For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3423 | - | - | 100% (117) | - |
M. thermoresistible (build 8) | TH_2906 | - | 1e-13 | 30.93% (97) | PUTATIVE transcriptional regulator, ArsR family |
M. thermoresistible (build 8) | TH_1045 | - | 9e-08 | 36.36% (77) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2673c | - | 5e-08 | 43.48% (69) | ArsR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_3234 | - | 3e-11 | 28.87% (97) | regulatory protein, ArsR |
M. tuberculosis H37Rv | Rv2640c | - | 5e-08 | 43.48% (69) | ArsR family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2014c | - | 5e-14 | 35.11% (94) | putative transcriptional regulator, ArsR |
M. marinum M | MMAR_2816 | - | 8e-10 | 33.33% (96) | ArsR-type repressor |
M. avium 104 | MAV_2783 | - | 3e-11 | 36.36% (99) | ArsR family protein transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_6762 | - | 1e-09 | 32.35% (102) | transcriptional regulator |
M. ulcerans Agy99 | MUL_2937 | - | 1e-10 | 34.00% (100) | ArsR-type repressor |
M. vanbaalenii PYR-1 | Mvan_5891 | - | 1e-13 | 34.62% (104) | regulatory protein, ArsR |
CLUSTAL 2.0.9 multiple sequence alignment TH_3423|M.thermoresistible__bu -----------------------MTATDQLH----PVFHALGDPNRMRLI MMAR_2816|M.marinum_M -----------------------MCTPERIC---DRIFVALASPVRRKLL MUL_2937|M.ulcerans_Agy99 -----------------------MCTPERIC---DRIFVALASPVRRKLL MAV_2783|M.avium_104 -----------------------MVVVTGV----DRVFLALANPVRRELL Mflv_3234|M.gilvum_PYR-GCK ---------MAAGTRGTTYSLTGICQASRFGGMQSSVFAALGEPSRLRMV Mvan_5891|M.vanbaalenii_PYR-1 --------------------MPNQSGSDGIG----RVFQALADPTRRAIV Mb2673c|M.bovis_AF2122/97 MPKSLPVIDISAPVCCAPVAAGPMSDGDALA--VALRLKALADPARVKIM Rv2640c|M.tuberculosis_H37Rv MPKSLPVIDISAPVCCAPVAAGPMSDGDALA--VALRLKALADPARVKIM MSMEG_6762|M.smegmatis_MC2_155 -------------------MWVTVIDEDRAD----ALFHALADRTRRDIM MAB_2014c|M.abscessus_ATCC_199 -----------------------MTAVIDDD-----LWAAVGDPTRLRVF *:.. * :. TH_3423|M.thermoresistible__bu TRLCDAG--PGSTSQVAQAVSVSRQAATKHLLILEEAGLVRSDRRGRERI MMAR_2816|M.marinum_M EILTGQ---PLSAGELSDRFELSRPAIAEHLKVLREAGLVSDEAQGRRRI MUL_2937|M.ulcerans_Agy99 EILTGR---PLSAGELSDRFELSRPAIAEHLKVLREAGLVSDEAQGRRRI MAV_2783|M.avium_104 QLLARH---PLSAGELSERFELSRPAVAEHLKVLREAALVADERRGRQRI Mflv_3234|M.gilvum_PYR-GCK ELLRTG---PLSVGEIAEKLEIRQPQVSKHLRILGDSGIVSVEALARKRI Mvan_5891|M.vanbaalenii_PYR-1 ERLVRR---PATVKALAEPLTMSLPAVMQHLQVLEAAGVIVTEKVGRVRS Mb2673c|M.bovis_AF2122/97 SYLFSSPAGEQVSGQLAAALSLSDGTVSHHLAQLRKAGLVISDRRGMHVF Rv2640c|M.tuberculosis_H37Rv SYLFSSPAGEQVSGQLAAALSLSDGTVSHHLAQLRKAGLVISDRRGMHVF MSMEG_6762|M.smegmatis_MC2_155 RRVLAG---EQSVSALASKYDVSFAAVQKHVAVLEKAGLLTKRRRGREQL MAB_2014c|M.abscessus_ATCC_199 DLILTHG--MATATTLSDRLPVTRQAVTKHLSVLDKAGLVHATTHGREKQ : :: : .*: * :.:: . TH_3423|M.thermoresistible__bu WRMQPEALDDASEYLDRLARRWDRALGRLRAFVEAPEQPDPGMSE MMAR_2816|M.marinum_M YRLTAEPLAELGEWLHPFEKLWRDKLSALAETAEEQQ-------- MUL_2937|M.ulcerans_Agy99 YRLTAEPLAELGEWLHPFEKLWREKLSALAEAAEEQQ-------- MAV_2783|M.avium_104 YHLTAEPLAELGEWLHPFEKFWRTRLRRLAEVAEELE-------- Mflv_3234|M.gilvum_PYR-GCK YHLIPEPFEQIAQWTESFETLWEVRMDSLGTFLDSITDDND---- Mvan_5891|M.vanbaalenii_PYR-1 CRIQPEALREAEQWLGRQRTDWERQLDQLDDYLKGN--------- Mb2673c|M.bovis_AF2122/97 HRVHPEALQALCTVLNPNCCA------------------------ Rv2640c|M.tuberculosis_H37Rv HRVHPEALQALCTVLNPNCCA------------------------ MSMEG_6762|M.smegmatis_MC2_155 ASGDVATVRSVSQMLAELEQIWRGRIARIDQLISSEPLKED---- MAB_2014c|M.abscessus_ATCC_199 YRADAEQVARIAEQLTAVGAAWDRRLARIKLIAESLSSAQKAED- .