For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAV FHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRR HTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv0009 | ppiA | - | 100% (182) | PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) |
| M. tuberculosis H37Rv | Rv2582 | ppiB | 9e-19 | 34.95% (186) | peptidyl-prolyl cis-trans isomerase B |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0009 | ppiA | 1e-105 | 100.00% (182) | iron-regulated peptidyl-prolyl cis-trans isomerase A |
| M. gilvum PYR-GCK | Mflv_0817 | - | 1e-87 | 84.07% (182) | peptidylprolyl isomerase |
| M. leprae Br4923 | MLBr_00011 | ppiA | 1e-96 | 90.11% (182) | putative peptidyl-prolyl cis-trans isomerase |
| M. abscessus ATCC 19977 | MAB_0025 | - | 1e-84 | 83.24% (173) | peptidyl-prolyl cis-trans isomerase |
| M. marinum M | MMAR_0011 | ppiA | 1e-96 | 90.66% (182) | peptidyl-prolyl cis-trans isomerase A, PpiA |
| M. avium 104 | MAV_0013 | - | 6e-94 | 90.91% (176) | peptidyl-prolyl cis-trans isomerase B |
| M. smegmatis MC2 155 | MSMEG_0024 | - | 2e-90 | 89.60% (173) | peptidyl-prolyl cis-trans isomerase B |
| M. thermoresistible (build 8) | TH_0295 | ppiA | 3e-90 | 88.44% (173) | PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| M. ulcerans Agy99 | MUL_0013 | ppiA | 2e-96 | 90.66% (182) | peptidyl-prolyl cis-trans isomerase A, PpiA |
| M. vanbaalenii PYR-1 | Mvan_0017 | - | 3e-88 | 87.28% (173) | peptidylprolyl isomerase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0817|M.gilvum_PYR-GCK ------MADLIPVT-SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVG
Mvan_0017|M.vanbaalenii_PYR-1 MALRPGVAHWIPVT-SPIQTATATLHTNRGDIKIALFGNHAPKTVSNFVG
MSMEG_0024|M.smegmatis_MC2_155 ------------MT-SPIQTATATLHTNRGDIKIALFGNHAPKTVNNFVG
Rv0009|M.tuberculosis_H37Rv ------MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVG
Mb0009|M.bovis_AF2122/97 ------MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVG
MLBr_00011|M.leprae_Br4923 ------MAHCDFVTNSLIQNATATLHTNRGDIKVALFGNHVPKTVANFVG
MMAR_0011|M.marinum_M ------MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVG
MUL_0013|M.ulcerans_Agy99 ------MADCDSVTNSPIQTATATLHTNRGDIKVALFGNHAPKTVANFVG
MAV_0013|M.avium_104 ------------MTNSPFQTATATLHTNRGDIKVALFGNHAPKTVANFVG
TH_0295|M.thermoresistible__bu -------------VTSPIQTATATLHTNRGDIKIALFGNHAPKTVANFVG
MAB_0025|M.abscessus_ATCC_1997 ----------MTSPTSPIQTATATLHTNRGDVVIALFGNHAPKTVANFVG
* : .***********: :******.**** ****
Mflv_0817|M.gilvum_PYR-GCK LAQGTKEYSTENASGGSSGPFYDGVIFHRVIEGFMIQGGDPTGTGRGDAG
Mvan_0017|M.vanbaalenii_PYR-1 LAQGTKEYSTENASGGSSGPFYDGVIFHRVIEGFMIQGGDPTGTGRGDAG
MSMEG_0024|M.smegmatis_MC2_155 LAQGTKDYSTENASGGTSGPFYDGAVFHRVIDGFMIQGGDPTGTGRGGPG
Rv0009|M.tuberculosis_H37Rv LAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG
Mb0009|M.bovis_AF2122/97 LAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG
MLBr_00011|M.leprae_Br4923 LAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPG
MMAR_0011|M.marinum_M LAQGTKEYSTQNASGSTSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG
MUL_0013|M.ulcerans_Agy99 LAQGTKEYSTQNASGSTSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG
MAV_0013|M.avium_104 LAQGTKEYSTQNASGGSSGPFYDGAVFHRVIRGFMIQGGDPTGTGRGGPG
TH_0295|M.thermoresistible__bu LAQGTRDYSTQNASGSTSGPFYDGAIFHRVIQGFMIQGGDPTGTGRGGPG
MAB_0025|M.abscessus_ATCC_1997 LADGSKEYSTKNAKGEAAGPFYDGAIFHRVIDGFMIQGGDPTGTGRGGPG
**:*:::***:**.* .:******.:***** ***************..*
Mflv_0817|M.gilvum_PYR-GCK YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVTETPHLNRRHTIF
Mvan_0017|M.vanbaalenii_PYR-1 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVTETPHLNRRHTIF
MSMEG_0024|M.smegmatis_MC2_155 YKFEDEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF
Rv0009|M.tuberculosis_H37Rv YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF
Mb0009|M.bovis_AF2122/97 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF
MLBr_00011|M.leprae_Br4923 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIF
MMAR_0011|M.marinum_M YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGPTPHLNRRHTIF
MUL_0013|M.ulcerans_Agy99 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGPTPHLNRRHTIF
MAV_0013|M.avium_104 YKFADEFHPELQFDRPYLLAMANAGPGTNGSQFFITVDKTPHLNRRHTIF
TH_0295|M.thermoresistible__bu YQFEDEFHPELQFDRPYLLAMANAGPGTNGSQFFITVDQTPHLNRRHTIF
MAB_0025|M.abscessus_ATCC_1997 YQFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIF
*:* **********:********************** ***********
Mflv_0817|M.gilvum_PYR-GCK GEVVDPESRKVVDAIATTATDRSDRPVEPVVIESITIS
Mvan_0017|M.vanbaalenii_PYR-1 GEVVDPESRKVVDAIATTATDRSDRPTDPVVIESITIS
MSMEG_0024|M.smegmatis_MC2_155 GEVVDEESQKVVDAIASTPTDRSDRPTEPVVIESITIA
Rv0009|M.tuberculosis_H37Rv GEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
Mb0009|M.bovis_AF2122/97 GEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
MLBr_00011|M.leprae_Br4923 GEVTDPDSQKVVDAISTTATDGNDRPTEPVVIDSITIS
MMAR_0011|M.marinum_M GEVSDPDSQRVVETIATTSTDGSDRPTEPVVIESITIS
MUL_0013|M.ulcerans_Agy99 GEVSDPDSQGVVEAIATTSTDGSDRPTEPVVIESITIS
MAV_0013|M.avium_104 GEVVDPESQKVVDAISTTSTDGNDRPSEPVVIESITIS
TH_0295|M.thermoresistible__bu GEVVDPESQKVVDAIAATPTDRNDRPTDPVVIESVTIS
MAB_0025|M.abscessus_ATCC_1997 GEVVDPASQQVVDSIASTAVDRGDRPTEDVVINSITIS
*** * *: **::*: *..* .*** : ***:*:**: