For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3014 | - | - | 100% (377) | NLP/P60 family protein |
M. thermoresistible (build 8) | TH_1403 | - | 2e-47 | 39.94% (333) | NLP/P60 family protein |
M. thermoresistible (build 8) | TH_0436 | - | 1e-31 | 27.31% (454) | Possible inv protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2213c | - | 1e-124 | 60.61% (396) | hypothetical protein Mb2213c |
M. gilvum PYR-GCK | Mflv_2959 | - | 1e-136 | 67.36% (386) | NLP/P60 protein |
M. tuberculosis H37Rv | Rv2190c | - | 1e-124 | 60.61% (396) | hypothetical protein Rv2190c |
M. leprae Br4923 | MLBr_00885 | - | 1e-115 | 57.94% (378) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_1974 | - | 1e-103 | 56.51% (361) | hypothetical protein MAB_1974 |
M. marinum M | MMAR_3234 | - | 1e-122 | 61.50% (387) | hypothetical protein MMAR_3234 |
M. avium 104 | MAV_2304 | - | 1e-118 | 65.90% (346) | NLP/P60 family protein |
M. smegmatis MC2 155 | MSMEG_4256 | - | 1e-147 | 72.51% (382) | NLP/P60 family protein |
M. ulcerans Agy99 | MUL_3545 | - | 1e-117 | 59.38% (389) | hypothetical protein MUL_3545 |
M. vanbaalenii PYR-1 | Mvan_3552 | - | 1e-140 | 68.65% (386) | NLP/P60 protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2959|M.gilvum_PYR-GCK ------MTLDRAHWRIRRYRQTLIGVMTGLAVFGAVLTGQ-AYADPAADA Mvan_3552|M.vanbaalenii_PYR-1 ------MRLDRAHRSTRRTRQPLISAIAGLAVLGAVLTGQ-AYADPAEDA MSMEG_4256|M.smegmatis_MC2_155 ------MRHARAHRPTSRFKRPIAGAIASLALGAGLLAGS-VQADPADDA TH_3014|M.thermoresistible__bu ------LRIDRAHRIIRSVHRPLIALIAGLTLLATGIAAP-GHADPADDA Mb2213c|M.bovis_AF2122/97 ------MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAAN-VLADPADDA Rv2190c|M.tuberculosis_H37Rv ------MRLDQRWLIARVIMRSAIGFFASFTVSSGVLAAN-VLADPADDA MMAR_3234|M.marinum_M ------MRLDCRQLTARVIRRSAIGSLASFTALSGFVAAG-AMADPAEDA MUL_3545|M.ulcerans_Agy99 ------MRLDCRQLTARVIRRSAIGSLASFTALSGFVAAG-AMADQAEDA MAV_2304|M.avium_104 -------------------------------------------------- MLBr_00885|M.leprae_Br4923 ------MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVAT-AMADPAEDA MAB_1974|M.abscessus_ATCC_1997 MSVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDA Mflv_2959|M.gilvum_PYR-GCK LAKMNELSRQAEQTTEAMHSAQLDLNSKLAIQQAAESKHAGDLAAVEAAR Mvan_3552|M.vanbaalenii_PYR-1 LAKLNQLSRQAEQTTEAMHSAQLDLDNKLAIQQAADLKHASDAAAMESAK MSMEG_4256|M.smegmatis_MC2_155 LAKLNELSRQAEQTTEAMHSAQLDLDNKLAAQQAAEKKHSEDAAAAEQAR TH_3014|M.thermoresistible__bu LAKLQELSRQAEQTTEAMHSARLDLEEKLAAQRAAEEKAAADAAAADAAT Mb2213c|M.bovis_AF2122/97 LAKLNELSRQAEQTTEALHSAQLDLNEKLAAQRAADQKLADNRTALDAAR Rv2190c|M.tuberculosis_H37Rv LAKLNELSRQAEQTTEALHSAQLDLNEKLAAQRAADQKLADNRTALDAAR MMAR_3234|M.marinum_M LAKLNELSRQAEQTTEAMHSAELDLGAKLAAQQAAENKLTDDQAALDAAK MUL_3545|M.ulcerans_Agy99 LAKLNELSRQAEQTTEAMHSAELELGAKLAAQQAAENKLTDDQAALDATK MAV_2304|M.avium_104 MAKLNELSRQAEQTTEAMHSAQLDLNEKLAAQRAAEKKHDDDQAAVDAAK MLBr_00885|M.leprae_Br4923 LAKLNELSRQAEQTTEAVHSAQLDLTEKLAAQRAADKKYTDDQAALADAQ MAB_1974|M.abscessus_ATCC_1997 VKKLNELSRQAEATSEAANTAKIDLDAKLAAQRDAEKTVLADEAVAKAAR : *:::****** *:** ::*.::* *** *: *: . : :. : Mflv_2959|M.gilvum_PYR-GCK HRLADYQGKVDKLAAAQYMGGRASGFDAMLTASSPQSLIDQMSVQRVMAT Mvan_3552|M.vanbaalenii_PYR-1 AQLSDFQSKVDHLAAAQYMGGRPSGFDAMLTASSPQGLIDQLSVQRVMAT MSMEG_4256|M.smegmatis_MC2_155 AQLATFQASVNRVAAAQYMGGRTSGVDAILTADSPQQLIDQLAVQRVMAT TH_3014|M.thermoresistible__bu AQLANYQTAVDKLAASQYMGGRTDGFNAILTARSPQQLIDQLAVQRVMAT Mb2213c|M.bovis_AF2122/97 ARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAH Rv2190c|M.tuberculosis_H37Rv ARLATFQTAVNKVAAATYMGGRTHGMDAILTAESPQLLIDRLSVQRVMAH MMAR_3234|M.marinum_M GQLASFQTAVNKVAAAAYMGGRANGMDTILTAPSPQLLIDGLSMQRVMAH MUL_3545|M.ulcerans_Agy99 GQLASFQTAVNKVAAAAYMGGRANGMDTILTAPSPQLLIDGLSMQRVMVH MAV_2304|M.avium_104 AHLASYQNAVNNLAAATYMGGRVDGMEAILTAGSPQGLIDKLAVQRLMAT MLBr_00885|M.leprae_Br4923 VRLATFQAAVNKLAAATYMSGRINGMTALLTAYSPQQLINKLALQRVLGV MAB_1974|M.abscessus_ATCC_1997 MAVSTYQVDVNKAMVAAYMGGTTSGYGAVLTSNSPQNLIDQLSVQRTVGG :: :* *:. .: **.* * ::**: *** **: :::** : Mflv_2959|M.gilvum_PYR-GCK EMQSQMAAFRDAGTQAEIAEQASAASATEAKTAAEQAAAVRADLQSKQSQ Mvan_3552|M.vanbaalenii_PYR-1 EMQAQMTSFREAGRQAEVAEQASAASAAEAKTAAEQAAAVRADLQSKQSQ MSMEG_4256|M.smegmatis_MC2_155 EMATQMQNFRSVGEKAAAAEQASAKSAAEAKTAAEQAAAVRAELQSKQSQ TH_3014|M.thermoresistible__bu EMSEQMHRFRLAQEEAAKAAEASAKSAAEARTAAEQAAAVRAELQAKQSE Mb2213c|M.bovis_AF2122/97 QMSTQMARFKAAGEQAVKAEQAAAKSAADARSAAEQAAAVRANLQHKQSQ Rv2190c|M.tuberculosis_H37Rv QMSTQMARFKAAGEQAVKAEQAAAKSAADARSAAEQAAAVRANLQHKQSQ MMAR_3234|M.marinum_M QMATQMSGFRTAREQAAKAEQASEKSAADAKSAAEQAAAVRANLQHKQSQ MUL_3545|M.ulcerans_Agy99 QMATQMSGFRTAREQTAKAEQASEKSAADAKSAAEQAAAVRANLQHKQSQ MAV_2304|M.avium_104 QMASQMKSYRIAGEQAAKAERESAKSAADAKSAAEQAAAVRASLQSKQSQ MLBr_00885|M.leprae_Br4923 QMATQMAGYRDAGEQAVKAEQTSAKSAADAKHAADQAAVVRAGLQSKQSK MAB_1974|M.abscessus_ATCC_1997 EMRSRMDSYRAAQTSADEAEQRSRDAAEAARVAAEQAKNVRASLQAKQSQ :* :* :: . .: * . : :* *: **:** *** ** ***: Mflv_2959|M.gilvum_PYR-GCK LQTQIAIVKAQYEALTPTQRETLAAAPPPPPVP-----AALPVPPAPGQ- Mvan_3552|M.vanbaalenii_PYR-1 LQVQIAVVKSQYEALTPQQRDVLAAAPPPPPVP-----AAAPVPPPPGQ- MSMEG_4256|M.smegmatis_MC2_155 LQVQIAIVKSQYEALTPQQREALATAPPPPAAPP----APAPDALPPAN- TH_3014|M.thermoresistible__bu LQQQIEVVKAQYEALTPDQREALAAMPPVPPGT--------PTGELPGQH Mb2213c|M.bovis_AF2122/97 LQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPG-APPAALPPG-A Rv2190c|M.tuberculosis_H37Rv LQVQIAVVKSQYVALTPEERTALADPGPVPAVAAIAPG-APPAALPPG-A MMAR_3234|M.marinum_M LQVQIAVVKSQYLALTPDQRTALADPGQVPAGLPGAPG-PAPEGTPPGGP MUL_3545|M.ulcerans_Agy99 LQVQIAVVKSQYLALTPDQRTALVDPGQVPAGLPGAPG-PAPEGTPPGGP MAV_2304|M.avium_104 LQVQIAVVKSQYMSLTADQRTALANPGPAVPAAATAPGAPAPEAAPPG-- MLBr_00885|M.leprae_Br4923 LQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVAT-LPG-----AASAGVS MAB_1974|M.abscessus_ATCC_1997 LQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPP-------AAEPGEAGDA ** ** :**::* :*:. :* *. . .. Mflv_2959|M.gilvum_PYR-GCK DPAILAAPPAPPVP--GAIPPGDIAPPG--SPAATTVIQAALSRIGSPYS Mvan_3552|M.vanbaalenii_PYR-1 DPAVLAAPPAPPAL--GAIPPGDIAPPG--SPVSSTVIQAALSRIGSPYS MSMEG_4256|M.smegmatis_MC2_155 DPGVLAAPPEGIPP--GDIAPPDAAIPGGPSPVSNTVIQAALSRIGSPYS TH_3014|M.thermoresistible__bu DTEVLAAP--GIPP--GDLAP-EAAVPGGPSNDRATVVQAALSRIGSPYS Mb2213c|M.bovis_AF2122/97 PPGDGPAPGVAPPP--GGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYA Rv2190c|M.tuberculosis_H37Rv PPGDGPAPGVAPPP--GGMPGLPFVQPDGAGGDRTAVVQAALTQVGAPYA MMAR_3234|M.marinum_M PPAGAPVPGEAPPP--GGVSAMPFTPPDGAGGDRAAVVQAALTQVGTPYA MUL_3545|M.ulcerans_Agy99 PPAGAPVPGEAPPPGAGGVSAMPFTPPDGAGGDRAAVVQAALTQVGTPYA MAV_2304|M.avium_104 TPPGGPGPGEAPPP--GGAPGMAPGGGGVGGGDRATVVQAALTQVGSPYV MLBr_00885|M.leprae_Br4923 PPPD------AAPP--GGLLGVAP-APFAGGGDRAAVVQAALTQIGSPYA MAB_1974|M.abscessus_ATCC_1997 PEPLMQAAAAAPAP--------EAAIGGGGSPAGAGAVAAALTRIGAPYS . .: ***:::*:** Mflv_2959|M.gilvum_PYR-GCK WGGSGPGAFDCSGLVMWSFQQ-AGIALPHSSQALARGGQPVSTDQMQPGD Mvan_3552|M.vanbaalenii_PYR-1 WGGSGPGAFDCSGLVMWSFQQ-AGISLPHSSQALARGGQPVSMDQMQPGD MSMEG_4256|M.smegmatis_MC2_155 WGGSGPNAFDCSGLVMWSFQQ-AGISLPHSSQALARGGQPVSMDNIQPGD TH_3014|M.thermoresistible__bu WGGSGPNAFDCSGLVMWAFRQGAGINLPHSSQALARGGQPVSMADIQPGD Mb2213c|M.bovis_AF2122/97 WGGAAPGGFDCSGLVMWAFQQ-AGIALPHSSQALAHGGQPVALSDLQPGD Rv2190c|M.tuberculosis_H37Rv WGGAAPGGFDCSGLVMWAFQQ-AGIALPHSSQALAHGGQPVALSDLQPGD MMAR_3234|M.marinum_M WGGAAPGGFDCSGLVMWAFQQ-AGIALPHSSQALAHGGQPVSLSDLQPGD MUL_3545|M.ulcerans_Agy99 WGGAAPGGFDCSGLVMWAFQQ-AGIALPHSSQALAHEGQPVSLSDLQPGD MAV_2304|M.avium_104 WGGAAPGGFDCSGLVMWAFQQ-AGISLPHSSQALAHGGQPVSLSDLQPGD MLBr_00885|M.leprae_Br4923 WGGAAPGGFDCSGLVMWAYQQ-AGIALPHSSQALARGGQPVSLSELQPGD MAB_1974|M.abscessus_ATCC_1997 WGGSGPNAFDCSGLVMWAYGQ-QGVSLPHSSQALARGGTPVSLSELQPGD ***:.*..*********:: * *: *********: * **: ::**** Mflv_2959|M.gilvum_PYR-GCK LVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAPVNN-APIYNVRRY Mvan_3552|M.vanbaalenii_PYR-1 LVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAPVNN-APIHNVRRY MSMEG_4256|M.smegmatis_MC2_155 LVTYYSDASHVGIYIGDGMMVHASTYGSPVRVAPVNN-APIYNVRRY TH_3014|M.thermoresistible__bu VVTYYSDASHAAIYIGNGMMVHASTYGTPVRVAPVNN-APIYNIRRY Mb2213c|M.bovis_AF2122/97 VLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY Rv2190c|M.tuberculosis_H37Rv VLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMDSSGPIYDARRY MMAR_3234|M.marinum_M VLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMNSSGPIYDARRY MUL_3545|M.ulcerans_Agy99 VLTFYSDASHAGIYIGDGLMVHSSTYGVPVRVVPMNSSGPIYDARRY MAV_2304|M.avium_104 VLTFYSDASHAGIYIGDGMMIHSSTYGVPVRVVPMNSSGPIYDARRY MLBr_00885|M.leprae_Br4923 VLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVVPMNSSGPIYDARRY MAB_1974|M.abscessus_ATCC_1997 VINFYGDASHTGIYVGNGMMVHASTYGVPVAVVPITSSGPIYNARRY ::.:*.****..**:*:*:*:*:**** ** *.*: . .**:: ***