For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3646 | - | - | 100% (731) | phage integrase family protein |
| M. thermoresistible (build 8) | TH_3747 | - | 2e-07 | 25.70% (179) | PUTATIVE phage integrase family protein |
| M. thermoresistible (build 8) | TH_2462 | - | 6e-06 | 30.97% (113) | PUTATIVE phage integrase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4644 | - | 1e-14 | 28.48% (330) | phage integrase family protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0443 | - | 0.0 | 65.79% (722) | putative transposase/integrase |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_0504 | - | 0.0 | 64.20% (662) | putative transposase |
| M. smegmatis MC2 155 | MSMEG_4156 | - | 1e-25 | 24.20% (624) | putative transposase |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5419 | - | 0.0 | 82.92% (726) | phage integrase family protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3646|M.thermoresistible__bu --------------VAGLGSWEAQWAQVPAAWRRPVYPIYAAPYDEVFLR
Mvan_5419|M.vanbaalenii_PYR-1 --MDPPPPRGAASSPVAVSSWQSQWARVPGQWRKPVYPIDTAPFQEVFLR
MAV_0504|M.avium_104 --------------------------------------------------
MAB_0443|M.abscessus_ATCC_1997 MTPTNPPEDLTPKSAGPDTSWAHQWAQVPPRWRTPIYRIDTAPASEVFTL
MSMEG_4156|M.smegmatis_MC2_155 --------MTALDPNSTLGLLGRLMAGVRSEFRRDVLEFAAD--------
Mflv_4644|M.gilvum_PYR-GCK -----------MLPEHDYAPTPETPAQIYAAYLVHLQ-------------
TH_3646|M.thermoresistible__bu NQFYLRANRATAAHDFTPAAPSRFAEEIAWWVWLCWDQQLRRIEPSLLAW
Mvan_5419|M.vanbaalenii_PYR-1 NQFYLRGNRAGAAHDFTPAAPPRFAEEIAWWVWWCWDQQLRKIEPSLLAW
MAV_0504|M.avium_104 -------------------------------MWLCHHEGLRRIEPSVLKW
MAB_0443|M.abscessus_ATCC_1997 NN-YYRTRSNGQGYDFTPAGPPRFADELAWWVYICWREGLCRIDPGDLKW
MSMEG_4156|M.smegmatis_MC2_155 DAVFGGGSCRVTDCGRSARGHGLCQGHHQRWANAGRPDLEEFTVSTDPRW
Mflv_4644|M.gilvum_PYR-GCK -----RRDRGNTAYAQAARSFLRRWPRVQSWADIPLDEQLAANCSTRP--
: .
TH_3646|M.thermoresistible__bu LVRTLPGAVAEHSARTGHPPVSIADLDPTELIRQAALAFQRRN-----NR
Mvan_5419|M.vanbaalenii_PYR-1 LVRTLPAAISEHTTRTGAAPTSIAELDPTELIRQAALSFQRRN-----NR
MAV_0504|M.avium_104 AGQALTAAAADYRNTHGHQPTSITDLSAATIVRHAMLVFEKRN-----AR
MAB_0443|M.abscessus_ATCC_1997 FLRALPAVIEDYQRRHGRPPHSLLDLTASEIMRHAVVSFERRN-----GR
MSMEG_4156|M.smegmatis_MC2_155 RKHRPNQACRVDGCGYGSARGGLCQLHAQRWERAGRPHLASWLRDPLPVK
Mflv_4644|M.gilvum_PYR-GCK FVTFLMVSRRLQPGYDYLVHRKLSSLWHELTDSCLQPDLDQFIS-----A
: .* :
TH_3646|M.thermoresistible__bu LPSAGSRRNIRHLIEHLHLAVAVRCTDAPWWSHDIWDLRADPRIPQRPHE
Mvan_5419|M.vanbaalenii_PYR-1 LPSPGSRRNISHLIEHLHLNVSVSCTDTPWWAHDIWDLRADPRIPQRPHE
MAV_0504|M.avium_104 LPSPGARRNVTHLIEHLHLYLSVRTTDTDWWAHDTWDLRADPRIPQREHE
MAB_0443|M.abscessus_ATCC_1997 LPTAGYRRNLGYTIDKLFVLLAVRCSEAPWWSRDLWDLRIDPRIPQREHE
MSMEG_4156|M.smegmatis_MC2_155 QPRPGATCRIRHCSLWPQAESPLCHSHTNTWKANGRTDIDGFVTRFESND
Mflv_4644|M.gilvum_PYR-GCK ALELGFTERVASAIGSQIIARLLIQTGRPLTGLRESDLQELLHACHVRQE
* .: : : ::
TH_3646|M.thermoresistible__bu PHHDQAVRLRGIEPVWLREGLRFWLRSALTYDLLTWSSVVSRAR-----N
Mvan_5419|M.vanbaalenii_PYR-1 PCHDQTVRLRGITPDWLREGLRFWLRSALTYDLLTWSSVVDRAR-----N
MAV_0504|M.avium_104 PGHDQSVKIGAITPDWLREGVRFWLRTALDAELLRWSSAVERAR-----D
MAB_0443|M.abscessus_ATCC_1997 PRHEQALKLAGIEPDWLREGVRFWMRTALTHQLFTWTTVISRSG-----N
MSMEG_4156|M.smegmatis_MC2_155 TPANETIQLGMLTPQLKLEMQYVLQQRHDDRRGKLTPTVVARVVRLLIDT
Mflv_4644|M.gilvum_PYR-GCK RTGRGAKHYRSTTHSARQILFHLGILDTQARPAVTALTLEQRMVD----V
: : . : *
TH_3646|M.thermoresistible__bu IGSQLGRFARDRGYLHDPLISTDPDELREAFLGYLEYLRSPQAATQSER-
Mvan_5419|M.vanbaalenii_PYR-1 LGSQLGHFATTAGHLQDPLISTDPDQLRTVFLDYLDYLRSPQAATHSER-
MAV_0504|M.avium_104 MARHFGAFATEHG-YADPALADDPAQLRLIFTAFTEYLRSPAAAATPDKP
MAB_0443|M.abscessus_ATCC_1997 LGRQLGTFCVARGHLHDPLISTDPDTLRDVFLDFLDHLRSPQASANKRG-
MSMEG_4156|M.smegmatis_MC2_155 ATTSLLDFDADEWRQRSAVLLNDTRSRGLLLYAHSTVLDLAEAGG-WEAE
Mflv_4644|M.gilvum_PYR-GCK PVALRPAFVAYLNRKYATCVPKTVSSLATRLAHFGRYLAAADPSLTSLN-
* . : : . * . ..
TH_3646|M.thermoresistible__bu LTPYTVASLQSETQSFYTFMHDHAAEAAAGTGNLRWREATLTH-----TA
Mvan_5419|M.vanbaalenii_PYR-1 LTSDTVASLQAQTQSFYTFMHDHAAEAATATATARWRDITLTH-----TA
MAV_0504|M.avium_104 LTPSAIDATQSYTQVFYTFMVDHAPEAAAATGNPRWLALTDAH-----TR
MAB_0443|M.abscessus_ATCC_1997 LTDYMVAEIQYEVQSFYTFMYDHAAEAAAATSNMRWKDITVGH-----TR
MSMEG_4156|M.smegmatis_MC2_155 YPRDVWRMHRLGYEGHYTLRFDRIPQPWLREPAKRWIRLRLSRGLNLEAG
Mflv_4644|M.gilvum_PYR-GCK -QLDRRRHIEPFITSLTTATNSVTGEPITVADRIRCIHAVGNF-------
. * . :. *
TH_3646|M.thermoresistible__bu LWSPIHAPRRQ------RSERDLTWYSTADLQRMLTYLDVLAADRKQKVV
Mvan_5419|M.vanbaalenii_PYR-1 LWSPINAPKHR------RRARELTWHSTADLQRMLAYLDVLAAEPKQKVV
MAV_0504|M.avium_104 LWGPAFRARRA------NRVRELSWYSTGELQQMLAYLDVLAADRGTLVA
MAB_0443|M.abscessus_ATCC_1997 LWAPAYQPRRA------KKYRELTWYSTADLQRMLTYLDVLAARTSQRII
MSMEG_4156|M.smegmatis_MC2_155 GGRPLLAIARFGRFLAEVDIEDISRIDRELLERYLAHLNREYSPQRRGAH
Mflv_4644|M.gilvum_PYR-GCK ------------------LAEITEWGWDDAPPRRLIFRTDLPRPPRCLPR
. : * .
TH_3646|M.thermoresistible__bu MTRPDGTLTVLPG---LGDPQAARIWLLQALTGRRASEILMLDYDPLEAI
Mvan_5419|M.vanbaalenii_PYR-1 LTGPDGDLSVLAG---LGDPQAARIWLLQALTGRRASEILMLDYDPLEAI
MAV_0504|M.avium_104 LTHPDGTASIIKG---LGDPQAARIWLLQALTGRRASEILMLDHQPLQPI
MAB_0443|M.abscessus_ATCC_1997 LNQPDGTITVAPG---LGDPQAARIWLLQAMTGRRASEILMLDHDPLSAI
MSMEG_4156|M.smegmatis_MC2_155 IGLLNGFFAAIRQHCWATGLPATAMFFAEDHPKRGEHLPRALAEHVMTQL
Mflv_4644|M.gilvum_PYR-GCK YLPVDSDRKLTAALAKSPYRLAADALLVQRACGLRIGELLDLELDCIHEI
:. *: : : * . : :
TH_3646|M.thermoresistible__bu PGRD----------------------------RPTDAAEPDSGAFVARLR
Mvan_5419|M.vanbaalenii_PYR-1 PGQD----------------------------RPVG-TEPDNGAFVARLR
MAV_0504|M.avium_104 PGAE----------------------------RPTDSDDPD--AFVAKLR
MAB_0443|M.abscessus_ATCC_1997 PGVD----------------------------RPPD---SDNETFVARLR
MSMEG_4156|M.smegmatis_MC2_155 EHRDNLDRFNNPVYRLITVILMRCGLRITDALRLRGDCVTTDANGAPYLR
Mflv_4644|M.gilvum_PYR-GCK PGQG------------------------------------------SWLK
. *:
TH_3646|M.thermoresistible__bu YQQTKVDGVIPTILVEQAIVDIITEQQAWLKSKYPALQPKYLFLGIKNQH
Mvan_5419|M.vanbaalenii_PYR-1 YQQTKVDGIVPTILVEQAIVDIIGEQQRWLTTKYPQLQSKYLFLGLKNQH
MAV_0504|M.avium_104 YQQTKVDDVTPTILVEQAVVNVVTEQQRWLTTTYPGLTPKYLFIGVKQNL
MAB_0443|M.abscessus_ATCC_1997 YQQTKVEGVDPTILVEQPVVDIITEQQRWLAEHHPDIRPKYLFVGMLHQH
MSMEG_4156|M.smegmatis_MC2_155 YFNHKMK-RDALVPIAPDLVDMIGYQRRLVSERWPDG-TALLFPRPTKNI
Mflv_4644|M.gilvum_PYR-GCK VPLGKLN-SERMIPVDDEVLTLVDRITTTRSSGRPMIHPRTGAPADFLFT
*:. : : :: :: * .
TH_3646|M.thermoresistible__bu RGQRPRSYTTYRAMLDKLDQCHDLTDSAGRPLRFTQTHRLRHTRATELLN
Mvan_5419|M.vanbaalenii_PYR-1 RGQRPRSYTTYRAMLDKLDKCHTLTDSAGRALRFTQTHRLRHTRATELLN
MAV_0504|M.avium_104 AGRRPRPYASYNLSLAKLDNIHGLTDAAGNPLRFTQTHRLRHTRATELLN
MAB_0443|M.abscessus_ATCC_1997 QGQRPRAYSSYLNALRRLDAIHALTDSAGHKLRFTQTHRLRHTRATELLN
MSMEG_4156|M.smegmatis_MC2_155 DGQIPLAIPTYREALHRWLAVCDIRDEHSDPVHLTP-HQWRHTLGTRLIN
Mflv_4644|M.gilvum_PYR-GCK HHGKRLSQNAVREELNRAAQAASLGHITP--------HQLRHTYATALIN
. : * : : . *: *** .* *:*
TH_3646|M.thermoresistible__bu DGVPFHVVQRYLGHKSPEMTARYAATLAATAEAEFLKHKKIGAHGADIDI
Mvan_5419|M.vanbaalenii_PYR-1 DGVPFHVVQRYLGHKSPEMTARYAATLAATAEAEFLKHKKIGAHGADIDI
MAV_0504|M.avium_104 DGVPIHVVQRYLGHKSPEMTMRYASTLAATAEAEFLKHKKIGAHGVEIAI
MAB_0443|M.abscessus_ATCC_1997 DGVPFHVVQRYMGHKSPEMTARYAATLAATAEAEFLKHKKIGAHGADIAI
MSMEG_4156|M.smegmatis_MC2_155 RDVPQEVVRRILDHDSPQMTAHYARLHDTTVRRAWEAARKVDSHGREVNL
Mflv_4644|M.gilvum_PYR-GCK AGVSLQALMALLGHVSTQMSLRYAHLFDHTVRTEYERALDLAKSHIGALP
.*. ..: :.* *.:*: :** *.. : .:
TH_3646|M.thermoresistible__bu TPHD---IYEMTQLAKR----TDRVLPNGVCLLPPLK-SCDKGNACLSCG
Mvan_5419|M.vanbaalenii_PYR-1 TPHD---IYEMTQLAAR----TDRVLPNGVCLLPPLK-QCDKGNACLGCG
MAV_0504|M.avium_104 SPSD---ILDMTQLSAR----TDRVLPNGVCLLPPLK-TCDKGNACLSCG
MAB_0443|M.abscessus_ATCC_1997 SPND---IYDMTQLGKR----TDRILPNGVCLLPPLK-SCDKGNACLSCG
MSMEG_4156|M.smegmatis_MC2_155 DPDG---PLAEAAWAKQRLGRATQALPNGYCGLPVQQ-SCPHANACLTCP
Mflv_4644|M.gilvum_PYR-GCK KTAVGLPITDITGTGWKDTPAIKSRLAGGYCLRAPAQGSCPYANICEHCP
. : . : *..* * . : * .* * *
TH_3646|M.thermoresistible__bu HFATDATHLAELRQQLASTQTLIAQRQDQYRQRSGRELGEDNIWIIERRR
Mvan_5419|M.vanbaalenii_PYR-1 HFATDTTHLDELRAQLAATEALIATRRDQYRQRAGRELGDDNIWIIERHR
MAV_0504|M.avium_104 HFATDITHAAELRDQHTKTAALIELRRQQYRQRTGRELTDDNVWIRERLR
MAB_0443|M.abscessus_ATCC_1997 HFATDRTHLEELVAQRAATHTLLEQRRAQVLARTGRELTDENVWVAERLR
MSMEG_4156|M.smegmatis_MC2_155 MFLTTQEFLPQHRTQREQTLHLITAAEARGHQR----------LAEMNRQ
Mflv_4644|M.gilvum_PYR-GCK SFHTDSTHLAVLAAQRIDAQDLAADAEKRGWID----------EAERHHN
* * . * : * . : . .
TH_3646|M.thermoresistible__bu EIASLQAIIDRLTTEEAG---SVAGAGAAKRLPLLQIQTRGAHQSALDKA
Mvan_5419|M.vanbaalenii_PYR-1 EIDSLHAIIDRLAATADN---SVAGPGTGKRLPLLQIQTRGAHQSALDKA
MAV_0504|M.avium_104 ELNSLQAILERLAADAGTPESAISGAGTFRRLPLHVIATRGAHDSALRKA
MAB_0443|M.abscessus_ATCC_1997 EITSLNAIIGRLSSKELGEAQAVGGPATAERIPLLPIVTRGSHQSALDKA
MSMEG_4156|M.smegmatis_MC2_155 VLGNLDAIITSLDT---------------------PTDPKAAEHAS----
Mflv_4644|M.gilvum_PYR-GCK LVSRLDALITGSASA-----------------------------------
: *.*:: :
TH_3646|M.thermoresistible__bu RRRRTGEP
Mvan_5419|M.vanbaalenii_PYR-1 SRPRTGEQ
MAV_0504|M.avium_104 DPRADA--
MAB_0443|M.abscessus_ATCC_1997 RRPDHPTG
MSMEG_4156|M.smegmatis_MC2_155 --------
Mflv_4644|M.gilvum_PYR-GCK --------