For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0555 | - | 100% (167) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_0012 | - | 2e-39 | 48.98% (147) | CONSERVED HYPOTHETICAL PROTEIN |
M. thermoresistible (build 8) | TH_0017 | - | 4e-39 | 47.62% (147) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0135 | - | 6e-45 | 54.42% (147) | hypothetical protein Mb0135 |
M. gilvum PYR-GCK | Mflv_4374 | - | 1e-35 | 45.21% (146) | dehydratase |
M. tuberculosis H37Rv | Rv0130 | - | 6e-45 | 54.42% (147) | hypothetical protein Rv0130 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1506c | - | 5e-34 | 46.32% (136) | hypothetical protein MAB_1506c |
M. marinum M | MMAR_0330 | - | 5e-45 | 54.42% (147) | acyl dehydratase |
M. avium 104 | MAV_5174 | - | 5e-46 | 56.64% (143) | ZbpA protein |
M. smegmatis MC2 155 | MSMEG_2201 | - | 3e-38 | 49.65% (143) | ZbpA protein |
M. ulcerans Agy99 | MUL_4791 | - | 1e-43 | 53.06% (147) | acyl dehydratase |
M. vanbaalenii PYR-1 | Mvan_1970 | - | 1e-37 | 43.83% (162) | dehydratase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0135|M.bovis_AF2122/97 ------------------MRTFESVADLAAAAGEKVGQSDWVTITQEEVN Rv0130|M.tuberculosis_H37Rv ------------------MRTFESVADLAAAAGEKVGQSDWVTITQEEVN MMAR_0330|M.marinum_M ------------------MRTFESVADLAAAAGETIGQSDWVTITQEDVN MUL_4791|M.ulcerans_Agy99 ------------------MRTFESVADLAAAAGETIGQSDWVTITQEDVN MAV_5174|M.avium_104 ------------------MRTFESVADLAAAAGETLGHSDWVTITQEDVN Mflv_4374|M.gilvum_PYR-GCK ------------------MKRFDNLAELVAAQGTQLGPTEWLEITQERVN Mvan_1970|M.vanbaalenii_PYR-1 MPNIQRRPSSSAGSKETPVKKFNDLAEFVAAEGTQLGPTEWLEITQDRVN MSMEG_2201|M.smegmatis_MC2_155 ------------------MKVFDNLDALAAAAGTELGPTDWLEVTQDRVN TH_0555|M.thermoresistible__bu --MTSRTGTAQPGQSAPAPTVYQGLSEFEAQLGRHLGYSDWHRVTQEQID MAB_1506c|M.abscessus_ATCC_199 -----------------MSTKLATPQELLSLGRVELGTSSWVQITQEQVN : : :* :.* :**: :: Mb0135|M.bovis_AF2122/97 LFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKG Rv0130|M.tuberculosis_H37Rv LFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKG MMAR_0330|M.marinum_M LFADATGDHQWIHVDPERAAKGPFGTTIAHGFMTLSLLPRLQHEMYTVKG MUL_4791|M.ulcerans_Agy99 LFADATGDHQWIHVDPGRAAKGPFGTTIAHGFMTLSLLPRLQHEMYTVKG MAV_5174|M.avium_104 LFADATGDHQWIHVDPERAASGPFGTTIAHGFMTLALLPRLQHQIYTVNG Mflv_4374|M.gilvum_PYR-GCK LFADATDDHQWIHVDPARAADGPFGGTIAHGLLTLSLLPRFTHQLYTVDN Mvan_1970|M.vanbaalenii_PYR-1 LFADATEDHQWIHVDPERAANGPFGGTIAHGLLTLSLLPYFTHQLYTVDN MSMEG_2201|M.smegmatis_MC2_155 LFADATEDHQWIHVDPEKAKTGPFGGTIAHGLLTLSLLPHFTHQLYRVDN TH_0555|M.thermoresistible__bu LFAEATGDRQWIHVDAEKAATGPYGKTIAHGYLTLSLVPLLIKQIYRVEG MAB_1506c|M.abscessus_ATCC_199 EFADATGDRQWIHIDTERAKSGPFGGTIVHGYLTLALAPAFLDEVLEIAS **:** *:****:*. :* **:* **.** :**:* * : .:: : . Mb0135|M.bovis_AF2122/97 VKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVE Rv0130|M.tuberculosis_H37Rv VKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVE MMAR_0330|M.marinum_M IKLAINYGLNKVRFPAPVPVGSRVRAQSSLVGVEDVGNGAVQATVATTVE MUL_4791|M.ulcerans_Agy99 IKLAINYGLNKVRFPAPVPVGSRVRAQSSLVGVEDVGNGAVQATVATTVE MAV_5174|M.avium_104 IKLAINYGLNKVRFPAPVPVGSRVRAQSSLVGVDDLGNGAVQATVSTTVE Mflv_4374|M.gilvum_PYR-GCK VAMAINYGYNKVRFITPVRVGAKLRARAEISAVAQLEN-AVQATLSTTVE Mvan_1970|M.vanbaalenii_PYR-1 VAMAINYGYNKVRFITPVRVGAKLRARAEITAVAQLDN-AVQATVSTTVE MSMEG_2201|M.smegmatis_MC2_155 ITMAINYGYNKVRFITPVRVGAKVRARAQISDVAKLDG-AVQATMTVTVE TH_0555|M.thermoresistible__bu LSMQVNYGVDKLRFPAPVPVDSRIRAGAELVGVERSGN-GARATVRVTVE MAB_1506c|M.abscessus_ATCC_199 YDVVLNYGVNKVRFPAPLHVGARVRGHVTLLSAKRRDKGTVEATYGIKYE : :*** :*:** :*: *.:::*. : . ..** . * Mb0135|M.bovis_AF2122/97 VEGSAKPACVAESIVRYVA Rv0130|M.tuberculosis_H37Rv VEGSAKPACVAESIVRYVA MMAR_0330|M.marinum_M VEGSGKPACVAESVVRYVT MUL_4791|M.ulcerans_Agy99 VEASGKPACVAESVVRYVT MAV_5174|M.avium_104 IDGSAKPACVAESIVRYIS Mflv_4374|M.gilvum_PYR-GCK IEDSEKPAAVAESIVRFIG Mvan_1970|M.vanbaalenii_PYR-1 IQDSDKPAAVAESIVRFIG MSMEG_2201|M.smegmatis_MC2_155 IDGSEKPAAVAESIIRFIG TH_0555|M.thermoresistible__bu VDGGDRPACVVDTIALMVP MAB_1506c|M.abscessus_ATCC_199 IEGKDRPPCAAESVYLYQ- :: :*....:::