For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0254 | - | 100% (129) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_4219 | - | 3e-05 | 29.52% (105) | PUTATIVE pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2087c | - | 1e-47 | 68.99% (129) | hypothetical protein Mb2087c |
M. gilvum PYR-GCK | Mflv_3113 | - | 2e-49 | 71.54% (123) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
M. tuberculosis H37Rv | Rv2061c | - | 1e-47 | 68.99% (129) | hypothetical protein Rv2061c |
M. leprae Br4923 | MLBr_01446 | - | 2e-45 | 64.84% (128) | hypothetical protein MLBr_01446 |
M. abscessus ATCC 19977 | MAB_2203 | - | 1e-30 | 53.33% (120) | hypothetical protein MAB_2203 |
M. marinum M | MMAR_3036 | - | 1e-48 | 73.81% (126) | hypothetical protein MMAR_3036 |
M. avium 104 | MAV_2442 | - | 2e-50 | 73.02% (126) | pyridoxamine 5'-phosphate oxidase family protein |
M. smegmatis MC2 155 | MSMEG_3863 | - | 4e-53 | 76.98% (126) | pyridoxamine 5'-phosphate oxidase family protein |
M. ulcerans Agy99 | MUL_2276 | - | 1e-47 | 71.65% (127) | hypothetical protein MUL_2276 |
M. vanbaalenii PYR-1 | Mvan_3423 | - | 3e-51 | 73.77% (122) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3113|M.gilvum_PYR-GCK -----MTVTFADVAKSEYILLTTFTKDGRPKPTAIWAAPA---GEALIAI Mvan_3423|M.vanbaalenii_PYR-1 -----MTASFADVAESEYILLTTFTKDGRPKPTAIWAVPS---GEGLVAI TH_0254|M.thermoresistible__bu -----VPVTFDDIATSDYILLTTFTKDGRPKPTPVWAAPD---GDGLLVI MSMEG_3863|M.smegmatis_MC2_155 -----MAITFADVAKSKYILLTTFTKDGRPKPTAIWAAPK---GDRLLVI MMAR_3036|M.marinum_M -----MIPTFADLAKAQYILLTTFTKDGRPKPVPVWAALDGDHGDRLLVI MUL_2276|M.ulcerans_Agy99 -----MTPTFADLAKAQYILLTTFTKDGRPKPVPVWAALDGDHGDRL--I MAV_2442|M.avium_104 -----MTPTFADLAKAQYILLTTFTKDGKPKPTPIWAAAD---KDRLLVI Mb2087c|M.bovis_AF2122/97 -----MTPTFSDLAEAQYLLLTTFTKDGRPKPVPIWAALDTDRGDRLLVI Rv2061c|M.tuberculosis_H37Rv -----MTPTFSDLAEAQYLLLTTFTKDGRPKPVPIWAALDTDRGDRLLVI MLBr_01446|M.leprae_Br4923 -----MTPTFADLAKAKYILLTTFTKDGRPKPTPIWAAAD---GDRLLAI MAB_2203|M.abscessus_ATCC_1997 MGANLTVPTFDDICAAKYVLLTTYTKDGRAKPAAVWAAPE---NGELLVW :* *:. :.*:****:****:.**..:**. * Mflv_3113|M.gilvum_PYR-GCK TQEKSWKVKRLRNTPRVTIAECDRAGKPKGEAVEATAAILPKTMNAKTYD Mvan_3423|M.vanbaalenii_PYR-1 TQEGSWKVKRIRNTPRVTIAKCDRRGNPKGEPVEATARILDKSANATTYD TH_0254|M.thermoresistible__bu TQEKSWKVKRIRNTPRVTIAKCDMRGNPTSEPVEAVATILDKSRTGEVYD MSMEG_3863|M.smegmatis_MC2_155 TEENSWKVKRIRNTPRVTVAACDARGNPKSEAVEAHAEILDKSRTGEVYD MMAR_3036|M.marinum_M TEGKSWKVKRIRNTPRVTLAICDMRGRPKSEAVEGTAAILDKSQTAAVYD MUL_2276|M.ulcerans_Agy99 TEGKSWKVKRIRNTPRVTLAICDMRGRPKGEAVEGTAAILDKSQTAAVYD MAV_2442|M.avium_104 TQEKSWKVKRIRHTPRVTLATCTMNGRPTSEAVEGTAAILDKSQTAAVYD Mb2087c|M.bovis_AF2122/97 TEKKSWKVKRIRNTPRVTLATCTLRGRPTSEAVEATAAILDESQTGAVYD Rv2061c|M.tuberculosis_H37Rv TEKKSWKVKRIRNTPRVTLATCTLRGRPTSEAVEATAAILDESQTGAVYD MLBr_01446|M.leprae_Br4923 SAGKAWKVKRIRNNPRITLATCNVRGCATSAGVQGNATILDKLQTGSVYD MAB_2203|M.abscessus_ATCC_1997 TETNSWKVRRIRNTPRVTLAVCDVRGNVRSGEIEGTARVLDADGTERARA : :***:*:*:.**:*:* * * . ::. * :* . . Mflv_3113|M.gilvum_PYR-GCK ALGKRYGLLGKTFNFFSKLRGGMEKNVSIEIRPVK---- Mvan_3423|M.vanbaalenii_PYR-1 ALGRRYGLLGKTFNFFSKLRGGMEKNVSIELRPVN---- TH_0254|M.thermoresistible__bu AIGKRYGLLGKAFNFFSKLRGGMRTNVGLKIRPAGT--- MSMEG_3863|M.smegmatis_MC2_155 AIGSRYGLMGKAFNLFSKLRRGMERNIGLELRAAEGTA- MMAR_3036|M.marinum_M AIGKRYGIVGKVFNLFSKLRGGMDKNVGLELRVA----- MUL_2276|M.ulcerans_Agy99 AIGKRYGIVGKVFNLFSKLRGGMDKNVGLELRVA----- MAV_2442|M.avium_104 AIGKRYGVVGKVFNFFSKLRGGMANNVGLELKVA----- Mb2087c|M.bovis_AF2122/97 AIVKRYGIQGKLFTFVSKLRGGMRNNIGLELKVAESETG Rv2061c|M.tuberculosis_H37Rv AIVKRYGIQGKLFTFVSKLRGGMRNNIGLELKVAESETG MLBr_01446|M.leprae_Br4923 AICKQYGIQGRLFNFVSKLRGGMQNNVGLELRVSGS--- MAB_2203|M.abscessus_ATCC_1997 AITRKYGVLGWLLVKASILRRGRSGTIGLAITG------ *: :**: * : * ** * .:.: :