For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2526 | - | - | 100% (273) | putative response regulator receiver and ANTAR domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3842 | - | 2e-20 | 29.86% (221) | response regulator receiver/ANTAR domain-containing protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2534c | - | 5e-19 | 28.22% (241) | hypothetical protein MAB_2534c |
M. marinum M | MMAR_1808 | - | 2e-11 | 25.97% (258) | hypothetical protein MMAR_1808 |
M. avium 104 | MAV_4102 | - | 6e-22 | 29.00% (231) | ANTAR domain-containing protein |
M. smegmatis MC2 155 | MSMEG_0672 | - | 2e-28 | 37.70% (191) | hypothetical protein MSMEG_0672 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2553 | - | 9e-20 | 29.09% (220) | response regulator receiver/ANTAR domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment TH_2526|M.thermoresistible__bu -------------------------------MGLNATVEKLIRKAR-ASG MSMEG_0672|M.smegmatis_MC2_155 ----------------------MSGHGGIDTARIEAAFAELVRTS---AD Mflv_3842|M.gilvum_PYR-GCK MRAPRARGSGNLDVLLTRNTRTVTVNDSADVEAAHLRVAELVQGLHNRPD Mvan_2553|M.vanbaalenii_PYR-1 ------------------------MSDPAGVEVTHLRVAELVQGLHNRPD MAV_4102|M.avium_104 ------------------------MREASTTIVTQL--VELVTSLE-REN MAB_2534c|M.abscessus_ATCC_199 ------------------------MTDEAAAGAFSAKIADAARRMQ-QEH MMAR_1808|M.marinum_M ---------------MTATPKDSNPDSVPGGTTADPATVFAALAEIIYQG TH_2526|M.thermoresistible__bu ADTCAVLTELTRSAVGDWPSIQHAGITVVEDGDVVRSIAATDGHVLVVDN MSMEG_0672|M.smegmatis_MC2_155 PDPYVILARITMAAVDELPSVHHAGVTLLGKHGVIRSLAATNGHPLVLDN Mflv_3842|M.gilvum_PYR-GCK ADSDTVVAELAEHAAAEIPGAQYAGITLTRNAKHVETPAATHHWPLLLDK Mvan_2553|M.vanbaalenii_PYR-1 TDSDTVVAELAELAAAEIEGAQYAGITLTRNAKQIETPAATHHWPLLLDK MAV_4102|M.avium_104 SDTAAGLHELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMVLDA MAB_2534c|M.abscessus_ATCC_199 SSVEMTLRSITTAALETVPGVEQAGITLVTGRYEIESRAATSETPRKLDD MMAR_1808|M.marinum_M AQPAEMYSAICIAATLIVPGCDHASLLVRTNDRYIT-VGASDRLAQHVDE .. : . . . *.: : : .*: :* TH_2526|M.thermoresistible__bu IARRLSTGPGIDAALDEDSYRIDDLRADSRWPLFADKVAASTPIRSVIAI MSMEG_0672|M.smegmatis_MC2_155 IQRHCGDGP--SFTADGHVTVIDDLTAETRWPEFTARAVAATPIRSMLEL Mflv_3842|M.gilvum_PYR-GCK IQQRYLEGPCLTAAWEEQTVHVRDLQTEERFPNYRRDALAETPIRSIMAF Mvan_2553|M.vanbaalenii_PYR-1 IQQRYLEGPCLTAAWEEKTVHVRNLETDERFPNYRRDALAETPIRSIMAF MAV_4102|M.avium_104 IQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSF MAB_2534c|M.abscessus_ATCC_199 IQQELREGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLG-VRSMLSF MMAR_1808|M.marinum_M LERKAGDGPCIDAIEEETPQIETDLTTPTQWPKFAAALLAQTPVRGAMGF : .. ** : :* : : :*. : : TH_2526|M.thermoresistible__bu PVGNPIRNPIRNPIASAGTVRAALSLYSDLPGAFDDEVEAVAATYAEHIG MSMEG_0672|M.smegmatis_MC2_155 PLTG------------HGTASATLNLYSNQIGALDDATLAAGLVIAEHAS Mflv_3842|M.gilvum_PYR-GCK QLFI------------ADESLGALNVYSEEPDVFGSEARTLGLIFAAHSS Mvan_2553|M.vanbaalenii_PYR-1 QLFI------------AGETLGALNVYSEQPEAFGDESRTLGLIFAAHSS MAV_4102|M.avium_104 ELFV------------DRTSMAALNFYADPPHAFTEESVELGTVYATHIA MAB_2534c|M.abscessus_ATCC_199 QLFT------------FGENLGALNLYAQSPGAFGADSYDAGLALATHAA MMAR_1808|M.marinum_M RLLVD------------KRKGAALNLFSETPNSFDTESAGRAAVLASFAS : .:*..::: : . * . . TH_2526|M.thermoresistible__bu RVLTARRGRRRAPVSGSARAQGSVRGQDAIETSKAQLMKHFGVDPAAALT MSMEG_0672|M.smegmatis_MC2_155 QIFAPRRSRRRR----KATTRPVTDKAQAIPLPRHHLDAVAVIESRRSVP Mflv_3842|M.gilvum_PYR-GCK VAWNSARR--------EAQFRRALESRDVIGQAKGMIMERYRVDAVRAFE Mvan_2553|M.vanbaalenii_PYR-1 VAWNSARR--------EEQFRQALSSRDVIGQAKGMIMERYRVDAVQAFE MAV_4102|M.avium_104 LAWSMMRR--------QDQFRSALASRDIIGQAKGVIMERFDLDAVEAFE MAB_2534c|M.abscessus_ATCC_199 IVLVAAQR--------ESQWASALASRDVIGQAKGMLMERFSINAAEAFT MMAR_1808|M.marinum_M VAVNAIAHG-----EDAASLRRGLLSNREIGKAVGMLMLLNGFTEEEAFD * . : . :. TH_2526|M.thermoresistible__bu VLLRLSRECNRSLEDVARLLVGPRPVAEPPSQATATATPDHAGGRPPVWA MSMEG_0672|M.smegmatis_MC2_155 RHIRAQHDCA---------------------------------------- Mflv_3842|M.gilvum_PYR-GCK LLRKLSQDSNVPLSKVAADLVAQAQTSNGQTG------------------ Mvan_2553|M.vanbaalenii_PYR-1 LLRKLSQDSNVPLIKIATSLVSDAQASAD--------------------- MAV_4102|M.avium_104 LLTRLSQQSNTRVVDIAAALIDSEHPLKQRRR------------------ MAB_2534c|M.abscessus_ATCC_199 VIRTLSQDFNTKLVEIARAIVEDRPLG----------------------- MMAR_1808|M.marinum_M LLRHHSQSLNIKLADVARTVIENRGQLPPEALETDDTVNPTVSG------ .:. TH_2526|M.thermoresistible__bu EGAA MSMEG_0672|M.smegmatis_MC2_155 ---- Mflv_3842|M.gilvum_PYR-GCK ---- Mvan_2553|M.vanbaalenii_PYR-1 ---- MAV_4102|M.avium_104 ---- MAB_2534c|M.abscessus_ATCC_199 ---- MMAR_1808|M.marinum_M ----