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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1954 | - | - | 100% (340) | NADH ubiquinone oxidoreductase, 20 kda subunit |
| M. thermoresistible (build 8) | TH_1031 | hybA | 3e-24 | 29.52% (271) | hydrogenase-2, small subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1870 | hyaA | 0.0 | 92.04% (339) | nickel/iron-hydrogenase I small subunit, HyaA |
| M. avium 104 | MAV_2681 | - | 0.0 | 87.61% (339) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
| M. smegmatis MC2 155 | MSMEG_2720 | - | 0.0 | 95.58% (339) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2416 | - | 0.0 | 94.40% (339) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
CLUSTAL 2.0.9 multiple sequence alignment
TH_1954|M.thermoresistible__bu ------------LIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
MSMEG_2720|M.smegmatis_MC2_155 MPTEAAVKAEQALIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
Mvan_2416|M.vanbaalenii_PYR-1 MPSEAAVKAEEALIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
MMAR_1870|M.marinum_M MPTEAAVKAEETLIHVLWINAGLSCDGDSVALTAATQPSVEEIALGALPG
MAV_2681|M.avium_104 MPTQAAVKAEETLIHVLWINAGLSCDGDSVALTAATQPTIEEIALGALPG
**************************::**********
TH_1954|M.thermoresistible__bu LPKIAVHWPLIDFECGPNGGADDFLEWFFKADRGELEPFVLVVEGSIPNE
MSMEG_2720|M.smegmatis_MC2_155 LPKIAVHWPLIDFECGPTGGADDFLAWFFRAERGELDPFVLVVEGSIPNE
Mvan_2416|M.vanbaalenii_PYR-1 LPRIAVHWPLIDFECGPSGGADDFLEWFFRADRGELEPFVLVVEGSIPNE
MMAR_1870|M.marinum_M LPQVAVHWPLIDFECGPSGGADDFLAWFFKAERGELEPFVLVVEGSIPNE
MAV_2681|M.avium_104 LPKIAVHWPLIDFECGPEGGADDFLSWFFKADRGELEPFVLVVEGSIPNE
**::************* ******* ***:*:****:*************
TH_1954|M.thermoresistible__bu QIKNEGYWCGFGNNPATGQPMTTSEWLDRLTPKATAVVAVGTCATYGGIH
MSMEG_2720|M.smegmatis_MC2_155 EIKNEGYWCGFGNDPATGQPITTSEWLDRLTPKATAVVAVGTCATYGGIH
Mvan_2416|M.vanbaalenii_PYR-1 KIKDEGYWCGFGNDPATGQPMTTSEWLDRLAPKATAVVAVGTCATYGGIH
MMAR_1870|M.marinum_M KIKNEGYWCGFGNDPATGQPMTTSEWLDRLTPKATAVVAVGTCATYGGIH
MAV_2681|M.avium_104 NLHDEGYWCGFGNNPGTGQPVTTSEWLDRLAPKATAIVCAGTCSCYGGIH
::::*********:*.****:*********:*****:*..***: *****
TH_1954|M.thermoresistible__bu AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLAETLTYLLY
MSMEG_2720|M.smegmatis_MC2_155 AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLAETLTYLLY
Mvan_2416|M.vanbaalenii_PYR-1 AMAGNPTGAMGVPDYLGWDWKTKAGIPIVCVPGCPIHPDNLAETLTYLLY
MMAR_1870|M.marinum_M AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLSETLTYLLY
MAV_2681|M.avium_104 AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPTQGDNLSETLTYLLY
*********************:************* : ***:********
TH_1954|M.thermoresistible__bu MTTDQAPMIPLDDALRPQWLFGQSVHEGCDRAGYYEQGDFATEYGSPKCI
MSMEG_2720|M.smegmatis_MC2_155 MATDQAPMIPLDDALRPKWLFGQSVHEGCDRAGYYEQGDFATEYGSPKCI
Mvan_2416|M.vanbaalenii_PYR-1 MATDQAPMIPLDDALRPKWLFGATVHEGCDRAGYYEQGDFATEYGSPKCI
MMAR_1870|M.marinum_M MATGQAPMIPLDDALRPKWLFGNTVHEGCDRAGYYEQGDFATEYGSPKCI
MAV_2681|M.avium_104 MATGQAPMIPLDDELRPTWLFGNTVHEGCDRAGYYEQGDFATEYGSPKCI
*:*.********* *** **** :**************************
TH_1954|M.thermoresistible__bu VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
MSMEG_2720|M.smegmatis_MC2_155 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
Mvan_2416|M.vanbaalenii_PYR-1 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
MMAR_1870|M.marinum_M VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
MAV_2681|M.avium_104 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
**************************************************
TH_1954|M.thermoresistible__bu EPPGGKVSTAASTLYGSVIRSLRHITGRTVDKEPRWRQPGTTLESGATRT
MSMEG_2720|M.smegmatis_MC2_155 EPPGGKVSTAASGLYGSAIRSLRHITGRTVDKEPRWRHRGTKLESGATRT
Mvan_2416|M.vanbaalenii_PYR-1 EPPGGKLSSTASGLYGSVIRGLRHITGRTVDKEPRWRHPGTTLETGATRT
MMAR_1870|M.marinum_M EPPGGKLSSTASGLYGTVIRSLRNITERTVDKEPRWRHKGTQLTTGARRT
MAV_2681|M.avium_104 EPPGGLISSTASGLYGSFIRPLRRITGRTLNKEPRWRHKGKQLTTGARRT
***** :*::** ***: ** **.** **::******: *. * :** **
TH_1954|M.thermoresistible__bu W
MSMEG_2720|M.smegmatis_MC2_155 W
Mvan_2416|M.vanbaalenii_PYR-1 W
MMAR_1870|M.marinum_M W
MAV_2681|M.avium_104 W
*