For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTFDPVMPGIVLAVAAATLLALRAVALLPAARAGRTSVARWAVTTVALLLLVLAAARPVTGSAAGEQNAQ RPQAGANIYFLVDRSSDSAIPDFGDAPRITAMRSDIEEVIRAHPDARFAIIGFAARPSIDWPLSADTWSL QPAVDALTPYPGIDSAEVNAAAAANILRYQLISAGQQFPQAENLVYYLGSGAGESTVPQGVFDTPRIDDG AVLGYGTGPGEARLREIAAQLGLPYVPRRDGAELPSDRAPESGTATATDPATAPQPTELYWVLTMLATAL LLVEIYLTTRDLRRTRAVRRQAPS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0043 | - | - | 100% (304) | hypothetical protein Mflv_0043 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0657 | - | 4e-42 | 33.82% (346) | hypothetical protein MAB_0657 |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_6607 | - | 2e-61 | 45.95% (296) | hypothetical protein MSMEG_6607 |
M. thermoresistible (build 8) | TH_4420 | - | 4e-76 | 49.06% (320) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0875 | - | 4e-98 | 61.36% (308) | hypothetical protein Mvan_0875 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0043|M.gilvum_PYR-GCK MTFDPVMPGIVLAVAAATLLALRAVALLPAA-----RAGRTSVARWAVTT Mvan_0875|M.vanbaalenii_PYR-1 MTFDPVLPPAVLAVVAVALVGLRAVALRRAA-----GAGHRALLRWTTTT MSMEG_6607|M.smegmatis_MC2_155 MSLHPVLPPLVLAVLAAAVLAARITTWR---------TGGVTRWRWAGLT TH_4420|M.thermoresistible__bu MTFQPVLHVVVLPVIAAALVALRALTLRPAL-----AAGRAAVLRWCGVT MAB_0657|M.abscessus_ATCC_1997 MTFEPVLPWWMFIVLAVVIVALRMYTLYRVLVVVGGGSQRKVVLRWSLLT *::.**: :: * *..::. * : : ** * Mflv_0043|M.gilvum_PYR-GCK VALLLLVLAAARP----VTGSAAGEQNAQRPQAGANIYFLVDRSSDSAIP Mvan_0875|M.vanbaalenii_PYR-1 VAMLLLLVAAARP----GSGAAVEPGSGQPRQAGANVYFVVDRSEDSALT MSMEG_6607|M.smegmatis_MC2_155 TAAFLLLVAALRP----TFGDDGQESVRAAGDREPNVFVLVDRSPAMAR- TH_4420|M.thermoresistible__bu IAIALLLIAAARP----TLHVKDATSGETAGGADTNVFLIVDRSADSAVA MAB_0657|M.abscessus_ATCC_1997 LVIVSVFAAAARPGIEPTRHVLTESHAVAAANSNVNVFFVVDRSINSRAE . :. ** ** *::.:**** Mflv_0043|M.gilvum_PYR-GCK DFGD-APRITAMRSDIEEVIRAHPDARFAIIGFAARPSIDWPLSADTWSL Mvan_0875|M.vanbaalenii_PYR-1 DLDG-TQRMSKMRRDIDELITAHPGARFAVIAFASRPAIEWPLSEDTWSL MSMEG_6607|M.smegmatis_MC2_155 -------HMAAARDDITQLIDRHPDARFAVITFTSRPTVTWPLSADTWSL TH_4420|M.thermoresistible__bu DHGDGVDRMAGIRDDITALTERYPRARFALLSFAARPALEWPLSADVWSL MAB_0657|M.abscessus_ATCC_1997 DYGSGQFRMAGIRADMDAVVNQYPQGRFSITSFATGARVDWPLSEDIWSL ::: * *: : :* .**:: *:: . : **** * *** Mflv_0043|M.gilvum_PYR-GCK QPAVDALTPYPGID--SAEVNAAAAANILRYQLISAGQQFPQAENLVYYL Mvan_0875|M.vanbaalenii_PYR-1 APVVDALTPYAGLTAASANVNAGAAANVLRYQLIAAGQQYPHAPNLVYYL MSMEG_6607|M.smegmatis_MC2_155 RPVVAALGTDTGAD--AEQANVGAAGNVLRYQLISAQQQFPRAANLVYYL TH_4420|M.thermoresistible__bu QPVVDRLTPWRDQNGDPSRVNAAAAATVLRYQLIAAAQQYPESANLVFYF MAB_0657|M.abscessus_ATCC_1997 RALLKGYSAYVSELDSVYRVEVAAAADELRGQLELARRQYPGSSNVVFYL . : . . ..:..**. ** ** * :*:* : *:*:*: Mflv_0043|M.gilvum_PYR-GCK GSGAGESTVPQGVFDTPR-------IDDGAVLGYGTGP------------ Mvan_0875|M.vanbaalenii_PYR-1 GSGAPESSVPQGTFDTGP-------VDGGAVLGYGGG------------- MSMEG_6607|M.smegmatis_MC2_155 GAGAPGSQAPQREFDLPEGA-----VDGGAVLGFGGAG------------ TH_4420|M.thermoresistible__bu GSGAGASEAPQGEFDLIAGAAGRSLVDGGAVYGYGNPED----------- MAB_0657|M.abscessus_ATCC_1997 GEGAGASRQPAKSFDIPADL-----VDGGAVLGYGTTDGGAVASQLAANG * ** * * ** :*.*** *:* Mflv_0043|M.gilvum_PYR-GCK ------------------GEARLREIAAQLGLPYVPRRDGAELPSDRA-- Mvan_0875|M.vanbaalenii_PYR-1 --------------------AALRDIAGQLGLPYVQRGVGEALPRPDS-- MSMEG_6607|M.smegmatis_MC2_155 -------------------AQRLRAVADQIGVPYADD------LSDVP-- TH_4420|M.thermoresistible__bu ---------IRQTSGSPLNEAGLQRIAEQLGVPYLHRTAGRELPQPGP-- MAB_0657|M.abscessus_ATCC_1997 EKTYFQNAAGTGPFLSILDERSLKGIAEQLHVRYVHRVQGDSIAPVIPAL *: :* *: : * . Mflv_0043|M.gilvum_PYR-GCK -PESGTATATDPATAPQPTELYWVLTMLATALLLVEIYLTTRDLRRTRAV Mvan_0875|M.vanbaalenii_PYR-1 -AEA-SAEPGDPAATDGRVEYYWAFTMLAALLLLIEIFLTTRDLLRARAT MSMEG_6607|M.smegmatis_MC2_155 -ADAADSAAGTPAAGASRVEIYWLPAGIAAILVLAELYLVLRELRRN--T TH_4420|M.thermoresistible__bu -PTTGGASAS--GALTARIELYWVFAMVAAALLLAEIYFGLRDVRRTRPA MAB_0657|M.abscessus_ATCC_1997 DPSAATSEQRSISLPGSRTEFYWVFTGIAMVLMFYELFAMVREYRTSRIT . : : . * ** : :* *:: *:: *: . Mflv_0043|M.gilvum_PYR-GCK RRQAPS Mvan_0875|M.vanbaalenii_PYR-1 RREVPT MSMEG_6607|M.smegmatis_MC2_155 ETVVPA TH_4420|M.thermoresistible__bu RQAVQP MAB_0657|M.abscessus_ATCC_1997 RVRPT- .