For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
FTGIVEELGEVTARDVLADAARLTIRGAVVTADAGHGDSIAVNGVCLTVAELLPDGRFSADVMGETLNRS NLGALQVGSRVNLERAAAVNSRLGGHIVQGHVDGTGRIVARTPSEHWEVVRIEVPPEVARYVVEKGSITV DGISLTVSGLGGEPRDWFEVSLIPTTRELTTLGGAPVGTQVNLEVDVIAKYVERLMSR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_3366 | ribE | - | 100% (199) | riboflavin synthase subunit alpha |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1447 | ribC | 5e-92 | 84.77% (197) | riboflavin synthase subunit alpha |
| M. gilvum PYR-GCK | Mflv_3721 | - | 4e-81 | 75.38% (199) | riboflavin synthase subunit alpha |
| M. tuberculosis H37Rv | Rv1412 | ribC | 5e-92 | 84.77% (197) | riboflavin synthase subunit alpha |
| M. leprae Br4923 | MLBr_00558 | ribC | 2e-93 | 85.28% (197) | riboflavin synthase subunit alpha |
| M. abscessus ATCC 19977 | MAB_2797c | - | 2e-77 | 72.59% (197) | riboflavin synthase subunit alpha |
| M. marinum M | MMAR_2221 | ribC | 4e-95 | 87.31% (197) | riboflavin synthase alpha chain RibC |
| M. smegmatis MC2 155 | MSMEG_3071 | ribE | 2e-85 | 78.79% (198) | riboflavin synthase subunit alpha |
| M. thermoresistible (build 8) | TH_1010 | ribC | 1e-75 | 73.13% (201) | PROBABLE RIBOFLAVIN SYNTHASE ALPHA CHAIN RIBC (RIBE) |
| M. ulcerans Agy99 | MUL_1808 | ribC | 3e-95 | 87.31% (197) | riboflavin synthase subunit alpha |
| M. vanbaalenii PYR-1 | Mvan_2693 | - | 5e-80 | 73.87% (199) | riboflavin synthase subunit alpha |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3721|M.gilvum_PYR-GCK MVFTGIVEELGEVVGVED----LGDSARLVIRGPIVTSDAGHGDSIAVNG
Mvan_2693|M.vanbaalenii_PYR-1 -MFTGIVEELGEVVGKED----LGDSVRLVIRGPVVTSDAGHGDSIAVNG
MAB_2797c|M.abscessus_ATCC_199 -MFTGIVEELGEILGRED----LGDSARLTVLGPLVVEDAKHGDSIAVNG
TH_1010|M.thermoresistible__bu -VFTGIVEELGEIVEREDFVGPAGSSARLVIRGPVVTSDARHGDSIAVNG
MSMEG_3071|M.smegmatis_MC2_155 -MFTGIVEELGVLVDKAE----LDDSARLTIRGPVVTADAGHGDSIAVNG
MAV_3366|M.avium_104 -MFTGIVEELGEVTARDV----LADAARLTIRGAVVTADAGHGDSIAVNG
MLBr_00558|M.leprae_Br4923 -MFTGIVEELGEVVGRDA----HADAARLIIRGRTVTADAGHGDSIAVNG
Mb1447|M.bovis_AF2122/97 -MFTGIVEERGEVTGREA----LVDAARLTIRGPMVTADAGHGDSIAVNG
Rv1412|M.tuberculosis_H37Rv -MFTGIVEERGEVTGREA----LVDAARLTIRGPMVTADAGHGDSIAVNG
MMAR_2221|M.marinum_M -MFTGIVEELGEITDRST----LTDAARLTIRGPIVTADAGHGDSIAVNG
MUL_1808|M.ulcerans_Agy99 -MFTGIVEELGEITDRST----LTDAARLTIRGPIVTADAGHGDSIAVNG
:******* * : .:.** : * *. ** *********
Mflv_3721|M.gilvum_PYR-GCK VCLTVVDVLADGSFSADVMAETLNRSSLRGVDVGARVNLERAAAINSRLG
Mvan_2693|M.vanbaalenii_PYR-1 VCLTVVDVLADGAFTADVMDETLNRSSLRGVDVGAKVNLERAAAVSSRLG
MAB_2797c|M.abscessus_ATCC_199 VCLTVVDVREGGVFTTDVMGETLARSSLDKIEAGAKVNLERAAAVNSRLG
TH_1010|M.thermoresistible__bu VCLTVVEV-ADGAFSTDVMGETLNRSSLAVLKPGSRVNLERAAAVNSRLG
MSMEG_3071|M.smegmatis_MC2_155 VCLTVVDVLPDGAFTADVMGETLNRSSLAGVAVGDRVNLERAAAVNSRLG
MAV_3366|M.avium_104 VCLTVAELLPDGRFSADVMGETLNRSNLGALQVGSRVNLERAAAVNSRLG
MLBr_00558|M.leprae_Br4923 VCLTVVEVLPDGQFSADVMAETLHRSNLGELRVGNRVNLERAVAINSRLG
Mb1447|M.bovis_AF2122/97 VCLTVVDVLPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLG
Rv1412|M.tuberculosis_H37Rv VCLTVVDVLPDGQFTADVMAETLNRSNLGELRPGSRVNLERAAALGSRLG
MMAR_2221|M.marinum_M VCLTVVEVLADGQFTADVMAETLNRSNLGELQVGSQVNLERAAAVNSRLG
MUL_1808|M.ulcerans_Agy99 VCLTVVEVLADGQFTADVMAETLNRSNLGELQVGSQVNLERAAAVNSRLG
*****.:: .* *::*** *** **.* : * :******.*:.****
Mflv_3721|M.gilvum_PYR-GCK GHIVQGHVDGTGHIVSRTPSEHWTVVRIALPETLARYVVQKGSITVDGVS
Mvan_2693|M.vanbaalenii_PYR-1 GHIVQGHVDGTGHVISRTPSEHWTVVRIALPAALARYVVQKGSITVDGVS
MAB_2797c|M.abscessus_ATCC_199 GHIVQGHVDGTGNVLSRSPSENWEVVRVSLPSAVARYVVEKGSITVDGVS
TH_1010|M.thermoresistible__bu GHIVQGHVDGTGNVISRTPAQGWEVVRIALPAELSRYVVHKGSITVDGVS
MSMEG_3071|M.smegmatis_MC2_155 GHIVQGHVDGTGSVISRTPHEHWEVVRIALPPALSRYVVEKGSITVDGVS
MAV_3366|M.avium_104 GHIVQGHVDGTGRIVARTPSEHWEVVRIEVPPEVARYVVEKGSITVDGIS
MLBr_00558|M.leprae_Br4923 GHIVQGHVDGTGEVVARTLSDHWEVVRIEVPPAVARYFVEKGSITVDGIS
Mb1447|M.bovis_AF2122/97 GHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGIS
Rv1412|M.tuberculosis_H37Rv GHIVQGHVDATGEIVARCPSEHWEVVRIEMPASVARYVVEKGSITVDGIS
MMAR_2221|M.marinum_M GHIVQGHVDGTGEIIARSPSEHWEVVRIQVPATVARYVVEKGSITVDGIS
MUL_1808|M.ulcerans_Agy99 GHIVQGHVDGTGEIIARSPSEHWEVVRIQVPATVARYVVEKGSITVDGIS
*********.** :::* : * ***: :* ::**.*.********:*
Mflv_3721|M.gilvum_PYR-GCK LTVSGLG---PDWFEVSLIPTTLDMTTLGRAAVGAPVNLEVDVIAKYVER
Mvan_2693|M.vanbaalenii_PYR-1 LTVSGLG---HDWFEVSLIPTTLGLTTLGHAEVGAHVNLEVDVIAKYVER
MAB_2797c|M.abscessus_ATCC_199 LTVSGLG---PDWFEVSLIPTTLDLTTLGAAAVGTTVNLEVDVIAKYVER
TH_1010|M.thermoresistible__bu LTVSDLG---PDWFEVSLIPTTLELTTLGTVEVGAPVNLEVDVIAKYVER
MSMEG_3071|M.smegmatis_MC2_155 LTVSAIG---DDWFEISLIPTTRELTTLGTAPVGTTVNLEVDVIAKYVER
MAV_3366|M.avium_104 LTVSGLGGEPRDWFEVSLIPTTRELTTLGGAPVGTQVNLEVDVIAKYVER
MLBr_00558|M.leprae_Br4923 LTVSGLGAEPRDWLEVSLIPTTRELTTLGRTPLGTQVNLEVDVIAKYVER
Mb1447|M.bovis_AF2122/97 LTVSGLGAEQRDWFEVSLIPTTRELTTLGSAAVGTRVNLEVDVVAKYVER
Rv1412|M.tuberculosis_H37Rv LTVSGLGAEQRDWFEVSLIPTTRELTTLGSAAVGTRVNLEVDVVAKYVER
MMAR_2221|M.marinum_M LTVSDLGAQPRDWFEVSLIPTTRELTTLGQAPVGTQVNLEVDVIAKYVER
MUL_1808|M.ulcerans_Agy99 LTVSDLGAQPRDWFEVSLIPTTRELTTLGQAPVGTQVNLEVDVIAKYVER
**** :* **:*:****** :**** . :*: *******:******
Mflv_3721|M.gilvum_PYR-GCK LLGQRD-PSGG--
Mvan_2693|M.vanbaalenii_PYR-1 LLEKKDAPTGGTD
MAB_2797c|M.abscessus_ATCC_199 LLEHR--------
TH_1010|M.thermoresistible__bu LMRPDGR------
MSMEG_3071|M.smegmatis_MC2_155 LMSGTGR------
MAV_3366|M.avium_104 LMSR---------
MLBr_00558|M.leprae_Br4923 LLQSVPTGDLTR-
Mb1447|M.bovis_AF2122/97 LMRSAG-------
Rv1412|M.tuberculosis_H37Rv LMRSAG-------
MMAR_2221|M.marinum_M LMQSGPTADPAH-
MUL_1808|M.ulcerans_Agy99 LMQSGPTADPAH-
*: