For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSAPQVGVLALQGDTREHLAALREAGAEARTVRRLDELNSVDALVIPGGESTAMSHLLREFGLLEPLRAR LAEGMPAYGSCAGMILLATEIADAGVAGREALPLGGIDMTVRRNAFGRQVDSFEEDVEFEGLDGPVHAVF IRAPWVERVGPDVEVLARAGGHPVAVRQGKMLATAFHPEVTGDRRVHRLFVASLS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_2566 | - | - | 100% (195) | glutamine amidotransferase subunit PdxT |
| M. vanbaalenii PYR-1 | Mvan_2807 | hisH | 1e-08 | 27.22% (180) | imidazole glycerol phosphate synthase subunit HisH |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2636c | - | 1e-82 | 79.06% (191) | glutamine amidotransferase subunit PdxT |
| M. gilvum PYR-GCK | Mflv_3830 | - | 2e-93 | 88.14% (194) | glutamine amidotransferase subunit PdxT |
| M. tuberculosis H37Rv | Rv2604c | - | 1e-82 | 79.06% (191) | glutamine amidotransferase subunit PdxT |
| M. leprae Br4923 | MLBr_00474 | - | 6e-80 | 76.44% (191) | glutamine amidotransferase subunit PdxT |
| M. abscessus ATCC 19977 | MAB_2890c | - | 9e-74 | 73.54% (189) | glutamine amidotransferase subunit PdxT |
| M. marinum M | MMAR_2096 | snoP | 3e-81 | 79.06% (191) | glutamine amidotransferase SnoP |
| M. avium 104 | MAV_3482 | - | 6e-82 | 78.53% (191) | glutamine amidotransferase subunit PdxT |
| M. smegmatis MC2 155 | MSMEG_2939 | - | 5e-89 | 86.24% (189) | glutamine amidotransferase subunit PdxT |
| M. thermoresistible (build 8) | TH_2057 | - | 5e-86 | 83.87% (186) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3248 | snoP | 2e-81 | 79.06% (191) | glutamine amidotransferase subunit PdxT |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_2566|M.vanbaalenii_PYR-1 -------------------------MSAPQVGVLALQGDTREHLAALREA
Mflv_3830|M.gilvum_PYR-GCK -------------------------MSDPRVGVLALQGDTREHLAALREA
MSMEG_2939|M.smegmatis_MC2_155 -------------------------MTA-HVGVLALQGDTREHLAALREA
MLBr_00474|M.leprae_Br4923 MAAVMQEGLIRFPAGYPADSAVERVVSFPRVGVLALQGDTREHLTALREA
MAV_3482|M.avium_104 -------------------------MSAPRIGVLALQGDTREHLAALREA
Mb2636c|M.bovis_AF2122/97 -------------------------MSVPRVGVLALQGDTREHLAALREC
Rv2604c|M.tuberculosis_H37Rv -------------------------MSVPRVGVLALQGDTREHLAALREC
MMAR_2096|M.marinum_M -------------------------MSIPRVGVLALQGDTREHLAALGEA
MUL_3248|M.ulcerans_Agy99 -------------------------MSIPRVGVLALQGDTREHLAALGEA
TH_2057|M.thermoresistible__bu ------------------------VSARVTIGVLALQGDTREHLAALDAA
MAB_2890c|M.abscessus_ATCC_199 --------------------------MSPLVGVLALQGDVREHVAALKDS
:********.***::** .
Mvan_2566|M.vanbaalenii_PYR-1 GAEARTVRRLDELNSVDALVIPGGESTAMSHLLREFGLLEPLRARLAEGM
Mflv_3830|M.gilvum_PYR-GCK GAQPGTVRRAAELAAVDALVIPGGESTAMSHLLRELELLEPLRARLADGM
MSMEG_2939|M.smegmatis_MC2_155 GAEASTVRRLSELAAVDALVIPGGESTAISHLLREFDLLEPLRARIAEGM
MLBr_00474|M.leprae_Br4923 GADSMPVRRRGELDEVDALVIPGGESTTISHLLLDCELLEPLRARLADGL
MAV_3482|M.avium_104 GAESMPVRRRGELEAVDGLVIPGGESTTMSHLLKDLDLLEPLRGLLADGL
Mb2636c|M.bovis_AF2122/97 GAEPMTVRRRDELDAVDALVIPGGESTTMSHLLLDLDLLGPLRARLADGL
Rv2604c|M.tuberculosis_H37Rv GAEPMTVRRRDELDAVDALVIPGGESTTMSHLLLDLDLLGPLRARLADGL
MMAR_2096|M.marinum_M GAEPMTVRRRSELDAVDGLVIPGGESTTISHLLCGFDLLEPLRARLAAGL
MUL_3248|M.ulcerans_Agy99 GAEPMTVRRRSELDAVDGLVIPGGESTTISHLLCGFDLLEPLRARLAAGL
TH_2057|M.thermoresistible__bu GAEAVTVRRRSDLDAVDALVIPGGESTTMSHLLREFELLDPLRARLAAGM
MAB_2890c|M.abscessus_ATCC_199 GAEALGVRRPEELGKVDGLVIPGGESTTMSNLLRVFELLDPLTERLRAGL
**:. *** :* **.*********::*:** ** ** : *:
Mvan_2566|M.vanbaalenii_PYR-1 PAYGSCAGMILLATEIADAGVAGREALPLGGIDMTVRRNAFGRQVDSFEE
Mflv_3830|M.gilvum_PYR-GCK PAYGSCAGMILLATEIADAGVPGREALPLSGIDMTVRRNAFGRQVDSFED
MSMEG_2939|M.smegmatis_MC2_155 PCYGSCAGMILLATEIADAGVPGRAAVPLKGIDMTVRRNAFGRQVDSFEG
MLBr_00474|M.leprae_Br4923 PAYGACTGMILLASEILDAGVCGREALPLGAIDITVRRNAFGRQVDSFEG
MAV_3482|M.avium_104 PAYGACAGMILLASEILDAGAGGREALPLRAIDMTVRRNAFGRQVDSFEG
Mb2636c|M.bovis_AF2122/97 PAYGSCAGMILLASEILDAGAAGRQALPLRAMNMTVRRNAFGSQVDSFEG
Rv2604c|M.tuberculosis_H37Rv PAYGSCAGMILLASEILDAGAAGRQALPLRAMNMTVRRNAFGSQVDSFEG
MMAR_2096|M.marinum_M PAYGACAGMIMLASEILDAGVRGRQALPLRGIDMTVRRNAFGRQVDSFEG
MUL_3248|M.ulcerans_Agy99 PAYGACAGMIMLASEILDAGVRGRQALPLRGIDMTVRRNAFGRQVDSFEG
TH_2057|M.thermoresistible__bu PAYGSCAGMILLASEILDAGAEGRAAVPLGGIDMTVRRNAFGRQVDSFEG
MAB_2890c|M.abscessus_ATCC_199 PVYGSCAGMILLASEILDTRP---DAVALGAIDMTVRRNAFGRQVDSFEG
* **:*:***:**:** *: *:.* .:::******** ******
Mvan_2566|M.vanbaalenii_PYR-1 DVEFEGLDGPVHAVFIRAPWVERVGPDVEVLARAGGHPVAVRQGKMLATA
Mflv_3830|M.gilvum_PYR-GCK DIAFDGLDGPVHAVFIRAPWVERVGPGVEVLARAAGHPVAVRQGRNLATA
MSMEG_2939|M.smegmatis_MC2_155 DIDFVGLDTPVHAVFIRAPWVERIGPDVEVLARADDHIVAVRQGPMFATA
MLBr_00474|M.leprae_Br4923 DIGFAGLVDPVRAVFIRAPWVERAGDGVQVLAQAAGHAVAVRQGSMLATA
MAV_3482|M.avium_104 DIAFAGLDVPVRAVFIRAPWVERAGDGVEVLARAAGHVVAVRQGARLATA
Mb2636c|M.bovis_AF2122/97 DIEFAGLDDPVRAVFIRAPWVERVGDGVQVLARAAGHIVAVRQGAVLATA
Rv2604c|M.tuberculosis_H37Rv DIEFAGLDDPVRAVFIRAPWVERVGDGVQVLARAAGHIVAVRQGAVLATA
MMAR_2096|M.marinum_M DIAFTGLDHPVRAVFIRAPWVERVGAGVTVLARAGDHIVAVREGSVLATA
MUL_3248|M.ulcerans_Agy99 DIAFTGLDHPVRAVFIRAPWVERVGAGVTVLARAGDHIVAVREGSVLATA
TH_2057|M.thermoresistible__bu DIEFEGLDAPVHAVFIRAPWVERVGPGVQVLARAAGHIVAVRQGAVLATA
MAB_2890c|M.abscessus_ATCC_199 DLDFTGVDGAMHAVFIRAPWVERVGDDVEVLASAQGHPVAVRQGSALATA
*: * *: .::*********** * .* *** * .* ****:* :***
Mvan_2566|M.vanbaalenii_PYR-1 FHPEVTGDRRVHRLFVASLS---
Mflv_3830|M.gilvum_PYR-GCK FHPEVTGDRRVHRLFVDSLR---
MSMEG_2939|M.smegmatis_MC2_155 FHPEVTGDRRIHKLFVDSL----
MLBr_00474|M.leprae_Br4923 FHPEMTSDRRIHQLFVDIVNGIA
MAV_3482|M.avium_104 FHPEMTGDRRIHRLFVDLVTGVV
Mb2636c|M.bovis_AF2122/97 FHPEMTGDRRIHQLFVDIVTSAA
Rv2604c|M.tuberculosis_H37Rv FHPEMTGDRRIHQLFVDIVTSAA
MMAR_2096|M.marinum_M FHPEVTGDRSIHRLFVDIVNGKA
MUL_3248|M.ulcerans_Agy99 FHPEVTGDRSIHRLFVDIVNGKA
TH_2057|M.thermoresistible__bu FHPEITGDRRVHELFVDTVISAR
MAB_2890c|M.abscessus_ATCC_199 FHPEVTGDRRVHQLFVDMVRAG-
****:*.** :*.*** :