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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2053 | rpmB | - | 100% (65) | ribosomal protein L28 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2084c | rpmB | 5e-10 | 43.86% (57) | 50S ribosomal protein L28 |
| M. gilvum PYR-GCK | Mflv_4214 | rpmB | 1e-29 | 85.94% (64) | 50S ribosomal protein L28 |
| M. tuberculosis H37Rv | Rv2058c | rpmB | 5e-10 | 43.86% (57) | 50S ribosomal protein L28 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3280 | rpmB | 4e-29 | 81.25% (64) | 50S ribosomal protein L28 |
| M. marinum M | MMAR_1740 | rpmB | 9e-30 | 84.38% (64) | 50S ribosomal protein L28 RpmB2_1 |
| M. avium 104 | MAV_3822 | rpmB | 4e-31 | 87.50% (64) | 50S ribosomal protein L28 |
| M. smegmatis MC2 155 | MSMEG_2400 | rpmB | 6e-29 | 85.71% (63) | 50S ribosomal protein L28 |
| M. ulcerans Agy99 | MUL_1983 | rpmB | 6e-30 | 84.38% (64) | 50S ribosomal protein L28 |
| M. vanbaalenii PYR-1 | Mvan_2153 | rpmB | 1e-28 | 84.38% (64) | 50S ribosomal protein L28 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4214|M.gilvum_PYR-GCK MAAVCEICGKGPGFGKSVSHSHRRTSRRWNPNIQSVRAVSSPGGNKQRVN
Mvan_2153|M.vanbaalenii_PYR-1 MAAVCEICGKGPGFGKSVSHSHRRTSRRWDPNIQSVRAVAAPGGNKHRVN
TH_2053|M.thermoresistible__bu MAAVCDICGKAPGFGKSVSHSHRRHSRRWNPNIQTVRAVARPGGNKQRMN
MMAR_1740|M.marinum_M MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVRAVTRPGGNKKRLN
MUL_1983|M.ulcerans_Agy99 MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNVQTVRAVTRPGGNKKRLN
MAV_3822|M.avium_104 MAAVCDICGKGPGFGKSVSHSHRRTSRRWNPNVQTVHAVARPGGNKQRLN
MAB_3280|M.abscessus_ATCC_1997 MAAVCDVCGKGPGFGKSVSHSHRRTNRRWNPNIQTVHAVTSPGGNKQRVN
MSMEG_2400|M.smegmatis_MC2_155 MAAVCDICGKGPGFGKSVSHSHRRTSRRWNPNIQPVRAVTRPGGNKQRIN
Mb2084c|M.bovis_AF2122/97 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLR
Rv2058c|M.tuberculosis_H37Rv MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLR
*:* *:: *: ****::******* ***.**:* . *.: *:.
Mflv_4214|M.gilvum_PYR-GCK VCTSCLKAG----------KVARG----
Mvan_2153|M.vanbaalenii_PYR-1 VCTSCLKAG----------KVSRG----
TH_2053|M.thermoresistible__bu VCASCLKAG----------KVLRG----
MMAR_1740|M.marinum_M VCTSCIKAG----------KVSRG----
MUL_1983|M.ulcerans_Agy99 VCTSCIKAG----------KVSRG----
MAV_3822|M.avium_104 VCTSCIKAG----------KVVRG----
MAB_3280|M.abscessus_ATCC_1997 ACTSCIKAG----------KVVRGA---
MSMEG_2400|M.smegmatis_MC2_155 ACTSCIKAG----------KVSRA----
Mb2084c|M.bovis_AF2122/97 VSTKGIKVIDRDGIEAVVARLRRQGQRI
Rv2058c|M.tuberculosis_H37Rv VSTKGIKVIDRDGIEAVVARLRRQGQRI
..:. :*. :: *