For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1214 | thiD | - | 100% (279) | PROBABLE PHOSPHOMETHYLPYRIMIDINE KINASE THID (HMP-PHOSPHATE KINASE) (HMP-P KINASE) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0430c | thiD | 1e-106 | 72.45% (265) | phosphomethylpyrimidine kinase |
M. gilvum PYR-GCK | Mflv_0181 | - | 1e-125 | 78.18% (275) | phosphomethylpyrimidine kinase |
M. tuberculosis H37Rv | Rv0422c | thiD | 1e-106 | 72.45% (265) | phosphomethylpyrimidine kinase |
M. leprae Br4923 | MLBr_00295 | thiD | 1e-111 | 70.25% (279) | phosphomethylpyrimidine kinase |
M. abscessus ATCC 19977 | MAB_4197 | - | 1e-114 | 73.36% (274) | phosphomethylpyrimidine kinase |
M. marinum M | MMAR_0734 | thiD | 1e-113 | 72.83% (276) | phosphomethylpyrimidine kinase ThiD |
M. avium 104 | MAV_4732 | thiD | 1e-111 | 72.73% (275) | phosphomethylpyrimidine kinase |
M. smegmatis MC2 155 | MSMEG_0825 | thiD | 1e-121 | 76.09% (276) | phosphomethylpyrimidine kinase |
M. ulcerans Agy99 | MUL_3599 | thiD | 1e-113 | 72.10% (276) | phosphomethylpyrimidine kinase |
M. vanbaalenii PYR-1 | Mvan_0724 | - | 1e-127 | 80.07% (276) | phosphomethylpyrimidine kinase |
CLUSTAL 2.0.9 multiple sequence alignment TH_1214|M.thermoresistible__bu ---------VTYLPLPEPGQTPLRVLTIAGSDSGGGAGIQADLRTFAMLG MSMEG_0825|M.smegmatis_MC2_155 ---------MKLLPLTPPGQTPTRVMTIAGTDSGGGAGIQADLRTFAMLG Mflv_0181|M.gilvum_PYR-GCK MTHSTTATTSSFLPLTPAGQTPLRVLTIAGSDSGGGAGIQADMRTFALLG Mvan_0724|M.vanbaalenii_PYR-1 ---------MTFLPLTPPGQTPLRVMTIAGSDSGGGAGIQADMRTFALLG MAB_4197|M.abscessus_ATCC_1997 -------MRSPFLPLPEPGTTPVRAMTIAGSDSGGGAGIQADMRTMALLG Mb0430c|M.bovis_AF2122/97 -------------------MTPPRVLSIAGSDSGGGAGIQADMRTMALLG Rv0422c|M.tuberculosis_H37Rv -------------------MTPPRVLSIAGSDSGGGAGIQADMRTMALLG MAV_4732|M.avium_104 -----MTGPPPTLPLAPPGTTPRRVLSIAGSDSGGGAGIQADLRTMAMLG MLBr_00295|M.leprae_Br4923 ---------MNYLPAPPPGTTPLRVLSIAGSDSGGGAGIQADMRTMTVLG MMAR_0734|M.marinum_M ---------MSWLPLAPPGATPLRALTIAGSDSGGGAGIQADMRTMALLG MUL_3599|M.ulcerans_Agy99 ---------MSWLPLAPPGATPLRALTIAGSDSGGGAGIQADMRTMALLG ** *.::***:***********:**:::** TH_1214|M.thermoresistible__bu VHGLVAVAAVTVQNSVGVSGFHEIPVQVVADQIVAVASDIGLQAAKTGML MSMEG_0825|M.smegmatis_MC2_155 VHGCVAVAAVTVQNSVGVKGFHEVPVDIIAGQIQVVAEDIGIQAAKTGML Mflv_0181|M.gilvum_PYR-GCK VHSLVAVTAVTVQNSLGVKGFHEIPLDVIAGQIEAVASDIGLQAAKTGML Mvan_0724|M.vanbaalenii_PYR-1 LHGLVAVTAVTVQNSVGVKGFHEIPLDVVAGQIEAVASDIGLQAAKTGML MAB_4197|M.abscessus_ATCC_1997 VHGCVAVTAVTVQNSLGVKDFHEIPPPIVAAQMEVVITDIGIQAAKTGML Mb0430c|M.bovis_AF2122/97 VHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQIEAVVTDIGVQAAKTGML Rv0422c|M.tuberculosis_H37Rv VHACVAVTAVTVQNTLGVKDIHEVPNDVVAGQIEAVVTDIGVQAAKTGML MAV_4732|M.avium_104 VHACVAVTAVTAQNTLGVNSFHEVPADVVAGQIEAVAGDIGIQAAKTGML MLBr_00295|M.leprae_Br4923 VHACTAVTAVTIQNTLGVEGFHEIPAEIVASQIKAVVTDIGIQSAKTGML MMAR_0734|M.marinum_M VHACVAVTAVTVQNTLGVKGFHETPEDVVAGQITAVVEDIGIQAAKTGML MUL_3599|M.ulcerans_Agy99 VHACVVVTAVTVQNTLGVKGFHETPEDVVAGQITAVVEDIGIQAAKTGML :*. ..*:*** **::**..:** * ::* *: .* ***:*:****** TH_1214|M.thermoresistible__bu ASSEIIETVAETARGQGIGTAVPLVVDPVCASMHGDPLLHMSALDALRTK MSMEG_0825|M.smegmatis_MC2_155 ASAEIIGAVAETWRG--LGTEAPLVVDPVCASMHGDPLLHPSALDSVRNE Mflv_0181|M.gilvum_PYR-GCK ASSEIIETIADTWVAQGLSGTVPLIVDPVCASMHGDPLLHPSALNALKEK Mvan_0724|M.vanbaalenii_PYR-1 ASSEIIETIADTWVAQGLHGSVPLVVDPVCASMHGDPLLHPSALNALRDK MAB_4197|M.abscessus_ATCC_1997 ASAPIIEAISESWSN--LAPSVPLVVDPVCASMHGDPLLHPSALDALRTR Mb0430c|M.bovis_AF2122/97 ASSRIVATVAATWRR--LELSVPLVVDPVCASMHGDPLLAPSALDSLRGQ Rv0422c|M.tuberculosis_H37Rv ASSRIVATVAATWRR--LELSVPLVVDPVCASMHGDPLLAPSALDSLRGQ MAV_4732|M.avium_104 ASSPIIAEVAATWRR--LGLSVPLVVDPVCASMHGDPLLAADALDTLRGQ MLBr_00295|M.leprae_Br4923 ASSSIIAAVAETWLR--LELTTPLVVDPVCASMHGDPLLTGEAMDSLRDR MMAR_0734|M.marinum_M ASPRIIDAVAATWRQ--LEVAVPLVVDPVCASMHGDALLAASGLESLREQ MUL_3599|M.ulcerans_Agy99 ASPRIIDAVAATWRQ--LEVTVPLVVDPVCASMHGDALLAASGLESLREQ **. *: :: : : .**:***********.** ..::::: . TH_1214|M.thermoresistible__bu LFPIATLVTPNLDEVRLLVGVDVVDEASQREAAKALHALGPKWVLVKGGH MSMEG_0825|M.smegmatis_MC2_155 LFPIASLVTPNLDEVRLITGIEVVDEATQRDAAKALHALGPKWALVKGGH Mflv_0181|M.gilvum_PYR-GCK LFPLATLVTPNLDEVGLLTGIEVVDEDSQRDAARALHALGPSWALVKGGH Mvan_0724|M.vanbaalenii_PYR-1 LFPLATLVTPNLDEVRLLVDIDVVDEESQRAAARALHALGPQWALVKGGH MAB_4197|M.abscessus_ATCC_1997 LFPLATLVTPNLDEVRLLVDIDVVDEDSQKEAARKLHALGPQWALVKGGH Mb0430c|M.bovis_AF2122/97 LFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH Rv0422c|M.tuberculosis_H37Rv LFPLATLLTPNLDEARLLVDIEVVDAESQRAAAKALHALGPQWVLVKGGH MAV_4732|M.avium_104 LFPLATLVTPNLDEVRLLVDIDVTDAASQRDAAKALHALGPQWVLVKGGH MLBr_00295|M.leprae_Br4923 LFPLATVVTPNLDEVRLLVGIDVVDTESQRAAAMALHALGPQWALVKGGH MMAR_0734|M.marinum_M LFPLATLVTPNLDEVRLLVGIDVIDTQSQHAAARALHGLGPRWVLVKGGH MUL_3599|M.ulcerans_Agy99 LFPLATLVTPNLDEVRLLVGIDVIDTQSQHAAARALHGLGPRWVLVKGGH ***:*:::******. *:..::* * :*: ** **.*** *.****** TH_1214|M.thermoresistible__bu LRSAPHSPDLLFDGAEF----HRFDAPRVDTGHDHGAGDTLAAATAAALA MSMEG_0825|M.smegmatis_MC2_155 LRTSAQSPDLLYNGTDF----YEFGAERIDTGHDHGAGDTLAAAAACALA Mflv_0181|M.gilvum_PYR-GCK LRSSAQSPDLLFDGTDF----HRFDSTRIDTTHDHGAGDTLAAATASALA Mvan_0724|M.vanbaalenii_PYR-1 LRSSSHSPDLLFDGTDF----HAFDSTRIDTVHDHGAGDTLAAAIACALA MAB_4197|M.abscessus_ATCC_1997 LRSSDTSTDLLFDGTEF----HYFPVERVDTGHDHGAGDTLAASISCALA Mb0430c|M.bovis_AF2122/97 LRSSDGSCDLLYDGVSC----YQFDAQRLPTGDDHGGGDTLATAIAAALA Rv0422c|M.tuberculosis_H37Rv LRSSDGSCDLLYDGVSC----YQFDAQRLPTGDDHGGGDTLATAIAAALA MAV_4732|M.avium_104 LRSSQRSCDLLYDGDSC----YEFDAHRLNTGNDHGGGDTLASAVACALA MLBr_00295|M.leprae_Br4923 LRSSDRSCDLLYGGSSAGVAFHEFDAPRVQTGNDHGGGDTLAAAVSCALA MMAR_0734|M.marinum_M LRSSTRSCDLLYDGTDF----FEFDAPRVATGNDHGGGDTLAAATACALA MUL_3599|M.ulcerans_Agy99 LRSSTRSCDLLYDGTDF----FEFDAPRVATGNDHGGGDTLAAATACALA **:: * ***:.* . . * *: * .***.*****:: :.*** TH_1214|M.thermoresistible__bu HGHSVPEAVEFAKRWITECLRAAYPLGRGHGPVNPMFRLRG-- MSMEG_0825|M.smegmatis_MC2_155 HGMDMPDAVAFAKGWVTECLRAAYPLGHGHGPVSALFRLHHGS Mflv_0181|M.gilvum_PYR-GCK HGYSVPDAVAFAKRWVTECIRSAYPLGQGHGPVSALFRLAP-- Mvan_0724|M.vanbaalenii_PYR-1 HGYPVPDAVAFGKHWVTECLRAAYPLGHGHGPVSALFRLTT-- MAB_4197|M.abscessus_ATCC_1997 HGLPVTEAVAFGKQWITECLKAAYPLGHGHGPVSALFRLDA-- Mb0430c|M.bovis_AF2122/97 HGFTVPDAVDFGKRWVTECLRAAYPLGRGHGPVSPLFRLS--- Rv0422c|M.tuberculosis_H37Rv HGFTVPDAVDFGKRWVTECLRAAYPLGRGHGPVSPLFRLS--- MAV_4732|M.avium_104 HGFTVPDAVAFGKRWVTECLRASYPLGHGHGPVSALFRLSGDG MLBr_00295|M.leprae_Br4923 HGYTVPDAVGFGKRWVTECLRDAYPLGRGHGPVSPLFQRT--- MMAR_0734|M.marinum_M HGFTVPDAVSFAKKWVTECIRAAYPLGRGHGPVSPLFRLS--- MUL_3599|M.ulcerans_Agy99 HGFTVPDAVSFAKKWVTECIRAAYPLGRGHGPVSPLFRLS--- ** :.:** *.* *:***:: :****:*****..:*: