For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1010 | ribC | - | 100% (203) | PROBABLE RIBOFLAVIN SYNTHASE ALPHA CHAIN RIBC (RIBE) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1447 | ribC | 2e-75 | 70.73% (205) | riboflavin synthase subunit alpha |
M. gilvum PYR-GCK | Mflv_3721 | - | 3e-83 | 79.29% (198) | riboflavin synthase subunit alpha |
M. tuberculosis H37Rv | Rv1412 | ribC | 2e-75 | 70.73% (205) | riboflavin synthase subunit alpha |
M. leprae Br4923 | MLBr_00558 | ribC | 5e-71 | 68.81% (202) | riboflavin synthase subunit alpha |
M. abscessus ATCC 19977 | MAB_2797c | - | 7e-80 | 74.75% (198) | riboflavin synthase subunit alpha |
M. marinum M | MMAR_2221 | ribC | 4e-77 | 73.76% (202) | riboflavin synthase alpha chain RibC |
M. avium 104 | MAV_3366 | ribE | 1e-75 | 73.13% (201) | riboflavin synthase subunit alpha |
M. smegmatis MC2 155 | MSMEG_3071 | ribE | 4e-81 | 77.83% (203) | riboflavin synthase subunit alpha |
M. ulcerans Agy99 | MUL_1808 | ribC | 3e-77 | 73.76% (202) | riboflavin synthase subunit alpha |
M. vanbaalenii PYR-1 | Mvan_2693 | - | 2e-81 | 80.30% (198) | riboflavin synthase subunit alpha |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3721|M.gilvum_PYR-GCK MVFTGIVEELGEVVGVED----LGDSARLVIRGPIVTSDAGHGDSIAVNG Mvan_2693|M.vanbaalenii_PYR-1 -MFTGIVEELGEVVGKED----LGDSVRLVIRGPVVTSDAGHGDSIAVNG MAB_2797c|M.abscessus_ATCC_199 -MFTGIVEELGEILGRED----LGDSARLTVLGPLVVEDAKHGDSIAVNG TH_1010|M.thermoresistible__bu -VFTGIVEELGEIVEREDFVGPAGSSARLVIRGPVVTSDARHGDSIAVNG MSMEG_3071|M.smegmatis_MC2_155 -MFTGIVEELGVLVDKAE----LDDSARLTIRGPVVTADAGHGDSIAVNG Mb1447|M.bovis_AF2122/97 -MFTGIVEERGEVTGREA----LVDAARLTIRGPMVTADAGHGDSIAVNG Rv1412|M.tuberculosis_H37Rv -MFTGIVEERGEVTGREA----LVDAARLTIRGPMVTADAGHGDSIAVNG MMAR_2221|M.marinum_M -MFTGIVEELGEITDRST----LTDAARLTIRGPIVTADAGHGDSIAVNG MUL_1808|M.ulcerans_Agy99 -MFTGIVEELGEITDRST----LTDAARLTIRGPIVTADAGHGDSIAVNG MLBr_00558|M.leprae_Br4923 -MFTGIVEELGEVVGRDA----HADAARLIIRGRTVTADAGHGDSIAVNG MAV_3366|M.avium_104 -MFTGIVEELGEVTARDV----LADAARLTIRGAVVTADAGHGDSIAVNG :******* * : .:.** : * *. ** ********* Mflv_3721|M.gilvum_PYR-GCK VCLTVVDVLADGSFSADVMAETLNRSSLRGVDVGARVNLERAAAINSRLG Mvan_2693|M.vanbaalenii_PYR-1 VCLTVVDVLADGAFTADVMDETLNRSSLRGVDVGAKVNLERAAAVSSRLG MAB_2797c|M.abscessus_ATCC_199 VCLTVVDVREGGVFTTDVMGETLARSSLDKIEAGAKVNLERAAAVNSRLG TH_1010|M.thermoresistible__bu VCLTVVEV-ADGAFSTDVMGETLNRSSLAVLKPGSRVNLERAAAVNSRLG MSMEG_3071|M.smegmatis_MC2_155 VCLTVVDVLPDGAFTADVMGETLNRSSLAGVAVGDRVNLERAAAVNSRLG Mb1447|M.bovis_AF2122/97 VCLTVVDVLPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLG Rv1412|M.tuberculosis_H37Rv VCLTVVDVLPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLG MMAR_2221|M.marinum_M VCLTVVEVLADGQFTADVMAETLNRSNLGELQVGSQVNLERAAAVNSRLG MUL_1808|M.ulcerans_Agy99 VCLTVVEVLADGQFTADVMAETLNRSNLGELQVGSQVNLERAAAVNSRLG MLBr_00558|M.leprae_Br4923 VCLTVVEVLPDGQFSADVMAETLHRSNLGELRVGNRVNLERAVAINSRLG MAV_3366|M.avium_104 VCLTVAELLPDGRFSADVMGETLNRSNLGALQVGSRVNLERAAAVNSRLG *****.:: .* *::*** *** **.* : * :******.*:.**** Mflv_3721|M.gilvum_PYR-GCK GHIVQGHVDGTGHIVSRTPSEHWTVVRIALPETLARYVVQKGSITVDGVS Mvan_2693|M.vanbaalenii_PYR-1 GHIVQGHVDGTGHVISRTPSEHWTVVRIALPAALARYVVQKGSITVDGVS MAB_2797c|M.abscessus_ATCC_199 GHIVQGHVDGTGNVLSRSPSENWEVVRVSLPSAVARYVVEKGSITVDGVS TH_1010|M.thermoresistible__bu GHIVQGHVDGTGNVISRTPAQGWEVVRIALPAELSRYVVHKGSITVDGVS MSMEG_3071|M.smegmatis_MC2_155 GHIVQGHVDGTGSVISRTPHEHWEVVRIALPPALSRYVVEKGSITVDGVS Mb1447|M.bovis_AF2122/97 GHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGIS Rv1412|M.tuberculosis_H37Rv GHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGIS MMAR_2221|M.marinum_M GHIVQGHVDGTGEIIARSPSEHWEVVRIQVPATVARYVVEKGSITVDGIS MUL_1808|M.ulcerans_Agy99 GHIVQGHVDGTGEIIARSPSEHWEVVRIQVPATVARYVVEKGSITVDGIS MLBr_00558|M.leprae_Br4923 GHIVQGHVDGTGEVVARTLSDHWEVVRIEVPPAVARYFVEKGSITVDGIS MAV_3366|M.avium_104 GHIVQGHVDGTGRIVARTPSEHWEVVRIEVPPEVARYVVEKGSITVDGIS *********.** :::* : * ***: :* ::**.*.********:* Mflv_3721|M.gilvum_PYR-GCK LTVSGLG---PDWFEVSLIPTTLDMTTLGRAAVGAPVNLEVDVIAKYVER Mvan_2693|M.vanbaalenii_PYR-1 LTVSGLG---HDWFEVSLIPTTLGLTTLGHAEVGAHVNLEVDVIAKYVER MAB_2797c|M.abscessus_ATCC_199 LTVSGLG---PDWFEVSLIPTTLDLTTLGAAAVGTTVNLEVDVIAKYVER TH_1010|M.thermoresistible__bu LTVSDLG---PDWFEVSLIPTTLELTTLGTVEVGAPVNLEVDVIAKYVER MSMEG_3071|M.smegmatis_MC2_155 LTVSAIG---DDWFEISLIPTTRELTTLGTAPVGTTVNLEVDVIAKYVER Mb1447|M.bovis_AF2122/97 LTVSGLGAEQRDWFEVSLIPTTRELTTLGSAAVGTRVNLEVDVVAKYVER Rv1412|M.tuberculosis_H37Rv LTVSGLGAEQRDWFEVSLIPTTRELTTLGSAAVGTRVNLEVDVVAKYVER MMAR_2221|M.marinum_M LTVSDLGAQPRDWFEVSLIPTTRELTTLGQAPVGTQVNLEVDVIAKYVER MUL_1808|M.ulcerans_Agy99 LTVSDLGAQPRDWFEVSLIPTTRELTTLGQAPVGTQVNLEVDVIAKYVER MLBr_00558|M.leprae_Br4923 LTVSGLGAEPRDWLEVSLIPTTRELTTLGRTPLGTQVNLEVDVIAKYVER MAV_3366|M.avium_104 LTVSGLGGEPRDWFEVSLIPTTRELTTLGGAPVGTQVNLEVDVIAKYVER **** :* **:*:****** :**** . :*: *******:****** Mflv_3721|M.gilvum_PYR-GCK LLGQRD-PSGG-- Mvan_2693|M.vanbaalenii_PYR-1 LLEKKDAPTGGTD MAB_2797c|M.abscessus_ATCC_199 LLEHR-------- TH_1010|M.thermoresistible__bu LMRPDGR------ MSMEG_3071|M.smegmatis_MC2_155 LMSGTGR------ Mb1447|M.bovis_AF2122/97 LMRSAG------- Rv1412|M.tuberculosis_H37Rv LMRSAG------- MMAR_2221|M.marinum_M LMQSGPTADPAH- MUL_1808|M.ulcerans_Agy99 LMQSGPTADPAH- MLBr_00558|M.leprae_Br4923 LLQSVPTGDLTR- MAV_3366|M.avium_104 LMSR--------- *: