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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0399 | rpmC | - | 100% (74) | PROBABLE 50S RIBOSOMAL PROTEIN L29 RPMC |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0729 | rpmC | 9e-31 | 82.19% (73) | 50S ribosomal protein L29 |
| M. gilvum PYR-GCK | Mflv_5041 | - | 4e-32 | 87.50% (72) | 50S ribosomal protein L29 |
| M. tuberculosis H37Rv | Rv0709 | rpmC | 9e-31 | 82.19% (73) | 50S ribosomal protein L29 |
| M. leprae Br4923 | MLBr_01855 | rpmC | 5e-31 | 87.14% (70) | 50S ribosomal protein L29 |
| M. abscessus ATCC 19977 | MAB_3812c | rpmC | 1e-27 | 75.34% (73) | 50S ribosomal protein L29 |
| M. marinum M | MMAR_1039 | rpmC | 9e-30 | 81.94% (72) | 50S ribosomal protein L29, RpmC |
| M. avium 104 | MAV_4463 | rpmC | 2e-31 | 84.93% (73) | 50S ribosomal protein L29 |
| M. smegmatis MC2 155 | MSMEG_1444 | rpmC | 3e-33 | 91.67% (72) | 50S ribosomal protein L29 |
| M. ulcerans Agy99 | MUL_0798 | rpmC | 6e-30 | 81.94% (72) | 50S ribosomal protein L29 |
| M. vanbaalenii PYR-1 | Mvan_1313 | - | 9e-32 | 86.11% (72) | 50S ribosomal protein L29 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0399|M.thermoresistible__bu -----VTPGELRELTDDELKDRLRESKEELFNLRFQMATGQLSNNRRLRI
MSMEG_1444|M.smegmatis_MC2_155 -MAVGTTPGELRELTDDELKDKLRESKEELFNLRFQMATGQLSNNRRLRT
Mflv_5041|M.gilvum_PYR-GCK -MAVGTTTGELRELSDDELTDKLRESKEELFNLRFQMATGQLANNRRLRV
Mvan_1313|M.vanbaalenii_PYR-1 -MAVGTTTGELRELTDEELTDKLRESKEELFNLRFQMATGQLANNRRLRV
MMAR_1039|M.marinum_M -MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRT
MUL_0798|M.ulcerans_Agy99 -MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRT
MLBr_01855|M.leprae_Br4923 MMAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRT
Mb0729|M.bovis_AF2122/97 -MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRT
Rv0709|M.tuberculosis_H37Rv -MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRT
MAV_4463|M.avium_104 -MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRT
MAB_3812c|M.abscessus_ATCC_199 -MTVGISAGELRESTEEELITKLRESKEELFNLRFQMATGQLANNRRLRA
:.***** :::** :******************** ******
TH_0399|M.thermoresistible__bu VRKEIARVYTILRERELGLASGP---GGEDS-
MSMEG_1444|M.smegmatis_MC2_155 VRQEIARVYTVLRERELGLASGP---AGEES-
Mflv_5041|M.gilvum_PYR-GCK VRQEIARVYTVLRERELGLAAGP---GGEDS-
Mvan_1313|M.vanbaalenii_PYR-1 VRQEIARLYTVLRERELGLAAGP---GGEDS-
MMAR_1039|M.marinum_M VRQEIARVYTVLRERELGLAAGPGEPDGKES-
MUL_0798|M.ulcerans_Agy99 VRQEIARVYTVLRERELGLAAGPGEPDGKES-
MLBr_01855|M.leprae_Br4923 VRHEIARVYTVLRERELGLASGPGGANGEES-
Mb0729|M.bovis_AF2122/97 VRQEIARIYTVLRERELGLATGP---DGKES-
Rv0709|M.tuberculosis_H37Rv VRQEIARIYTVLRERELGLATGP---DGKES-
MAV_4463|M.avium_104 VRQEIARVYTVLRERELGLASGP---DGKES-
MAB_3812c|M.abscessus_ATCC_199 VRQEIARIYTVMRERELGLAAGP---DSEDSK
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