For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0295 | ppiA | - | 100% (176) | PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) |
M. thermoresistible (build 8) | TH_2333 | ppiB | 2e-15 | 35.16% (182) | PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PPIB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0009 | ppiA | 3e-90 | 88.44% (173) | iron-regulated peptidyl-prolyl cis-trans isomerase A |
M. gilvum PYR-GCK | Mflv_0817 | - | 7e-90 | 87.43% (175) | peptidylprolyl isomerase |
M. tuberculosis H37Rv | Rv0009 | ppiA | 3e-90 | 88.44% (173) | iron-regulated peptidyl-prolyl cis-trans isomerase A |
M. leprae Br4923 | MLBr_00011 | ppiA | 3e-89 | 86.71% (173) | putative peptidyl-prolyl cis-trans isomerase |
M. abscessus ATCC 19977 | MAB_0025 | - | 1e-86 | 84.48% (174) | peptidyl-prolyl cis-trans isomerase |
M. marinum M | MMAR_0011 | ppiA | 8e-90 | 87.86% (173) | peptidyl-prolyl cis-trans isomerase A, PpiA |
M. avium 104 | MAV_0013 | - | 5e-92 | 89.60% (173) | peptidyl-prolyl cis-trans isomerase B |
M. smegmatis MC2 155 | MSMEG_0024 | - | 1e-93 | 90.86% (175) | peptidyl-prolyl cis-trans isomerase B |
M. ulcerans Agy99 | MUL_0013 | ppiA | 5e-90 | 88.44% (173) | peptidyl-prolyl cis-trans isomerase A, PpiA |
M. vanbaalenii PYR-1 | Mvan_0017 | - | 7e-91 | 88.57% (175) | peptidylprolyl isomerase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0817|M.gilvum_PYR-GCK ------MADLIPVT-SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVG Mvan_0017|M.vanbaalenii_PYR-1 MALRPGVAHWIPVT-SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVG MSMEG_0024|M.smegmatis_MC2_155 ------------MT-SPIQTATATLHTNRGDIKIALFGNHAPKTVNNFVG MMAR_0011|M.marinum_M ------MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVG MUL_0013|M.ulcerans_Agy99 ------MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVG Mb0009|M.bovis_AF2122/97 ------MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVG Rv0009|M.tuberculosis_H37Rv ------MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVG MLBr_00011|M.leprae_Br4923 ------MAHCDFVTNSLIQNATATLHTNRGDIKVALFGNHVPKTVANFVG MAV_0013|M.avium_104 ------------MTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVG TH_0295|M.thermoresistible__bu -------------VTSPIQTATATLHTNRGDIKIALFGNHAPKTVANFVG MAB_0025|M.abscessus_ATCC_1997 ----------MTSPTSPIQTATATLHTNRGDVVIALFGNHAPKTVANFVG * : .***********: :******.**** **** Mflv_0817|M.gilvum_PYR-GCK LAQGTKEYSTENASGGSSGPFYDGVIFHRVIEGFMIQGGDPTGTGRGDAG Mvan_0017|M.vanbaalenii_PYR-1 LAQGTKEYSTENASGGSSGPFYDGVIFHRVIEGFMIQGGDPTGTGRGDAG MSMEG_0024|M.smegmatis_MC2_155 LAQGTKDYSTENASGGTSGPFYDGAVFHRVIDGFMIQGGDPTGTGRGGPG MMAR_0011|M.marinum_M LAQGTKEYSTQNASGSTSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG MUL_0013|M.ulcerans_Agy99 LAQGTKEYSTQNASGSTSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG Mb0009|M.bovis_AF2122/97 LAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG Rv0009|M.tuberculosis_H37Rv LAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG MLBr_00011|M.leprae_Br4923 LAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG MAV_0013|M.avium_104 LAQGTKEYSTQNASGGSSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG TH_0295|M.thermoresistible__bu LAQGTRDYSTQNASGSTSGPFYDGAIFHRVIQGFMIQGGDPTGTGRGGPG MAB_0025|M.abscessus_ATCC_1997 LADGSKEYSTKNAKGEAAGPFYDGAIFHRVIDGFMIQGGDPTGTGRGGPG **:*:::***:**.* .:******.:***** ***************..* Mflv_0817|M.gilvum_PYR-GCK YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVTETPHLNRRHTIF Mvan_0017|M.vanbaalenii_PYR-1 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVTETPHLNRRHTIF MSMEG_0024|M.smegmatis_MC2_155 YKFEDEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF MMAR_0011|M.marinum_M YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGPTPHLNRRHTIF MUL_0013|M.ulcerans_Agy99 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGPTPHLNRRHTIF Mb0009|M.bovis_AF2122/97 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF Rv0009|M.tuberculosis_H37Rv YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF MLBr_00011|M.leprae_Br4923 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIF MAV_0013|M.avium_104 YKFADEFHPELQFDRPYLLAMANAGPGTNGSQFFITVDKTPHLNRRHTIF TH_0295|M.thermoresistible__bu YQFEDEFHPELQFDRPYLLAMANAGPGTNGSQFFITVDQTPHLNRRHTIF MAB_0025|M.abscessus_ATCC_1997 YQFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF *:* **********:********************** *********** Mflv_0817|M.gilvum_PYR-GCK GEVVDPESRKVVDAIATTATDRSDRPVEPVVIESITIS Mvan_0017|M.vanbaalenii_PYR-1 GEVVDPESRKVVDAIATTATDRSDRPTDPVVIESITIS MSMEG_0024|M.smegmatis_MC2_155 GEVVDEESQKVVDAIASTPTDRSDRPTEPVVIESITIA MMAR_0011|M.marinum_M GEVSDPDSQRVVETIATTSTDGSDRPTEPVVIESITIS MUL_0013|M.ulcerans_Agy99 GEVSDPDSQGVVEAIATTSTDGSDRPTEPVVIESITIS Mb0009|M.bovis_AF2122/97 GEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS Rv0009|M.tuberculosis_H37Rv GEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS MLBr_00011|M.leprae_Br4923 GEVTDPDSQKVVDAISTTATDGNDRPTEPVVIDSITIS MAV_0013|M.avium_104 GEVVDPESQKVVDAISTTSTDGNDRPSEPVVIESITIS TH_0295|M.thermoresistible__bu GEVVDPESQKVVDAIAATPTDRNDRPTDPVVIESVTIS MAB_0025|M.abscessus_ATCC_1997 GEVVDPASQQVVDSIASTAVDRGDRPTEDVVINSITIS *** * *: **::*: *..* .*** : ***:*:**: