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aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1363 | secD | - | 100% (336) | PROBABLE PROTEIN-EXPORT MEMBRANE PROTEIN SECD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2618c | secD | 1e-150 | 81.01% (337) | preprotein translocase subunit SecD |
M. gilvum PYR-GCK | Mflv_3816 | secD | 1e-156 | 84.73% (334) | preprotein translocase subunit SecD |
M. tuberculosis H37Rv | Rv2587c | secD | 1e-150 | 81.31% (337) | preprotein translocase subunit SecD |
M. leprae Br4923 | MLBr_00487 | secD | 1e-144 | 78.04% (337) | preprotein translocase subunit SecD |
M. abscessus ATCC 19977 | MAB_2880c | secD | 1e-141 | 76.74% (331) | preprotein translocase subunit SecD |
M. marinum M | MMAR_2120 | secD | 1e-151 | 80.77% (338) | protein-export membrane protein SecD |
M. avium 104 | MAV_3468 | secD | 1e-147 | 79.59% (338) | preprotein translocase subunit SecD |
M. smegmatis MC2 155 | MSMEG_2961 | secD | 1e-156 | 83.88% (335) | preprotein translocase subunit SecD |
M. ulcerans Agy99 | MUL_1725 | secD | 1e-151 | 80.77% (338) | preprotein translocase subunit SecD |
M. vanbaalenii PYR-1 | Mvan_2583 | secD | 1e-154 | 83.23% (334) | preprotein translocase subunit SecD |
CLUSTAL 2.0.9 multiple sequence alignment Mb2618c|M.bovis_AF2122/97 --------------------------MASSSAPVHPARYLSVFLVMLIGI Rv2587c|M.tuberculosis_H37Rv --------------------------MASSSAPVHPARYLSVFLVMLIGI MMAR_2120|M.marinum_M --------------------------MASSSAPVHPARYLSVFLVLLIGV MUL_1725|M.ulcerans_Agy99 --------------------------MASSSAPVHPARYLSVFLVLLIGV MLBr_00487|M.leprae_Br4923 MSCVKGLVMRHVGSVGKNRFRGDTRNVASSSAPVHFGRYLSMFLVLFIGV MAV_3468|M.avium_104 --------------------------MASSSVPVHPARYLSVFLLLLVGV Mflv_3816|M.gilvum_PYR-GCK --------------------------MASSST-VHPARYLALFLVLLIGA Mvan_2583|M.vanbaalenii_PYR-1 --------------------------MASSST-VHPARYLALFLAMLIGA TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 --------------------------MASSSAPVHPARYLTLFLVLLVGV MAB_2880c|M.abscessus_ATCC_199 --------------------------MASSSAPVHPMRYLAAFLVLLIGA Mb2618c|M.bovis_AF2122/97 YLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQQII Rv2587c|M.tuberculosis_H37Rv YLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQQII MMAR_2120|M.marinum_M YLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQQII MUL_1725|M.ulcerans_Agy99 YLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQQII MLBr_00487|M.leprae_Br4923 YLLAFLTGDKRVVPRLGIDLQGGTRVTLTARTPDGSRPSREALSQAQQII MAV_3468|M.avium_104 YLLVFLTGDKRAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQQII Mflv_3816|M.gilvum_PYR-GCK FLLVFFTGDKKPDPKLGIDLQGGTRVTLTARTPDGSEPSRDALLQAQQII Mvan_2583|M.vanbaalenii_PYR-1 YLLVFLTGDKKPDPKLGIDLQGGTRVTLTARTPDGSPPSRESLDQAKQII TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 YLLVFLTGDKKPEPKLGIDLQGGTRVTLTARTPDGSAPTRDALNQAQQII MAB_2880c|M.abscessus_ATCC_199 YLLVFLTGDKQPKPKLGIDLQGGTRVTLTARTPDGSKPTKEALTQAQQII Mb2618c|M.bovis_AF2122/97 SARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRPVLNS Rv2587c|M.tuberculosis_H37Rv SARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRPVLNS MMAR_2120|M.marinum_M SARVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRPVMNS MUL_1725|M.ulcerans_Agy99 SARVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRPVMNS MLBr_00487|M.leprae_Br4923 SSRVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRPVLNS MAV_3468|M.avium_104 SARVNGLGVSGSEVVVDGDNLIITVPGNDGNEARNLGQTARLYIRPVLNS Mflv_3816|M.gilvum_PYR-GCK SARVDGLGVSGSEVIIDGNNLVITVPGDDTSEARSLGQTARLYIRPVVHA Mvan_2583|M.vanbaalenii_PYR-1 GARVDGLGVSGSEVIIDGQNLVITVPGDDTSEARSLGQTARLYIRPVVHV TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 SARVDGLGVSGSEVVIDGDNLVITVPGNDGNEARNLGQTARLYIRPVIHA MAB_2880c|M.abscessus_ATCC_199 NARVNGLGVSGSEVIIDGDNLVITVPGNDGSEARNLGQTAKLYIRPVVQA Mb2618c|M.bovis_AF2122/97 MPAQPAAEEPQ-----------PAPSAEPQ-------------------- Rv2587c|M.tuberculosis_H37Rv MPAQPAAEEPQ-----------PAPSAEPQ-------------------- MMAR_2120|M.marinum_M MPAQPAAQEPQQ-EPQQPGGTAPAPGGPAP-------------------- MUL_1725|M.ulcerans_Agy99 MPAQPAAQEPQQ-EPQQPGGTAPAPGGPAP-------------------- MLBr_00487|M.leprae_Br4923 LPVQ---------------------RGQDP-------------------- MAV_3468|M.avium_104 MPAQSGEPKPAPRQPAQPAPGQPAPGQPAPGQP----------------- Mflv_3816|M.gilvum_PYR-GCK IPAGEGAAPGGAPEGMPPGAIPGMPGGVPGMPPGAIPGMP-PGAIPGMPG Mvan_2583|M.vanbaalenii_PYR-1 IPS-AAAAP---PEQAGPQGVP--PGGVPGVPPGAVPGLP-PGAVP---- TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 MAAQPPTEDGQPPAGAP--GAPGAPGGAPGAP--GLPGLPGLSGLPGMPG MAB_2880c|M.abscessus_ATCC_199 VPAQPKENP--------------EPG--AGAP------------------ Mb2618c|M.bovis_AF2122/97 ---PPGQP---AAPPPAQ--SGAPASPQ------PGAQPRPYPQDP---- Rv2587c|M.tuberculosis_H37Rv ---PPGQP---AAPPPAQ--SGAPASPQ------PGAQPRPYPQDP---- MMAR_2120|M.marinum_M ---NAGQPPESGAPASPQ--SGAPAAPQSGTPGRPGAQPRPYPQDPPPSP MUL_1725|M.ulcerans_Agy99 ---NAGQPPESSAPASPQ--SGAPAAPQSGTPGRPGAQPRPYPQDPPPSP MLBr_00487|M.leprae_Br4923 ---KPGSP-----AGTLP--NFAPMPPD-----HPGAQPRPYLQDP---- MAV_3468|M.avium_104 ---APGQPAPGQPAPGQP--APAPAQPG-----AAPAQPRPYPQDPPPSP Mflv_3816|M.gilvum_PYR-GCK DA-MPGMPEGAMP-LPPG--ALQGGPGGPGEPVAPAPQPRPFPQQP---- Mvan_2583|M.vanbaalenii_PYR-1 ----PGAPPGAVPGLPPA--AVP--PEAPPASDTPAPQPRPFPQQP---- TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 APGAPGAPQEAPPGMPVPGEAPGGEAPAPPAGEQPAPQPRPYPLEP---- MAB_2880c|M.abscessus_ATCC_199 ---QQGQPAPAKEATPPAPGAGKSTPAAPP---SPKPQPRPYPAQT---- Mb2618c|M.bovis_AF2122/97 --APSPNPTSPASPPPA--------PPAEAPAT-DPRKDLAERIAQEKKL Rv2587c|M.tuberculosis_H37Rv --APSPNPTSPASPPPA--------PPAEAPAT-DPRKDLAERIAQEKKL MMAR_2120|M.marinum_M APAPSPAPTGSPAPPATGAQQPADLPPGEEPALPDPRKDLAERIAQEKKW MUL_1725|M.ulcerans_Agy99 APAPSPAPTGSPAPPATGAQQPADLPPGEEPALPDPRKDLAERIAQEKKW MLBr_00487|M.leprae_Br4923 --TSSPSSDPMPSPVPTGAALPGEVPSVEQPAPPDPRKDLAERIAEEKKW MAV_3468|M.avium_104 SPAPAPAPAPGPAPAPAPAPAPGEAPPGEQPAPPDPRKDLAERIAEEKKW Mflv_3816|M.gilvum_PYR-GCK --APSPAPEPPADPAAP-IPPGTPAGPGGMPADDEN-LSLADQIKQEKLR Mvan_2583|M.vanbaalenii_PYR-1 --APTPPPGPSPAPGPT-PPP----APGTAPPADQD-VPLATRIQDEKRL TH_1363|M.thermoresistible__bu -------------------------------------------------- MSMEG_2961|M.smegmatis_MC2_155 --APTPG-EPTPAPAPE-PAPGENPPAAPAPGADGDKADLAQRIATAKQW MAB_2880c|M.abscessus_ATCC_199 --TTPPPPPPATQPATP-NATTAPAPPADLPPKPGSGEERKQLIDFEKQI Mb2618c|M.bovis_AF2122/97 RQSTNQYMQMVALQFQATRCES-DDILAGNDDPKLPLVTCSTD---HKTA Rv2587c|M.tuberculosis_H37Rv RQSTNQYMQMVALQFQATRCES-DDILAGNDDPKLPLVTCSTD---HKTA MMAR_2120|M.marinum_M RQSTNQYIQMVALQFEATQCGK-DDILAGNDDPKLPLVTCSTD---HKTA MUL_1725|M.ulcerans_Agy99 RQSTNQYIQMVALQFEATQCGK-DDILAGNDDPKLPLVTCSTD---HKTA MLBr_00487|M.leprae_Br4923 RQSTKQSIQFLALQFESTHCDK-DDILAGNDDPNLPLATCSTD---HNMA MAV_3468|M.avium_104 RQSTRQGIQFLALQFQATRCDK-DDILAGNDDPAQPLITCSTD---HKVA Mflv_3816|M.gilvum_PYR-GCK RQSSDQMIQILAMQLQASQCGQ-EDVLAGNDDPNLPLITCSQD---GTTV Mvan_2583|M.vanbaalenii_PYR-1 RQSTEQAIQILALQFQATRCGQ-EDVLAGNDDPNLPLVTCSQD---GNEV TH_1363|M.thermoresistible__bu -------------------------VLAGNDDPELPLITCSTD---GQTV MSMEG_2961|M.smegmatis_MC2_155 RQSTDPTMQILGLQVQANLCGE-DDILAGNDDPNLPLITCSTD---GSTV MAB_2880c|M.abscessus_ATCC_199 RQSEDPRIQMLALQVQASRCYDPDDPLAGNDDPNLPLVTCGDDSQGGKAA ******* ** **. * . Mb2618c|M.bovis_AF2122/97 YLLAPSIISGDQIQNATSGMD-QRGIGYVVDLQFKGPAANIWADYTAAH- Rv2587c|M.tuberculosis_H37Rv YLLAPSIISGDQIQNATSGMD-QRGIGYVVDLQFKGPAANIWADYTAAH- MMAR_2120|M.marinum_M YLLAPSIISGDQIQNATSGMD-QRSIGYVVDLQFKSQAANTWADYTAAH- MUL_1725|M.ulcerans_Agy99 YLLAPSIISGDQIQNATSGMD-QRSIGYVVDLQFKSQAANTWADYTAAH- MLBr_00487|M.leprae_Br4923 YLLAPSIISGDQIQNSTSGMN-QRGVGYVVDLQFKSAAADVWADFTAAH- MAV_3468|M.avium_104 YLLGPSIISGDQIKDASASQN-QRGIGFVVDLQFKPAAANTWADFTAAH- Mflv_3816|M.gilvum_PYR-GCK YLLDKSIIAGEEIANATSGLN-QQAGEYVVDLEFKDQGSKTWAEFTAAN- Mvan_2583|M.vanbaalenii_PYR-1 YLLDKSIISGEQIANASSGLN-QQAGEYVVDVEFKSDAAKVWADFTAAN- TH_1363|M.thermoresistible__bu YLLNKSIISGEQIENASSGRDPQRGGEYVVDLQFKGDATDIWADFTAAN- MSMEG_2961|M.smegmatis_MC2_155 YLLNKSIMSGEEIKNATSGLD-QQQGQYVVDVEFKSGGAQTWADFTAAN- MAB_2880c|M.abscessus_ATCC_199 YLLDKSIISGEEIKDASSGLD-QQRGIYVVSMEFKPTGAKVWADYTSAHW *** **::*::* ::::. : *: :**.::** .:. **::*:*: Mb2618c|M.bovis_AF2122/97 -IGTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVL Rv2587c|M.tuberculosis_H37Rv -IGTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVL MMAR_2120|M.marinum_M -IGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVL MUL_1725|M.ulcerans_Agy99 -IGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVL MLBr_00487|M.leprae_Br4923 -IGTQTAFTLDSEVVSVPVINEAILGGRTQISGGDPPFTAATARQLANVL MAV_3468|M.avium_104 -IGTQTAFTLDSQVVSAPMIQEAIPGGRTQISGGDPPFTAATAKQLANVL Mflv_3816|M.gilvum_PYR-GCK -VGVQTAFVLDSKVVSAPVINEPIPGGKTQITG---QFTQDTARELANVL Mvan_2583|M.vanbaalenii_PYR-1 -VGTQTAFVLDSQVVSAPVIQEAIPGGRTQITG---QFTQTTARELANVL TH_1363|M.thermoresistible__bu -VGTQTAFVLDSKVVSAPQIQEPIPGGRTQITG---RFNAETAKELANVL MSMEG_2961|M.smegmatis_MC2_155 -VGTQTAFTLDSKVVSAPEIREAIPGGNTQITG---QFTADSAKELANVL MAB_2880c|M.abscessus_ATCC_199 QQGTQTAFTLDSKVISAPAIREPIPGGKTEISG---QFTSDSAKQLAAAL *.****.***:*:*.* * *.* **.*:*:* *. :*::** .* Mb2618c|M.bovis_AF2122/97 KYGSLPLSFEPSEAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRV Rv2587c|M.tuberculosis_H37Rv KYGSLPLSFEPSEAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRV MMAR_2120|M.marinum_M KYGSLPLSFESSEAQTVSATLGLTSLRAGLIAGAIGLALVLLYSLLYYRV MUL_1725|M.ulcerans_Agy99 KYGSLPLSFESSEAQTVSATLGLTSLRAGLIAGAIGLALVLLYSLLYYRV MLBr_00487|M.leprae_Br4923 KYGSLPLSFEPSEAQTVSATLGLTSLRAGLIAGAIGLSLVLLYSLLYYRV MAV_3468|M.avium_104 KYGSLPLSFQSSEAQTVSATLGLTSLRAGLIAGAIGLLLVLLYSLLYYRV Mflv_3816|M.gilvum_PYR-GCK KYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAVGLAAVLLYSLLYYRA Mvan_2583|M.vanbaalenii_PYR-1 KYGSLPLSFESSEAETVSATLGLSSLRAGLIAGVVGLVAVLLYSLLYYRV TH_1363|M.thermoresistible__bu KYGSLPLSFEASEAETVSPTLGLNSLRAGLIAGAVGLAAVLLYSLLYYRL MSMEG_2961|M.smegmatis_MC2_155 KYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRV MAB_2880c|M.abscessus_ATCC_199 KYGSLPLSFESSDAQTVSATLGLTSLKAGLIAGAIGLAIVLLYSLIYYRV *********:.*:*:***.****.**:**:***.:** **:***:*** Mb2618c|M.bovis_AF2122/97 LGLLTALSLVASGSMVFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSF Rv2587c|M.tuberculosis_H37Rv LGLLTALSLVASGSMVFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSF MMAR_2120|M.marinum_M LGLLTALSLIASGAMVFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSF MUL_1725|M.ulcerans_Agy99 LGLLTALSLIASGAMVFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSF MLBr_00487|M.leprae_Br4923 LGLLTAFSLFCSGTIIFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSF MAV_3468|M.avium_104 LGLLTALSLAASGAMVFAILILLGRYINYTLDLAGIAGLIIGIGTTADSF Mflv_3816|M.gilvum_PYR-GCK LGVLIALSLVASGAMVFAILVLLGRYINYTLDLAGIAGLIIGIGMTADSF Mvan_2583|M.vanbaalenii_PYR-1 LGVLIALSLTASGAMVFAILVLLGRYISYTLDLAGIAGLIIGIGMTADSF TH_1363|M.thermoresistible__bu LGVLTALSLVAAGALVYAVLVLLGRYINYTLDLAGVAGLIIGIGTTADSF MSMEG_2961|M.smegmatis_MC2_155 LGLLVALSLVAAGAVVYAILVLLGRYIGYTLDLAGIAGLIIGIGTTADSF MAB_2880c|M.abscessus_ATCC_199 LGLLTALSLVASGAMVFAILVLLGRYISYTLDLAGIAGLIIGIGTTADSF **:* *:** .:*::::*:*:******.*******:******** ***** Mb2618c|M.bovis_AF2122/97 VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGSAVTFLAAAVLYFLA Rv2587c|M.tuberculosis_H37Rv VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLA MMAR_2120|M.marinum_M VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLA MUL_1725|M.ulcerans_Agy99 VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLA MLBr_00487|M.leprae_Br4923 VVFFERIKDEIREGRSFRSAVPRGWVRARKTIVSGNAVTFLAAAVLHFLA MAV_3468|M.avium_104 VVFFERIKDEIREGRTFRSAVPRGWTRARKTIVSGNAVTFLAAAVLYFLA Mflv_3816|M.gilvum_PYR-GCK VVFFERIKDEIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYFLA Mvan_2583|M.vanbaalenii_PYR-1 VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTLLAAAVLYFLA TH_1363|M.thermoresistible__bu VVFFERIKDEIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYFLA MSMEG_2961|M.smegmatis_MC2_155 VVFFERIKDEIREGRSFRSAVPRGWVRARKTIVSGNAVTFLAAAVLYVLA MAB_2880c|M.abscessus_ATCC_199 VVFFERIKDEIREGRSYRSAVPRGWARARKTILSGNAVTLLAAVVLYILA ***************::********.******:**.***:***.**:.** Mb2618c|M.bovis_AF2122/97 IGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKPAYNGLGAV Rv2587c|M.tuberculosis_H37Rv IGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKPAYNGLGAV MMAR_2120|M.marinum_M IGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAV MUL_1725|M.ulcerans_Agy99 IGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAV MLBr_00487|M.leprae_Br4923 IGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPLLARPAYNGLGAV MAV_3468|M.avium_104 IGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPTLAKPAYNGLGAV Mflv_3816|M.gilvum_PYR-GCK VGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKSPLWAKPSLNGLGAV Mvan_2583|M.vanbaalenii_PYR-1 VGQVKGFAFTLGLTTILDIVVVFLVTWPLVYMASKSTLWAKPSLNGLGAV TH_1363|M.thermoresistible__bu IGQVKGFAFTLGLTTIFDVMVVFLVTWPLVYLASKSPTLAKPSLNGLGAV MSMEG_2961|M.smegmatis_MC2_155 IGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPTMAKPKLNGLGAV MAB_2880c|M.abscessus_ATCC_199 IGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLSSKSATLSKPAYNGLGAV :***************:*::***********::***. ::* ****** Mb2618c|M.bovis_AF2122/97 QQVARERRA--------MARTGRG- Rv2587c|M.tuberculosis_H37Rv QQVARERRA--------MARTGRG- MMAR_2120|M.marinum_M QQVARERRASDSRTRSGIAKTGRG- MUL_1725|M.ulcerans_Agy99 QQVARERRASDSRTRSGIAKTGRE- MLBr_00487|M.leprae_Br4923 QQVARERRAS--------AKTGRG- MAV_3468|M.avium_104 QQVARERRAA------AHVSTGQG- Mflv_3816|M.gilvum_PYR-GCK QQIARERR-------AAATAAGRG- Mvan_2583|M.vanbaalenii_PYR-1 QQIARERR-------AAASAAGRG- TH_1363|M.thermoresistible__bu QQIARERR-------AARATTGQGI MSMEG_2961|M.smegmatis_MC2_155 QQIARERRE------VSHATAGRG- MAB_2880c|M.abscessus_ATCC_199 QQIARERKA------AAHA------ **:****: