For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3318 | - | - | 100% (128) | - |
| M. thermoresistible (build 8) | TH_0639 | - | 5e-08 | 29.82% (114) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4472 | - | 2e-07 | 30.84% (107) | hypothetical protein Mflv_4472 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1488 | - | 2e-07 | 28.33% (120) | hypothetical protein MMAR_1488 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_2066 | - | 3e-13 | 37.50% (112) | hypothetical protein MSMEG_2066 |
| M. ulcerans Agy99 | MUL_2451 | - | 9e-07 | 27.50% (120) | hypothetical protein MUL_2451 |
| M. vanbaalenii PYR-1 | Mvan_1887 | - | 1e-10 | 32.41% (108) | hypothetical protein Mvan_1887 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4472|M.gilvum_PYR-GCK -------MPD---TAV-----VADRLFAAITRSDIDTVAQMFSPGVAVWH
Mvan_1887|M.vanbaalenii_PYR-1 -------MPE---TDTRVVGDVADRLFDAIERSDIAVVAQLFSPGIAVWK
MMAR_1488|M.marinum_M -------MPPPPLSSTEAITEVADRLFTAIENGDRAEVDRMWSPDIAVWR
MUL_2451|M.ulcerans_Agy99 -------MPPPPLSSTGAITKVADRLFTAIENGDRAEVDRMWSPDIAVWR
MSMEG_2066|M.smegmatis_MC2_155 -------MPV---IDVDQLDDVANRLFGAIERGDRAAVAALWSEDVRVWH
TH_3318|M.thermoresistible__bu MRRTGNEHEERAVAGSDRLDELATRLFTAIERGDAEAFWCCFEPDGVIVR
:* *** ** ..* . :. . : :
Mflv_4472|M.gilvum_PYR-GCK SGDDRDCDHRRAVKVIDWFVRATVDRRYEITDRRFFDG----GFVQQHIL
Mvan_1887|M.vanbaalenii_PYR-1 SGDTRDNNHARSVKIIRWFVDATVNRRYEVLDRQMFDG----GFVQQHVL
MMAR_1488|M.marinum_M VGARRDNDKARALRVIDWFLSATTERRYEILDRRVFSDESASGFVQQHTL
MUL_2451|M.ulcerans_Agy99 VGARRDNDKARALRVIDWFLSATTERRYEILDRRVFSDESASGFVQQHTL
MSMEG_2066|M.smegmatis_MC2_155 SGDPRDNDRARALRVIDWFIDATAQRHYEILERQFFDG----GFVQQHIV
TH_3318|M.thermoresistible__bu NGTEQRTARSFAERMAGRPADAPAYR-YRRVRREFFAG----GFLEEHEV
* : : : :: *.. * *. *..* . **:::* :
Mflv_4472|M.gilvum_PYR-GCK HATARSGEAIAMRVCIVIVVGDDGLITRIDEYFDPAEMQPLLVGGS-
Mvan_1887|M.vanbaalenii_PYR-1 HAATPAGATIAMRVCIVIKVGGDGLINRIDEYFDPAEIAPLLSHTSS
MMAR_1488|M.marinum_M HATGRAGQVIAMRVCIVIKLDRDGVINRIDEYFDPSELAPLLD----
MUL_2451|M.ulcerans_Agy99 HATGRAGQVIAMRVCIVIKLDRDGVINRIDEYFDPSELAPLLD----
MSMEG_2066|M.smegmatis_MC2_155 HATGRDGAQIDLRVCIVIKVGADGLITRVDEYFDPEDIAPLLDQVGT
TH_3318|M.thermoresistible__bu HVEP-AGTAPVRHACVIGRVGGGGLIRELREYI--------------
*. * :.*:: :. .*:* .: **: