For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_4676 (-)

annotation: transcriptional regulator, XRE family protein
coordinates: 4805033 - 4805449
length: 138

APEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRKPSADVLNQIAK
ALRVSAEVLYVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASFTQQNEATHEECPTQPDSE*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_4676--100% (138)transcriptional regulator, XRE family protein
M. avium 104MAV_3636-2e-0637.50% (64) DNA-binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0484-3e-6085.93% (135) transcriptional regulatory protein
M. gilvum PYR-GCKMflv_0101-2e-4978.74% (127) XRE family transcriptional regulator
M. tuberculosis H37RvRv0474-3e-6085.93% (135) transcriptional regulatory protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4084c-3e-4677.69% (121) transcriptional regulator
M. marinum MMMAR_0799-2e-5486.72% (128) transcriptional regulatory protein
M. smegmatis MC2 155MSMEG_0918-2e-5079.84% (129) transcriptional regulator, XRE family protein
M. thermoresistible (build 8)TH_0868-2e-4880.00% (120) PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN
M. ulcerans Agy99MUL_4542-3e-5386.61% (127) transcriptional regulatory protein
M. vanbaalenii PYR-1Mvan_0807-2e-4979.53% (127) XRE family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0101|M.gilvum_PYR-GCK          MPPPPQDENLAAVVS----NAAQDIGSFIRSQREAAQVSVRQLAEKAGVS
Mvan_0807|M.vanbaalenii_PYR-1       MP---QDENLAAVMS----SAAQDIGSFIRAQREAAQVSVRQLAEKAGVS
MSMEG_0918|M.smegmatis_MC2_155      MA---QDENLAAVVS----NAAQDIGSFIRAQREAAQVSVRQLAEKAGVS
MAB_4084c|M.abscessus_ATCC_199      MP---QESDLATAVS----NAASDIGGFIRAQREAAQVSVRQLAEKAGVS
TH_0868|M.thermoresistible__bu      -------------VS----NAAQDIGSFIRSQREAAQVSLRQLAEKAGVS
Mb0484|M.bovis_AF2122/97            MS---SEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVS
Rv0474|M.tuberculosis_H37Rv         MS---SEEKLAAKVSTKASDVASDIGSFIRSQRETAHVSMRQLAERSGVS
MMAR_0799|M.marinum_M               MP---GEEKLGAKVS-AVSSKASDIGSFIRTQRENAHVSMRQLAERSGVS
MUL_4542|M.ulcerans_Agy99           MP---GEEKLGAKVS-AVSSKASDIGSFIRTQRENAHVSMRQLAERSGVS
MAV_4676|M.avium_104                MA---PEEKLSAKVSNAASDMASDIGSFIRSQRELAQVSVRQLAEKSGVS
                                                 :*    . *.***.***:*** *:**:*****::***

Mflv_0101|M.gilvum_PYR-GCK          NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYIQAGILEPGDTNEVRD
Mvan_0807|M.vanbaalenii_PYR-1       NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAGILEPSETNEVRD
MSMEG_0918|M.smegmatis_MC2_155      NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAGILEPSEPSEVRD
MAB_4084c|M.abscessus_ATCC_199      NPYLSQIERGLRRPSAEVLNQIAKALRVSAEVLYVRAGILDRSDASPVRD
TH_0868|M.thermoresistible__bu      NPYLSQIERGLRKPSADVLNQIAKALRVSAEVLYVRAGILEPGEPSEVRD
Mb0484|M.bovis_AF2122/97            NPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRD
Rv0474|M.tuberculosis_H37Rv         NPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVRAGILEPSETSQVRD
MMAR_0799|M.marinum_M               NPYLSQVERGLRKPSADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRD
MUL_4542|M.ulcerans_Agy99           NPYLSQVERGLRKPSADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRD
MAV_4676|M.avium_104                NPYLSQVERGLRKPSADVLNQIAKALRVSAEVLYVRAGILEPSDKSQVRD
                                    ******:*****:***:** **************::****: .: . ***

Mflv_0101|M.gilvum_PYR-GCK          AIITDMAINERQKQVLLDIYTSFCQQNEAALAEAAAADEMAKASADSVSD
Mvan_0807|M.vanbaalenii_PYR-1       AIVTDTAINERQKQVLLDIYTSFCQQNEAVLAEAVSATEAR---GDNVTD
MSMEG_0918|M.smegmatis_MC2_155      AIVNDVSITERQKQVLLDIYTSFRQQNEAAGEPEGAA---------VIPS
MAB_4084c|M.abscessus_ATCC_199      AIIADTFITERQKQVLLDVYSSFVQQNAEAQSDVAES------------D
TH_0868|M.thermoresistible__bu      AIVNDTAITERQKQVLLDIYTSFCRQNEQD-ADAD---------------
Mb0484|M.bovis_AF2122/97            AIITDTAITERQKQILLDIYASFTHQNEATREECPSD-------------
Rv0474|M.tuberculosis_H37Rv         AIITDTAITERQKQILLDIYASFTHQNEATREECPSD-------------
MMAR_0799|M.marinum_M               VIITDTAITERQKQILLDIYASFTQQNEAVREECSS--------------
MUL_4542|M.ulcerans_Agy99           VIITDTAITERQKQILLDIYASFTQQNEAVCEEYSS--------------
MAV_4676|M.avium_104                AIVTDTAITERQKQILLDIYASFTQQNEATHEECPTQ-------------
                                    .*: *  *.*****:***:*:** :**                       

Mflv_0101|M.gilvum_PYR-GCK          ADEEPTTEQGTSALEISRTPQSIAELNLQKEGLHHG
Mvan_0807|M.vanbaalenii_PYR-1       VDEEPTTEQDKSPLEIPEVPQSITELKPPKEGHSHG
MSMEG_0918|M.smegmatis_MC2_155      PDEEPATD----------------------------
MAB_4084c|M.abscessus_ATCC_199      LELPATTE----------------------------
TH_0868|M.thermoresistible__bu      -EEQPTASRD--------------------------
Mb0484|M.bovis_AF2122/97            ----PTPTDD--------------------------
Rv0474|M.tuberculosis_H37Rv         ----PTPTDD--------------------------
MMAR_0799|M.marinum_M               ----PSEIDD--------------------------
MUL_4542|M.ulcerans_Agy99           ----PSEIDD--------------------------
MAV_4676|M.avium_104                ----PDSE----------------------------
                                        .