For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2057 | - | 100% (200) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_1160 | hisH | 4e-10 | 29.02% (193) | Probable amidotransferase hisH |
M. thermoresistible (build 8) | TH_1392 | cobQ | 4e-05 | 26.22% (164) | cobyric acid synthase CobQ |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2636c | - | 5e-87 | 83.33% (192) | glutamine amidotransferase subunit PdxT |
M. gilvum PYR-GCK | Mflv_3830 | - | 2e-85 | 82.54% (189) | glutamine amidotransferase subunit PdxT |
M. tuberculosis H37Rv | Rv2604c | - | 5e-87 | 83.33% (192) | glutamine amidotransferase subunit PdxT |
M. leprae Br4923 | MLBr_00474 | - | 7e-81 | 77.78% (189) | glutamine amidotransferase subunit PdxT |
M. abscessus ATCC 19977 | MAB_2890c | - | 5e-75 | 74.60% (189) | glutamine amidotransferase subunit PdxT |
M. marinum M | MMAR_2096 | snoP | 1e-84 | 81.48% (189) | glutamine amidotransferase SnoP |
M. avium 104 | MAV_3482 | - | 1e-83 | 80.42% (189) | glutamine amidotransferase subunit PdxT |
M. smegmatis MC2 155 | MSMEG_2939 | - | 1e-85 | 81.48% (189) | glutamine amidotransferase subunit PdxT |
M. ulcerans Agy99 | MUL_3248 | snoP | 8e-85 | 81.48% (189) | glutamine amidotransferase subunit PdxT |
M. vanbaalenii PYR-1 | Mvan_2566 | - | 8e-86 | 83.87% (186) | glutamine amidotransferase subunit PdxT |
CLUSTAL 2.0.9 multiple sequence alignment MLBr_00474|M.leprae_Br4923 MAAVMQEGLIRFPAGYPADSAVERVVSFPRVGVLALQGDTREHLTALREA MAV_3482|M.avium_104 -------------------------MSAPRIGVLALQGDTREHLAALREA Mb2636c|M.bovis_AF2122/97 -------------------------MSVPRVGVLALQGDTREHLAALREC Rv2604c|M.tuberculosis_H37Rv -------------------------MSVPRVGVLALQGDTREHLAALREC MMAR_2096|M.marinum_M -------------------------MSIPRVGVLALQGDTREHLAALGEA MUL_3248|M.ulcerans_Agy99 -------------------------MSIPRVGVLALQGDTREHLAALGEA Mflv_3830|M.gilvum_PYR-GCK -------------------------MSDPRVGVLALQGDTREHLAALREA Mvan_2566|M.vanbaalenii_PYR-1 -------------------------MSAPQVGVLALQGDTREHLAALREA MSMEG_2939|M.smegmatis_MC2_155 -------------------------MTA-HVGVLALQGDTREHLAALREA TH_2057|M.thermoresistible__bu ------------------------VSARVTIGVLALQGDTREHLAALDAA MAB_2890c|M.abscessus_ATCC_199 --------------------------MSPLVGVLALQGDVREHVAALKDS :********.***::** . MLBr_00474|M.leprae_Br4923 GADSMPVRRRGELDEVDALVIPGGESTTISHLLLDCELLEPLRARLADGL MAV_3482|M.avium_104 GAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKDLDLLEPLRGLLADGL Mb2636c|M.bovis_AF2122/97 GAEPMTVRRRDELDAVDALVIPGGESTTMSHLLLDLDLLGPLRARLADGL Rv2604c|M.tuberculosis_H37Rv GAEPMTVRRRDELDAVDALVIPGGESTTMSHLLLDLDLLGPLRARLADGL MMAR_2096|M.marinum_M GAEPMTVRRRSELDAVDGLVIPGGESTTISHLLCGFDLLEPLRARLAAGL MUL_3248|M.ulcerans_Agy99 GAEPMTVRRRSELDAVDGLVIPGGESTTISHLLCGFDLLEPLRARLAAGL Mflv_3830|M.gilvum_PYR-GCK GAQPGTVRRAAELAAVDALVIPGGESTAMSHLLRELELLEPLRARLADGM Mvan_2566|M.vanbaalenii_PYR-1 GAEARTVRRLDELNSVDALVIPGGESTAMSHLLREFGLLEPLRARLAEGM MSMEG_2939|M.smegmatis_MC2_155 GAEASTVRRLSELAAVDALVIPGGESTAISHLLREFDLLEPLRARIAEGM TH_2057|M.thermoresistible__bu GAEAVTVRRRSDLDAVDALVIPGGESTTMSHLLREFELLDPLRARLAAGM MAB_2890c|M.abscessus_ATCC_199 GAEALGVRRPEELGKVDGLVIPGGESTTMSNLLRVFELLDPLTERLRAGL **:. *** :* **.*********::*:** ** ** : *: MLBr_00474|M.leprae_Br4923 PAYGACTGMILLASEILDAGVCGREALPLGAIDITVRRNAFGRQVDSFEG MAV_3482|M.avium_104 PAYGACAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQVDSFEG Mb2636c|M.bovis_AF2122/97 PAYGSCAGMILLASEILDAGAAGRQALPLRAMNMTVRRNAFGSQVDSFEG Rv2604c|M.tuberculosis_H37Rv PAYGSCAGMILLASEILDAGAAGRQALPLRAMNMTVRRNAFGSQVDSFEG MMAR_2096|M.marinum_M PAYGACAGMIMLASEILDAGVRGRQALPLRGIDMTVRRNAFGRQVDSFEG MUL_3248|M.ulcerans_Agy99 PAYGACAGMIMLASEILDAGVRGRQALPLRGIDMTVRRNAFGRQVDSFEG Mflv_3830|M.gilvum_PYR-GCK PAYGSCAGMILLATEIADAGVPGREALPLSGIDMTVRRNAFGRQVDSFED Mvan_2566|M.vanbaalenii_PYR-1 PAYGSCAGMILLATEIADAGVAGREALPLGGIDMTVRRNAFGRQVDSFEE MSMEG_2939|M.smegmatis_MC2_155 PCYGSCAGMILLATEIADAGVPGRAAVPLKGIDMTVRRNAFGRQVDSFEG TH_2057|M.thermoresistible__bu PAYGSCAGMILLASEILDAGAEGRAAVPLGGIDMTVRRNAFGRQVDSFEG MAB_2890c|M.abscessus_ATCC_199 PVYGSCAGMILLASEILDTRP---DAVALGAIDMTVRRNAFGRQVDSFEG * **:*:***:**:** *: *:.* .:::******** ****** MLBr_00474|M.leprae_Br4923 DIGFAGLVDPVRAVFIRAPWVERAGDGVQVLAQAAGHAVAVRQGSMLATA MAV_3482|M.avium_104 DIAFAGLDVPVRAVFIRAPWVERAGDGVEVLARAAGHVVAVRQGARLATA Mb2636c|M.bovis_AF2122/97 DIEFAGLDDPVRAVFIRAPWVERVGDGVQVLARAAGHIVAVRQGAVLATA Rv2604c|M.tuberculosis_H37Rv DIEFAGLDDPVRAVFIRAPWVERVGDGVQVLARAAGHIVAVRQGAVLATA MMAR_2096|M.marinum_M DIAFTGLDHPVRAVFIRAPWVERVGAGVTVLARAGDHIVAVREGSVLATA MUL_3248|M.ulcerans_Agy99 DIAFTGLDHPVRAVFIRAPWVERVGAGVTVLARAGDHIVAVREGSVLATA Mflv_3830|M.gilvum_PYR-GCK DIAFDGLDGPVHAVFIRAPWVERVGPGVEVLARAAGHPVAVRQGRNLATA Mvan_2566|M.vanbaalenii_PYR-1 DVEFEGLDGPVHAVFIRAPWVERVGPDVEVLARAGGHPVAVRQGKMLATA MSMEG_2939|M.smegmatis_MC2_155 DIDFVGLDTPVHAVFIRAPWVERIGPDVEVLARADDHIVAVRQGPMFATA TH_2057|M.thermoresistible__bu DIEFEGLDAPVHAVFIRAPWVERVGPGVQVLARAAGHIVAVRQGAVLATA MAB_2890c|M.abscessus_ATCC_199 DLDFTGVDGAMHAVFIRAPWVERVGDDVEVLASAQGHPVAVRQGSALATA *: * *: .::*********** * .* *** * .* ****:* :*** MLBr_00474|M.leprae_Br4923 FHPEMTSDRRIHQLFVDIVNGIA MAV_3482|M.avium_104 FHPEMTGDRRIHRLFVDLVTGVV Mb2636c|M.bovis_AF2122/97 FHPEMTGDRRIHQLFVDIVTSAA Rv2604c|M.tuberculosis_H37Rv FHPEMTGDRRIHQLFVDIVTSAA MMAR_2096|M.marinum_M FHPEVTGDRSIHRLFVDIVNGKA MUL_3248|M.ulcerans_Agy99 FHPEVTGDRSIHRLFVDIVNGKA Mflv_3830|M.gilvum_PYR-GCK FHPEVTGDRRVHRLFVDSLR--- Mvan_2566|M.vanbaalenii_PYR-1 FHPEVTGDRRVHRLFVASLS--- MSMEG_2939|M.smegmatis_MC2_155 FHPEVTGDRRIHKLFVDSL---- TH_2057|M.thermoresistible__bu FHPEITGDRRVHELFVDTVISAR MAB_2890c|M.abscessus_ATCC_199 FHPEVTGDRRVHQLFVDMVRAG- ****:*.** :*.*** :