For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3343 | - | - | 100% (89) | PE domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3902 | PE35 | 1e-18 | 52.33% (86) | PE family-like protein |
M. gilvum PYR-GCK | Mflv_0769 | - | 4e-25 | 60.47% (86) | PE-like protein |
M. tuberculosis H37Rv | Rv3872 | PE35 | 1e-18 | 52.33% (86) | PE family-related protein |
M. leprae Br4923 | MLBr_02534 | - | 1e-06 | 40.85% (71) | PE-family protein |
M. abscessus ATCC 19977 | MAB_0664 | - | 5e-07 | 36.62% (71) | PE family protein |
M. marinum M | MMAR_0185 | - | 6e-23 | 60.47% (86) | PE family protein, PE35 |
M. avium 104 | MAV_4868 | - | 3e-08 | 42.25% (71) | PE family protein |
M. smegmatis MC2 155 | MSMEG_0063 | - | 2e-29 | 75.29% (85) | PE family protein |
M. ulcerans Agy99 | MUL_4359 | - | 8e-16 | 50.59% (85) | PE family protein |
M. vanbaalenii PYR-1 | Mvan_0076 | - | 2e-27 | 63.22% (87) | PE-like protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3902|M.bovis_AF2122/97 MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQA Rv3872|M.tuberculosis_H37Rv MEKMSHDPIAADIGTQVSDNALHGVTAGSTALTSVTGLVPAGADEVSAQA MUL_4359|M.ulcerans_Agy99 MQSMSIDPVAADIGAQLAEGAFRGLQAGATAATSITSVRPAGADEVSTQA MMAR_0185|M.marinum_M MRSMSFDPAAASVAAAISAHASRGLDAGTAAASSVTGLAPAGADEISAQF TH_3343|M.thermoresistible__bu ----------VGIGSQVIANGTRGLAVGTAASAEVTALVPAGADEVSAQA MSMEG_0063|M.smegmatis_MC2_155 MQPMTHNPGAEAVAAQVIANAARGLAGGTTASAAVTALVPAGADEVSALA Mflv_0769|M.gilvum_PYR-GCK MQPLNHNPAAAGIGGQVTANGARGLGVGTAATAEVSALAPAGVDEISAVA Mvan_0076|M.vanbaalenii_PYR-1 MQPLSHNPGAIGVGGQVTANGARGLATGTAATSAVSALAPAGADEVSAAA MLBr_02534|M.leprae_Br4923 MTLRVVPEKLAATSEAMKALTARLEAAHAAAFPCLVAVVPPAADPVSLQT MAV_4868|M.avium_104 MTLRVVPEGLAATSAAVEALTARLAAAHAAAAPAITAVVPPAADPVSLQT MAB_0664|M.abscessus_ATCC_1997 MSLNVVPEGLTAASAAVEALTARLAAVNAAAAPVIGAVMPPAADPVSMQS . : : ::* . : .: *...* :* Mb3902|M.bovis_AF2122/97 ATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAG----- Rv3872|M.tuberculosis_H37Rv ATAFTSEGIQLLASNASAQDQLHRAGEAVQDVARTYSQIDDGAAG----- MUL_4359|M.ulcerans_Agy99 MLAFTKHAGQMLALNQAAQEELRRAGEAVNAIARMYADTDVAVARNLIDV MMAR_0185|M.marinum_M AAAFAAEGAQVLALNTAAQDELARAGQALRQIAGMYSAVDNSWSD----- TH_3343|M.thermoresistible__bu AAAFAKEGMEALALNTFAQEELARAGAAVVQIAGIYDAVDAANAG----- MSMEG_0063|M.smegmatis_MC2_155 AVAFASEGVEALAANAFAQEELTRAGAAFAEIAGIYNAVDAANAA----- Mflv_0769|M.gilvum_PYR-GCK ALSFASEGIQTLGINAMAQQEIARAGATVIEASVAYEATDAANGA----- Mvan_0076|M.vanbaalenii_PYR-1 AVTFAAEGIQTLGINALAQEEIARAGASIIEAAGAYQAVDASNAT----- MLBr_02534|M.leprae_Br4923 AAGFSARGQEHALVAAQGVEELGRAGIGVGQSSTHYAISDALAAS----- MAV_4868|M.avium_104 ALGFSAQGQEHSAVAAQGVEELGRAGVGVGEAGASYLAGDTAAAA----- MAB_0664|M.abscessus_ATCC_1997 AALFSAHGLERTGAGARAAYELGRSGVGATEAAASYTVGDIQAAA----- *: .. : . :: *:* . * * . Mb3902|M.bovis_AF2122/97 ------VFA---- Rv3872|M.tuberculosis_H37Rv ------VFAE--- MUL_4359|M.ulcerans_Agy99 GWRSGSALANV-- MMAR_0185|M.marinum_M ------TLA---- TH_3343|M.thermoresistible__bu ------TLA---- MSMEG_0063|M.smegmatis_MC2_155 ------TM----- Mflv_0769|M.gilvum_PYR-GCK ------KLI---- Mvan_0076|M.vanbaalenii_PYR-1 ------TLI---- MLBr_02534|M.leprae_Br4923 ------TYGIVES MAV_4868|M.avium_104 ------TFGIAGA MAB_0664|M.abscessus_ATCC_1997 ------TYLPGIA