M.abscessus_ATCC_1997 SAATSEQ-RSISLPGSRTEFYWVFTGIAMVLMFYELFAMVREYRTSRITR
: : * ** : :* *:: *: *: .
Mflv_0043|M.gilvum_PYR-GCK RQAPS
Mvan_0875|M.vanbaalenii_PYR-1 REVPT
MSMEG_6607|M.smegmatis_MC2_155 TVVPA
TH_4030|M.thermoresistible__bu MRVQT
MAB_0657|M.abscessus_ATCC_1997 VRPT-