For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPTQAAVKAEETLIHVLWINAGLSCDGDSVALTAATQPTIEEIALGALPGLPKIAVHWPLIDFECGPEGG ADDFLSWFFKADRGELEPFVLVVEGSIPNENLHDEGYWCGFGNNPGTGQPVTTSEWLDRLAPKATAIVCA GTCSCYGGIHAMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPTQGDNLSETLTYLLYMATGQAPMIP LDDELRPTWLFGNTVHEGCDRAGYYEQGDFATEYGSPKCIVKLGCWGPVVKCNVPKRGWINGIGGCPNVG GICIGCTMPGFPDKFMPFMDEPPGGLISSTASGLYGSFIRPLRRITGRTLNKEPRWRHKGKQLTTGARRT W
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_2681 | - | - | 100% (351) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1870 | hyaA | 0.0 | 89.74% (351) | nickel/iron-hydrogenase I small subunit, HyaA |
| M. smegmatis MC2 155 | MSMEG_2720 | - | 0.0 | 86.89% (351) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
| M. thermoresistible (build 8) | TH_1954 | - | 0.0 | 87.61% (339) | NADH ubiquinone oxidoreductase, 20 kda subunit |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2416 | - | 0.0 | 88.60% (351) | NADH ubiquinone oxidoreductase, 20 kDa subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2720|M.smegmatis_MC2_155 MPTEAAVKAEQALIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
TH_1954|M.thermoresistible__bu ------------LIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
Mvan_2416|M.vanbaalenii_PYR-1 MPSEAAVKAEEALIHVLWINAGLSCDGDSVALTAATQPSIEEIALGALPG
MMAR_1870|M.marinum_M MPTEAAVKAEETLIHVLWINAGLSCDGDSVALTAATQPSVEEIALGALPG
MAV_2681|M.avium_104 MPTQAAVKAEETLIHVLWINAGLSCDGDSVALTAATQPTIEEIALGALPG
**************************::**********
MSMEG_2720|M.smegmatis_MC2_155 LPKIAVHWPLIDFECGPTGGADDFLAWFFRAERGELDPFVLVVEGSIPNE
TH_1954|M.thermoresistible__bu LPKIAVHWPLIDFECGPNGGADDFLEWFFKADRGELEPFVLVVEGSIPNE
Mvan_2416|M.vanbaalenii_PYR-1 LPRIAVHWPLIDFECGPSGGADDFLEWFFRADRGELEPFVLVVEGSIPNE
MMAR_1870|M.marinum_M LPQVAVHWPLIDFECGPSGGADDFLAWFFKAERGELEPFVLVVEGSIPNE
MAV_2681|M.avium_104 LPKIAVHWPLIDFECGPEGGADDFLSWFFKADRGELEPFVLVVEGSIPNE
**::************* ******* ***:*:****:*************
MSMEG_2720|M.smegmatis_MC2_155 EIKNEGYWCGFGNDPATGQPITTSEWLDRLTPKATAVVAVGTCATYGGIH
TH_1954|M.thermoresistible__bu QIKNEGYWCGFGNNPATGQPMTTSEWLDRLTPKATAVVAVGTCATYGGIH
Mvan_2416|M.vanbaalenii_PYR-1 KIKDEGYWCGFGNDPATGQPMTTSEWLDRLAPKATAVVAVGTCATYGGIH
MMAR_1870|M.marinum_M KIKNEGYWCGFGNDPATGQPMTTSEWLDRLTPKATAVVAVGTCATYGGIH
MAV_2681|M.avium_104 NLHDEGYWCGFGNNPGTGQPVTTSEWLDRLAPKATAIVCAGTCSCYGGIH
::::*********:*.****:*********:*****:*..***: *****
MSMEG_2720|M.smegmatis_MC2_155 AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLAETLTYLLY
TH_1954|M.thermoresistible__bu AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLAETLTYLLY
Mvan_2416|M.vanbaalenii_PYR-1 AMAGNPTGAMGVPDYLGWDWKTKAGIPIVCVPGCPIHPDNLAETLTYLLY
MMAR_1870|M.marinum_M AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPIHPDNLSETLTYLLY
MAV_2681|M.avium_104 AMAGNPTGAMGVPDYLGWDWKSKAGIPIVCVPGCPTQGDNLSETLTYLLY
*********************:************* : ***:********
MSMEG_2720|M.smegmatis_MC2_155 MATDQAPMIPLDDALRPKWLFGQSVHEGCDRAGYYEQGDFATEYGSPKCI
TH_1954|M.thermoresistible__bu MTTDQAPMIPLDDALRPQWLFGQSVHEGCDRAGYYEQGDFATEYGSPKCI
Mvan_2416|M.vanbaalenii_PYR-1 MATDQAPMIPLDDALRPKWLFGATVHEGCDRAGYYEQGDFATEYGSPKCI
MMAR_1870|M.marinum_M MATGQAPMIPLDDALRPKWLFGNTVHEGCDRAGYYEQGDFATEYGSPKCI
MAV_2681|M.avium_104 MATGQAPMIPLDDELRPTWLFGNTVHEGCDRAGYYEQGDFATEYGSPKCI
*:*.********* *** **** :**************************
MSMEG_2720|M.smegmatis_MC2_155 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
TH_1954|M.thermoresistible__bu VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
Mvan_2416|M.vanbaalenii_PYR-1 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
MMAR_1870|M.marinum_M VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
MAV_2681|M.avium_104 VKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIGCTMPGFPDKFMPFMD
**************************************************
MSMEG_2720|M.smegmatis_MC2_155 EPPGGKVSTAASGLYGSAIRSLRHITGRTVDKEPRWRHRGTKLESGATRT
TH_1954|M.thermoresistible__bu EPPGGKVSTAASTLYGSVIRSLRHITGRTVDKEPRWRQPGTTLESGATRT
Mvan_2416|M.vanbaalenii_PYR-1 EPPGGKLSSTASGLYGSVIRGLRHITGRTVDKEPRWRHPGTTLETGATRT
MMAR_1870|M.marinum_M EPPGGKLSSTASGLYGTVIRSLRNITERTVDKEPRWRHKGTQLTTGARRT
MAV_2681|M.avium_104 EPPGGLISSTASGLYGSFIRPLRRITGRTLNKEPRWRHKGKQLTTGARRT
***** :*::** ***: ** **.** **::******: *. * :** **
MSMEG_2720|M.smegmatis_MC2_155 W
TH_1954|M.thermoresistible__bu W
Mvan_2416|M.vanbaalenii_PYR-1 W
MMAR_1870|M.marinum_M W
MAV_2681|M.avium_104 W
*