For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0887 | - | 100% (173) | PROBABLE CONSERVED TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3306c | - | 5e-72 | 69.77% (172) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_4749 | - | 4e-77 | 75.58% (172) | membrane-flanked domain-containing protein |
M. tuberculosis H37Rv | Rv3278c | - | 2e-72 | 70.35% (172) | transmembrane protein |
M. leprae Br4923 | MLBr_00733 | - | 3e-70 | 67.65% (170) | hypothetical protein MLBr_00733 |
M. abscessus ATCC 19977 | MAB_3625c | - | 4e-78 | 75.58% (172) | hypothetical protein MAB_3625c |
M. marinum M | MMAR_1258 | - | 3e-71 | 69.19% (172) | hypothetical protein MMAR_1258 |
M. avium 104 | MAV_4246 | - | 9e-72 | 68.60% (172) | hypothetical protein MAV_4246 |
M. smegmatis MC2 155 | MSMEG_1818 | - | 9e-80 | 80.23% (172) | membrane flanked domain-containing protein |
M. ulcerans Agy99 | MUL_2630 | - | 2e-71 | 69.19% (172) | hypothetical protein MUL_2630 |
M. vanbaalenii PYR-1 | Mvan_1707 | - | 3e-77 | 73.84% (172) | membrane-flanked domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment TH_0887|M.thermoresistible__bu ---------VGYPDNVLASDEQVVLHRHPHWKALVAPVLTLLVASAVAAF MSMEG_1818|M.smegmatis_MC2_155 ---------MGYPDNVLAGDEQVVLHRHPHWKRLIGPVFILIVATALASF Mflv_4749|M.gilvum_PYR-GCK MLNPQYSAAVGYPENVLAKDEHVVLHRHPHWGRLVLPAVFLIIASAAAAF Mvan_1707|M.vanbaalenii_PYR-1 ---------MGYPENVLATDEHVVLHRHPHWGRLTIPALILIIASAAAAF MAB_3625c|M.abscessus_ATCC_199 ---------MGYPENVLADDEQVVLHRHPHWKRLIGPALVLILSTGIAAF Mb3306c|M.bovis_AF2122/97 ---------MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAF Rv3278c|M.tuberculosis_H37Rv ---------MSYPENVLAAGEQVVLHRHPHWNRLIWPVVVLVLLTGLAAF MMAR_1258|M.marinum_M ---------MGYPDNAMAAGEQVVLHRHPHWTRLVWPVVVLILITGLAAL MUL_2630|M.ulcerans_Agy99 ---------MGYPDNAMAAGEQVVLHRHPHWARLVWPVVVLILITGLAAL MLBr_00733|M.leprae_Br4923 ---------MRYPGNTLVAGEQVVLHRHPHWKRLIWPAVVLILATGLVSF MAV_4246|M.avium_104 ---------MGYPDNVLAAGEHVIVHRHPHWKRLIGPVLVLILGTGLAAF : ** *.:. .*:*::****** * *.. *:: :. .:: TH_0887|M.thermoresistible__bu AAGWVNTTDWDGTAKNVLYIVIGAIWLVVIGWLTLWPFLNWLTTHFVITD MSMEG_1818|M.smegmatis_MC2_155 GAAYVNTLHWDPTATLVVSLVILAIWLVIVGWLTLWPFLTWLTTHFVITD Mflv_4749|M.gilvum_PYR-GCK IAGYVNTLNWEQAAKTIVFGVIAAIWLVLVGWLAVWPFLNWWTTHFVITD Mvan_1707|M.vanbaalenii_PYR-1 LAGYVNTLNWEQNAKTIVFAVIAAVWLILVGWLSIWPFLNWWTTHFVITD MAB_3625c|M.abscessus_ATCC_199 VAAMVDNTDWQSTAKNVVMIAIGVVWLVLVGWLSLWPFLNWLTTHFVITD Mb3306c|M.bovis_AF2122/97 GSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFLSWLTTHFVVTN Rv3278c|M.tuberculosis_H37Rv GSGFVNSTPWQQIAKNVIHAVIWGIWLVIVGWLTLWPFLSWLTTHFVVTN MMAR_1258|M.marinum_M GSGFVNSTQWQQLAKNIIHGVIWGIWLVIVGWLTLWPFLSWLTTHFVVTN MUL_2630|M.ulcerans_Agy99 GSGFVNSTQWQQLAKNIIHGVIWGIWLVIVGWLTLWPFLSWLTTHFVVTN MLBr_00733|M.leprae_Br4923 GSGYVNSTHWAQVAKNVIYGVLWGVWLVIVGWLTLWPFLNWLTTHFVVTN MAV_4246|M.avium_104 GSGYLDSTHFEQLAKNIIHGVIWGIWLVIVGWLTLWPFFGWLTTHFVVTN :. ::. : *. :: .: :**:::***::***: * *****:*: TH_0887|M.thermoresistible__bu RRVMFRYGVLTRAGIDIPLARINSVEFRHNLMDRILRTGTLIIESAAQDP MSMEG_1818|M.smegmatis_MC2_155 RRVMFRHGLLTRSGIDIPLARINSVEFRHGLSDRILRTGTLIIESASQDP Mflv_4749|M.gilvum_PYR-GCK RRVMYRHGLITRSGIDIPLARINSVEFRHGLVDRIFRTGTLIIESAAQDP Mvan_1707|M.vanbaalenii_PYR-1 RRVMYRHGLLTRSGIDIPLARINSVEFRHGLVDRMFRTGTLIIESASQDP MAB_3625c|M.abscessus_ATCC_199 RRVMFRHGLLSRSGIDIPLARINSVEFRHGLVDRILRTGTLIIESASQDP Mb3306c|M.bovis_AF2122/97 RRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDP Rv3278c|M.tuberculosis_H37Rv RRVMFRHGVLTRSGIDIPLARINSVEFRDRIFERIFRTGTLIIESASQDP MMAR_1258|M.marinum_M RRVMYRQGVLTRSGIDIPLARINSVEFRDRIFERMLRTGTLIIESASQDP MUL_2630|M.ulcerans_Agy99 RRVMYRQGVLTRSGIDIPLARINSVEFRDRIFERMLRTGTLIIESASQDP MLBr_00733|M.leprae_Br4923 RRVMFRQGTLTRSGVDIPLARINSVEFRDRLFERMFRTGTLIIESASQDP MAV_4246|M.avium_104 RRVMFRHGVATRTGIDIPLARINSVEFRDRITERMLRTGTLIIESASQDP ****:* * :*:*:*************. : :*::**********:*** TH_0887|M.thermoresistible__bu LSFEDIPRVEQVHALLYHEVFDTLGSEESPS------------- MSMEG_1818|M.smegmatis_MC2_155 LEFYDIPRVEQVHALLYHEVFDTLGSDESPS------------- Mflv_4749|M.gilvum_PYR-GCK LEFQDIPRVEYVHSLLYHEVFDTLGSEESPS------------- Mvan_1707|M.vanbaalenii_PYR-1 LEFQDIPRVEHVHSLLYHEVFDTLGSEESPS------------- MAB_3625c|M.abscessus_ATCC_199 LEFHEIPRVEYVHSLLYHEVFDTLGSEEGDSRSTGRGRERPPAT Mb3306c|M.bovis_AF2122/97 LEFYNIPRLREVHALLYHKVFDTLGSDESPS------------- Rv3278c|M.tuberculosis_H37Rv LEFYNIPRLREVHALLYHEVFDTLGSDESPS------------- MMAR_1258|M.marinum_M LEFYNIPRLREVHALLYHEVFDTLGSEEAPS------------- MUL_2630|M.ulcerans_Agy99 LEFYNIPRLREVHALLYHEVFDTLGSEEAPS------------- MLBr_00733|M.leprae_Br4923 VEFYNIPRLRQMYALLYHEVFDTLGSEESPS------------- MAV_4246|M.avium_104 LEFHDIPRLREVHALLYHEVFDTLGSEESPS------------- :.* :***:. :::****:*******:*. *