For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRTVRHEIARVYTVLRERELGLAS GPGGANGEES*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_01855 | rpmC | - | 100% (81) | 50S ribosomal protein L29 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0729 | rpmC | 2e-34 | 91.89% (74) | 50S ribosomal protein L29 |
| M. gilvum PYR-GCK | Mflv_5041 | - | 2e-30 | 83.78% (74) | 50S ribosomal protein L29 |
| M. tuberculosis H37Rv | Rv0709 | rpmC | 2e-34 | 91.89% (74) | 50S ribosomal protein L29 |
| M. abscessus ATCC 19977 | MAB_3812c | rpmC | 4e-29 | 83.33% (72) | 50S ribosomal protein L29 |
| M. marinum M | MMAR_1039 | rpmC | 1e-35 | 90.00% (80) | 50S ribosomal protein L29, RpmC |
| M. avium 104 | MAV_4463 | rpmC | 8e-34 | 93.24% (74) | 50S ribosomal protein L29 |
| M. smegmatis MC2 155 | MSMEG_1444 | rpmC | 5e-32 | 87.84% (74) | 50S ribosomal protein L29 |
| M. thermoresistible (build 8) | TH_0399 | rpmC | 1e-30 | 87.14% (70) | PROBABLE 50S RIBOSOMAL PROTEIN L29 RPMC |
| M. ulcerans Agy99 | MUL_0798 | rpmC | 7e-36 | 90.00% (80) | 50S ribosomal protein L29 |
| M. vanbaalenii PYR-1 | Mvan_1313 | - | 8e-31 | 85.14% (74) | 50S ribosomal protein L29 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_5041|M.gilvum_PYR-GCK -MAVGTTTGELRELSDDELTDKLRESKEELFNLRFQMATGQLANNRRLRV
Mvan_1313|M.vanbaalenii_PYR-1 -MAVGTTTGELRELTDEELTDKLRESKEELFNLRFQMATGQLANNRRLRV
MSMEG_1444|M.smegmatis_MC2_155 -MAVGTTPGELRELTDDELKDKLRESKEELFNLRFQMATGQLSNNRRLRT
TH_0399|M.thermoresistible__bu -----VTPGELRELTDDELKDRLRESKEELFNLRFQMATGQLSNNRRLRI
Mb0729|M.bovis_AF2122/97 -MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRT
Rv0709|M.tuberculosis_H37Rv -MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRT
MAV_4463|M.avium_104 -MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRT
MMAR_1039|M.marinum_M -MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRT
MUL_0798|M.ulcerans_Agy99 -MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRT
MLBr_01855|M.leprae_Br4923 MMAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRT
MAB_3812c|M.abscessus_ATCC_199 -MTVGISAGELRESTEEELITKLRESKEELFNLRFQMATGQLANNRRLRA
:.***** :::** :******************** ******
Mflv_5041|M.gilvum_PYR-GCK VRQEIARVYTVLRERELGLAAGP---GGEDS-
Mvan_1313|M.vanbaalenii_PYR-1 VRQEIARLYTVLRERELGLAAGP---GGEDS-
MSMEG_1444|M.smegmatis_MC2_155 VRQEIARVYTVLRERELGLASGP---AGEES-
TH_0399|M.thermoresistible__bu VRKEIARVYTILRERELGLASGP---GGEDS-
Mb0729|M.bovis_AF2122/97 VRQEIARIYTVLRERELGLATGP---DGKES-
Rv0709|M.tuberculosis_H37Rv VRQEIARIYTVLRERELGLATGP---DGKES-
MAV_4463|M.avium_104 VRQEIARVYTVLRERELGLASGP---DGKES-
MMAR_1039|M.marinum_M VRQEIARVYTVLRERELGLAAGPGEPDGKES-
MUL_0798|M.ulcerans_Agy99 VRQEIARVYTVLRERELGLAAGPGEPDGKES-
MLBr_01855|M.leprae_Br4923 VRHEIARVYTVLRERELGLASGPGGANGEES-
MAB_3812c|M.abscessus_ATCC_199 VRQEIARIYTVMRERELGLAAGP---DSEDSK
**:****:**::********:** .::*