For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1171 | ureG | - | 100% (226) | Urease accessory protein ureG |
| M. thermoresistible (build 8) | TH_2818 | - | 9e-08 | 29.34% (167) | PUTATIVE nickel cation-binding GTPase, HypB |
| M. thermoresistible (build 8) | TH_0131 | - | 6e-07 | 30.13% (156) | LAO/AO transport system ATPase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1883 | ureG | 1e-102 | 88.57% (210) | urease accessory protein ureG |
| M. gilvum PYR-GCK | Mflv_3350 | - | 1e-111 | 89.19% (222) | urease accessory protein UreG |
| M. tuberculosis H37Rv | Rv1852 | ureG | 1e-102 | 88.57% (210) | urease accessory protein ureG |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2427 | - | 1e-106 | 85.00% (220) | urease accessory protein (UreG) |
| M. marinum M | MMAR_2726 | ureG | 1e-104 | 89.05% (210) | urease accessory protein UreG |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3623 | ureG | 1e-108 | 86.94% (222) | urease accessory protein UreG |
| M. ulcerans Agy99 | MUL_3027 | ureG | 1e-104 | 89.05% (210) | urease accessory protein UreG |
| M. vanbaalenii PYR-1 | Mvan_3080 | - | 1e-113 | 90.54% (222) | urease accessory protein UreG |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3350|M.gilvum_PYR-GCK MPPHFLDGQPHGHADRPRRVRRPDEPLRIGVGGPVGSGKTALVAALCRQL
Mvan_3080|M.vanbaalenii_PYR-1 MPPHFLDGQPHGHTDRPRRVRQPGEPLRIGVGGPVGSGKTALVAALCRQL
MSMEG_3623|M.smegmatis_MC2_155 MPPHFLDGEPHTHTDRPKRVRKPGEPLRIGVGGPVGSGKTALVAALCRQL
TH_1171|M.thermoresistible__bu MPPHFIDGSPHPERPRPRRVRRPDEPLRIGVGGPVGSGKTALVAALCRQL
MAB_2427|M.abscessus_ATCC_1997 MPPHLIDGQPHQHIDRPRRVRQPGEPLRIGIGGPVGSGKTALVAALCRTL
Mb1883|M.bovis_AF2122/97 MATHSHP-HSHTVPARPRRVRKPGEPLRIGVGGPVGSGKTALVAALCRQL
Rv1852|M.tuberculosis_H37Rv MATHSHP-HSHTVPARPRRVRKPGEPLRIGVGGPVGSGKTALVAALCRQL
MMAR_2726|M.marinum_M MAKHSHD-HTHDHHDRPRRVRKPGEPLRIGVGGPVGSGKTALVAAICRQL
MUL_3027|M.ulcerans_Agy99 MAKHSHD-HTHDHHDRPRRVRKPGEPLRIGVGGPVGSGKTALVAAICRQL
*. * .* **:***:*.******:**************:** *
Mflv_3350|M.gilvum_PYR-GCK REDLSLAVLTNDIYTTEDADFLRRNAVLPDDRITAVQTGGCPHTAIRDDI
Mvan_3080|M.vanbaalenii_PYR-1 RDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDI
MSMEG_3623|M.smegmatis_MC2_155 RDELSLAVLTNDIYTTEDADFLRRNAVLPDERIAAVQTGGCPHTAIRDDI
TH_1171|M.thermoresistible__bu RDELSLAVLTNDIYTTEDADFLRRHAVLPDDRIAAVQTGGCPHTAIRDDI
MAB_2427|M.abscessus_ATCC_1997 RDEISVAVLTNDIYTTEDADFLRRHAVLPDERITAVQTGGCPHTAIRDDI
Mb1883|M.bovis_AF2122/97 RGELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDI
Rv1852|M.tuberculosis_H37Rv RGELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDI
MMAR_2726|M.marinum_M RDELSLAVLTNDIYTTEDADFLRKHAVLPDSRITAVQTGGCPHTAIRDDI
MUL_3027|M.ulcerans_Agy99 RDELSLAVLTNDIYTTEDADFLRKHAVLPDSRIIAVQTGGCPHTAIRDDI
* ::*:***************** :*****.** ****************
Mflv_3350|M.gilvum_PYR-GCK TANLDAIDDLIAGHDDLDLILVESGGDNLTATFSSGLVDVQIFVIDVAGG
Mvan_3080|M.vanbaalenii_PYR-1 TANLDAIDDLIAGHDDLDLILVESGGDNLTATFSSGLVDVQIFVIDVAGG
MSMEG_3623|M.smegmatis_MC2_155 TANLDAIDDLIEMNPALDLILVESGGDNLTATFSSGLVDVQIFVVDVAGG
TH_1171|M.thermoresistible__bu TANLDAIDDLMAAHDGLDLILVESGGDNLTATFSSGLVDAQIFVIDVAGG
MAB_2427|M.abscessus_ATCC_1997 TANLDAIEDLIATNEPLDLILVESGGDNLTATFSSGLIDVQIFVIDVAGG
Mb1883|M.bovis_AF2122/97 TANLDAIDELMAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGG
Rv1852|M.tuberculosis_H37Rv TANLDAIDELMAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGG
MMAR_2726|M.marinum_M TANLDAIDDLIAAHDALDLILVESGGDNLTATFSSGLVDVQIFVIDVAGG
MUL_3027|M.ulcerans_Agy99 TANLDAIDDLIAAHDALDLILVESGGDNLTATFSSGLVDVQIFVIDVAGG
*******::*: : *********************:*.****:*****
Mflv_3350|M.gilvum_PYR-GCK DKVPRKGGPGVTFSDLLVINKTDLAPLVGADLDVMRRDAAAVRGERPFEL
Mvan_3080|M.vanbaalenii_PYR-1 DKVPRKGGPGVTFSDLLVVNKTDLAPLVGADLEVMRRDAAAVRGDRPFEL
MSMEG_3623|M.smegmatis_MC2_155 DKVPRKGGPGVTFSDLLVVNKTDLAPLVGADLDVMRRDAAKVRAERPTAL
TH_1171|M.thermoresistible__bu DKVPRKGGPGVTFSDLLVVNKTDLAPLVGADLEVMRRDAAAVRGGRPTAL
MAB_2427|M.abscessus_ATCC_1997 DKVPRKGGPGVTFSDLLVINKTDLAPMVGADLTVMARDAAAVREGRPTAM
Mb1883|M.bovis_AF2122/97 DKVPRKGGPGVTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVL
Rv1852|M.tuberculosis_H37Rv DKVPRKGGPGVTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVL
MMAR_2726|M.marinum_M DKVPRKGGPGVTFSDLLVVNKTDLAPLVGADLKVMARDAEAVRDGRPTVL
MUL_3027|M.ulcerans_Agy99 DKVPRKGGPGVTFSDLLVVNKTDLAPLVGADLKVMARDAEAVRDGRPTVL
************:*****:******.:***** ** *** ** ** :
Mflv_3350|M.gilvum_PYR-GCK ISLTGDPAATPVLGWVREQLRVAQAV----
Mvan_3080|M.vanbaalenii_PYR-1 ISLAVDPAATPVLSWVREQLRVAQAV----
MSMEG_3623|M.smegmatis_MC2_155 ISLTEDPTAGPVLDWVREQLRVAAAQTV--
TH_1171|M.thermoresistible__bu ISLTEDPAATPVLTWVRGRLRLPVG-----
MAB_2427|M.abscessus_ATCC_1997 ISLTEDPAASEVLAWVRAHLTEAHQTDHAH
Mb1883|M.bovis_AF2122/97 QSLTEDPAASDVVAWVRSQLAADGV-----
Rv1852|M.tuberculosis_H37Rv QSLTEDPAASDVVAWVRSQLAADGV-----
MMAR_2726|M.marinum_M QSLTEDPAATKVLDWVRSQLAAAG------
MUL_3027|M.ulcerans_Agy99 QSLTEDPAATKVLDWVRSQLAAAG------
**: **:* *: *** :*