For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3964 | - | - | 100% (133) | - |
M. thermoresistible (build 8) | TH_0868 | - | 2e-16 | 42.86% (112) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. thermoresistible (build 8) | TH_1326 | - | 1e-06 | 36.36% (66) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0484 | - | 1e-17 | 42.11% (114) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_0101 | - | 1e-16 | 43.75% (112) | XRE family transcriptional regulator |
M. tuberculosis H37Rv | Rv0474 | - | 1e-17 | 42.11% (114) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4084c | - | 5e-18 | 45.22% (115) | transcriptional regulator |
M. marinum M | MMAR_0799 | - | 9e-17 | 42.11% (114) | transcriptional regulatory protein |
M. avium 104 | MAV_4676 | - | 1e-17 | 42.98% (114) | transcriptional regulator, XRE family protein |
M. smegmatis MC2 155 | MSMEG_0918 | - | 3e-17 | 42.74% (117) | transcriptional regulator, XRE family protein |
M. ulcerans Agy99 | MUL_4542 | - | 8e-17 | 43.64% (110) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_0807 | - | 1e-16 | 43.64% (110) | XRE family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0101|M.gilvum_PYR-GCK MPPPPQDENLAAVVS----NAAQDIGSFIRSQREAAQVSVRQLAEKAGVS Mvan_0807|M.vanbaalenii_PYR-1 MP---QDENLAAVMS----SAAQDIGSFIRAQREAAQVSVRQLAEKAGVS MSMEG_0918|M.smegmatis_MC2_155 MA---QDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVS MAB_4084c|M.abscessus_ATCC_199 MP---QESDLATAVS----NAASDIGGFIRAQREAAQVSVRQLAEKAGVS Mb0484|M.bovis_AF2122/97 MS---SEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVS Rv0474|M.tuberculosis_H37Rv MS---SEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVS MMAR_0799|M.marinum_M MP---GEEKLGAKVS-AVSSKASDIGSFIRTQRENAHVSMRQLAERSGVS MUL_4542|M.ulcerans_Agy99 MP---GEEKLGAKVS-AVSSKASDIGSFIRTQRENAHVSMRQLAERSGVS MAV_4676|M.avium_104 MA---PEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVS TH_3964|M.thermoresistible__bu MGSMSDEKWFPGKAT---------IGSYIRAQRELSKMSLRELARMSQVS * :. : : **.:**:*** :::*:*:**. : ** Mflv_0101|M.gilvum_PYR-GCK NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYIQAG-ILEPGD----- Mvan_0807|M.vanbaalenii_PYR-1 NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAG-ILEPSE----- MSMEG_0918|M.smegmatis_MC2_155 NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAG-ILEPSE----- MAB_4084c|M.abscessus_ATCC_199 NPYLSQIERGLRRPSAEVLNQIAKALRVSAEVLYVRAG-ILDRSD----- Mb0484|M.bovis_AF2122/97 NPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVRAG-ILEPSE----- Rv0474|M.tuberculosis_H37Rv NPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVRAG-ILEPSE----- MMAR_0799|M.marinum_M NPYLSQVERGLRKPSADVLAQIAKALRVSAEVLYVRAG-ILEPSE----- MUL_4542|M.ulcerans_Agy99 NPYLSQVERGLRKPSADVLAQIAKALRVSAEVLYVRAG-ILEPSE----- MAV_4676|M.avium_104 NPYLSQVERGLRKPSADVLNQIAKALRVSAEVLYVRAG-ILEPSD----- TH_3964|M.thermoresistible__bu NAYLSQIERGLHEPSLRVLAAIAEALSLPLEELMAQARPDSRPTDGTTRR *.****:****:.** ** **:** :. * * :* : Mflv_0101|M.gilvum_PYR-GCK TNEVRDAIITDMAINERQKQVLLDIYTSFCQQNEAALAEAAAADEMAKAS Mvan_0807|M.vanbaalenii_PYR-1 TNEVRDAIVTDTAINERQKQVLLDIYTSFCQQNEAVLAEAVSATEAR--- MSMEG_0918|M.smegmatis_MC2_155 PSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPEGAA------- MAB_4084c|M.abscessus_ATCC_199 ASPVRDAIIADTFITERQKQVLLDVYSSFVQQNAEAQSDVAES------- Mb0484|M.bovis_AF2122/97 TSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSD------- Rv0474|M.tuberculosis_H37Rv TSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSD------- MMAR_0799|M.marinum_M TSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSS-------- MUL_4542|M.ulcerans_Agy99 TSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVCEEYSS-------- MAV_4676|M.avium_104 KSQVRDAIVTDTAITERQKQILLDIYASFTQQNEATHEECPTQ------- TH_3964|M.thermoresistible__bu TDAVEAAIRAESRLTQAQKEALLAVYRSYLAESEGSQQPGD--------- . *. .* : :.: **: ** :* *: :. Mflv_0101|M.gilvum_PYR-GCK ADSVSDADEEPTTEQGTSALEISRTPQSIAELNLQKEGLHHG Mvan_0807|M.vanbaalenii_PYR-1 GDNVTDVDEEPTTEQDKSPLEIPEVPQSITELKPPKEGHSHG MSMEG_0918|M.smegmatis_MC2_155 --VIPSPDEEPATD---------------------------- MAB_4084c|M.abscessus_ATCC_199 -----DLELPATTE---------------------------- Mb0484|M.bovis_AF2122/97 ---------PTPTDD--------------------------- Rv0474|M.tuberculosis_H37Rv ---------PTPTDD--------------------------- MMAR_0799|M.marinum_M ---------PSEIDD--------------------------- MUL_4542|M.ulcerans_Agy99 ---------PSEIDD--------------------------- MAV_4676|M.avium_104 ---------PDSE----------------------------- TH_3964|M.thermoresistible__bu ------------------------------------------