For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1132 | - | 100% (206) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3218 | - | 1e-71 | 63.33% (210) | hypothetical protein Mb3218 |
| M. gilvum PYR-GCK | Mflv_4657 | - | 3e-64 | 60.10% (203) | hypothetical protein Mflv_4657 |
| M. tuberculosis H37Rv | Rv3196 | - | 1e-71 | 63.33% (210) | hypothetical protein Rv3196 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3502 | - | 1e-53 | 53.85% (208) | hypothetical protein MAB_3502 |
| M. marinum M | MMAR_1368 | - | 4e-68 | 63.90% (205) | hypothetical protein MMAR_1368 |
| M. avium 104 | MAV_4140 | - | 8e-71 | 63.29% (207) | hypothetical protein MAV_4140 |
| M. smegmatis MC2 155 | MSMEG_1955 | - | 3e-73 | 66.67% (207) | hypothetical protein MSMEG_1955 |
| M. ulcerans Agy99 | MUL_2508 | - | 3e-67 | 62.93% (205) | hypothetical protein MUL_2508 |
| M. vanbaalenii PYR-1 | Mvan_1811 | - | 3e-66 | 62.87% (202) | hypothetical protein Mvan_1811 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_1132|M.thermoresistible__bu --------------------------------------------------
MSMEG_1955|M.smegmatis_MC2_155 ---------------MTARFTLTPDRPVLLRPDGAVQIGWDPRTAVRVRP
Mb3218|M.bovis_AF2122/97 MSARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRP
Rv3196|M.tuberculosis_H37Rv MSARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRP
MMAR_1368|M.marinum_M ---------------MPALYSLDPAMPVLLRPDGAVQVGWDPQRAVLIRP
MUL_2508|M.ulcerans_Agy99 ---------------MPALYSLDPAMPVLLRPDGAVQVGWDPQRAVLIRP
MAV_4140|M.avium_104 MPAATVS-------TPATTYALDPAMPVLLRPDGAVQVGWDPRRAVLVRP
Mflv_4657|M.gilvum_PYR-GCK ----------MTRCRTMTRYALSPATPVLSRPDGTVQVGWDPRKAVVVRP
Mvan_1811|M.vanbaalenii_PYR-1 ----------------MTRYAVSSATPVLSRPDGTVQVGWDPRRAVVVHP
MAB_3502|M.abscessus_ATCC_1997 --------MPQWVMSSEPTFTLDPARPVLPRPDDGIQIGWTPRHAVVVHT
TH_1132|M.thermoresistible__bu ---------------------------------------LHDLLAALLRA
MSMEG_1955|M.smegmatis_MC2_155 PDGMTPTQLTDLLHALQTGRSIEQLRSATEQFG--DPALVGDVLAALDSA
Mb3218|M.bovis_AF2122/97 PRGLTATGLAALLRSMRSPIPITELQRQAAERGLVDGDAMANLVAQLVGA
Rv3196|M.tuberculosis_H37Rv PRGLTATGLAALLRSMRSPIPITELQRQAAERGLVDGDAMANLVAQLVGA
MMAR_1368|M.marinum_M PEGLTTTAVAELLRSMRSPIPITELQRHATGRGWVPGD-VANLVSQLVDA
MUL_2508|M.ulcerans_Agy99 PEGLTTTAVAELLRSMRSPIPITELQRHATGRGWVPGD-VANLVSQLVGA
MAV_4140|M.avium_104 PRGLAAAELARLLRSMCSPTPLSELQRRALEHGLTDADGLRNLVTQLVGA
Mflv_4657|M.gilvum_PYR-GCK PAGLPGSVLAELLRALQGVATAPQLQRLAAGHG-VDAPVVDGLVAHLVTR
Mvan_1811|M.vanbaalenii_PYR-1 PAGLPAAVLAELLRALQGAATAPELQKVAAGHG-VAATVVAGLLSHLVDA
MAB_3502|M.abscessus_ATCC_1997 GSAAPTHAVRQLLSSLSDELSWEQIVNLRCAKDFRDPDDIRSLLEELVAA
: .:: *
TH_1132|M.thermoresistible__bu GLVRRTGR-----RPGRAASIRIHGRGPLSDLLAGSLRCTGNRVQHSTRS
MSMEG_1955|M.smegmatis_MC2_155 GVLVRRSA-----SPARTATIRIHGRGPLSELLAGSLRRSGARLQHTAES
Mb3218|M.bovis_AF2122/97 GVATPLANPGNLDSRRRAASIRVHGRGPLSDLLVQALRCSGARIRHSSQP
Rv3196|M.tuberculosis_H37Rv GVATPLANPGNLDSRRRAASIRVHGRGPLSDLLVQALRCSGARIRHSSQP
MMAR_1368|M.marinum_M GVATRRHR----DRTGRTASIRIHGRGPLSDLLVQALRCSGARIGQSSQP
MUL_2508|M.ulcerans_Agy99 GVATRRHR----HRTGRTASIRIHGRGPLSDLLVQALRCSGARIGQSSQP
MAV_4140|M.avium_104 GVASECGR-----SGGRAPSVRIHGRGPLSELLVESLRCSGARIAHSSQP
Mflv_4657|M.gilvum_PYR-GCK GVVTEAPR-----TPVRSVAVRVHGDGPLADLLISSLRHANVRVSHSTRP
Mvan_1811|M.vanbaalenii_PYR-1 GVVVPTPP-----GVDRSPAVRVHGSGPLTDLLTASLRCSNVRISQSTRT
MAB_3502|M.abscessus_ATCC_1997 GAVIRRIR----PTNPASPVIRLVGRGPLSDALAEALRHTSARIQHTTHS
* : :*: * ***:: * :** :. *: :::..
TH_1132|M.thermoresistible__bu HAA-APAGTDLVVLADDLIAEPRVVRELHAAQIPHLPVRVRDHTGLIGPL
MSMEG_1955|M.smegmatis_MC2_155 YAT-PRPGTDLVVLADELVTEPRIVRELHRGRIAHLPVRVRDGTGLVGPL
Mb3218|M.bovis_AF2122/97 HAAVTPAGVDLVVLSDYLVADPHMVRDLHTERVPHLPVRVRDGTGMVGPL
Rv3196|M.tuberculosis_H37Rv HAAVTPAGVDLVVLSDYLVADPHMVRDLHTERVPHLPVRVRDGTGMVGPL
MMAR_1368|M.marinum_M HAAVTRSAVDLVVLSDNLVAEPRLVRDLQREGIAHLPVRVRDGTGLVGPL
MUL_2508|M.ulcerans_Agy99 HAAVTRSAVDLVVLSDNLVAEPRLVRDLRREGIAHLPVRVRDGTGLVGPL
MAV_4140|M.avium_104 HAAVSGDDVDLVVLSDYLVADPRLVRDLHEQGVAHLPVRVRDGVGLVGPL
Mflv_4657|M.gilvum_PYR-GCK NASSGRP--DLVVLTDYLVADPRLVRDLCDARVPHLPVRVRDGTGLVGPL
Mvan_1811|M.vanbaalenii_PYR-1 HASTAGA--DLVVLTDYLVADPRVVRELHDAGVAHLPVRVRDGTGLIGPL
MAB_3502|M.abscessus_ATCC_1997 VHGKSWQHVDLAVLADDLIADTRLLRMLADAEVPHLSVRARDGTGLIGPM
**.**:* *:::.:::* * :.**.**.** .*::**:
TH_1132|M.thermoresistible__bu VIPGVTSCLGCGDLHRTDRDAAWPVVAAQLRGTVGAADRATVLATAALAL
MSMEG_1955|M.smegmatis_MC2_155 VIPGVTSCLHCADLHRADRDAAWPALAAQLRGTVGSASRATILATAALAL
Mb3218|M.bovis_AF2122/97 VVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRATLLATAALAL
Rv3196|M.tuberculosis_H37Rv VVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRATLLATAALAL
MMAR_1368|M.marinum_M VIPGVTSCLRCADLHRSDRDPAWPAIAAQLRDTVGVADRATVLATAALAL
MUL_2508|M.ulcerans_Agy99 VIPGVTSCLRCADLHRSDRDPAWPAIAAQLRDTVGVADRATVLATAALAL
MAV_4140|M.avium_104 VIPGVTSCLSCADLHRRDRDAAWPVICAQLRDTVGVADRATVLATGALAL
Mflv_4657|M.gilvum_PYR-GCK VIPSVTSCLRCADLHRSDRDAAWPAIAAQLSRTVGNADRATVLATAALAL
Mvan_1811|M.vanbaalenii_PYR-1 VIPGVTSCLRCGDLHRSDRDPAWPAVAAQLCRTVGSADRPTILATAALAL
MAB_3502|M.abscessus_ATCC_1997 VLPGITSCLECADRHRHDRDEQWPAVAAQLTGTVGVAAPATVLGTVAVAL
*:*.:**** *.* ** *** **.:.*** *** * .*:*.* *:**
TH_1132|M.thermoresistible__bu EQVNRVVRAVLG----DDPAHSTPPPTLDTTLEFDVRVHSIVMRRWSRHP
MSMEG_1955|M.smegmatis_MC2_155 RQVDLVIRAVSGTAGPDDPPE--PPATLDTTLELTADGYSMSFRRWSRHP
Mb3218|M.bovis_AF2122/97 SQVNRVIAAVRGQ---EATPE--PPSALNTTLEFDLNAGSIVARQWTRHP
Rv3196|M.tuberculosis_H37Rv SQVNRVIAAVRGQ---EATPE--PPSALNTTLEFDLNAGSIVARQWTRHP
MMAR_1368|M.marinum_M RQVNGVIAAVRDQ---ENPSD--PPPALNATLEFDLQAGSVVARYWARHP
MUL_2508|M.ulcerans_Agy99 RQINGVIAAVRDQ---ENPSD--PPSALNATLEFDLQAGSVVARYWARHP
MAV_4140|M.avium_104 SQVNRVIAAVRGQ---PAASDPAPPQTLNATLEFDLQAGAIVARRWDRHP
Mflv_4657|M.gilvum_PYR-GCK NEIDHIVRSLRPD---HPGAVAASPETLDTTLEFDVAAGTVQARRWTRHP
Mvan_1811|M.vanbaalenii_PYR-1 REIEHVLRAVR-------GAGTDSPSTLDTTLEFEVATGTSTARRWSRHP
MAB_3502|M.abscessus_ATCC_1997 AQIDRVLSAMRGQ-----PPG--PLATLNATLELDLATHALTARHWTAHP
::: :: :: . . :*::***: : * * **
TH_1132|M.thermoresistible__bu ACSC-------
MSMEG_1955|M.smegmatis_MC2_155 DCQC-------
Mb3218|M.bovis_AF2122/97 RCFC-------
Rv3196|M.tuberculosis_H37Rv RCFC-------
MMAR_1368|M.marinum_M LCSC-------
MUL_2508|M.ulcerans_Agy99 LCSC-------
MAV_4140|M.avium_104 LCSC-------
Mflv_4657|M.gilvum_PYR-GCK DCSC-------
Mvan_1811|M.vanbaalenii_PYR-1 SCGC-------
MAB_3502|M.abscessus_ATCC_1997 LCPCGAYFAGN
* *