For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0120 | - | 100% (121) | PROBABLE CONSERVED LIPOPROTEIN LPRD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1378c | lprD | 4e-41 | 66.67% (120) | lipoprotein LprD |
| M. gilvum PYR-GCK | Mflv_2363 | - | 9e-45 | 67.44% (129) | putative lipoprotein |
| M. tuberculosis H37Rv | Rv1343c | lprD | 8e-42 | 67.50% (120) | lipoprotein LprD |
| M. leprae Br4923 | MLBr_01177 | - | 3e-40 | 61.98% (121) | putative lipoprotein |
| M. abscessus ATCC 19977 | MAB_1488c | - | 5e-29 | 59.81% (107) | hypothetical protein MAB_1488c |
| M. marinum M | MMAR_4038 | lprD | 6e-43 | 69.17% (120) | lipoprotein LprD |
| M. avium 104 | MAV_1560 | - | 2e-43 | 73.73% (118) | hypothetical protein MAV_1560 |
| M. smegmatis MC2 155 | MSMEG_4898 | - | 3e-44 | 70.34% (118) | hypothetical protein MSMEG_4898 |
| M. ulcerans Agy99 | MUL_3904 | lprD | 2e-42 | 68.33% (120) | lipoprotein LprD |
| M. vanbaalenii PYR-1 | Mvan_4283 | - | 5e-49 | 70.99% (131) | putative lipoprotein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0120|M.thermoresistible__bu --------------LILLVITAAAGCLALAWWQWTRFESASGDFQNLGYA
Mvan_4283|M.vanbaalenii_PYR-1 MSTT----RRRRPALILLVIAAAAGCLALAWWQWTRYESTSGSFQNLGYA
Mflv_2363|M.gilvum_PYR-GCK MSTT----RRRRPALILLATAAALGCLALAWWQWTRYESTSGSFQNLGYA
MSMEG_4898|M.smegmatis_MC2_155 MSTT----RRRRPALILLVFVAAAGCMALAWWQWTRFESNSGTFQNLGYA
Mb1378c|M.bovis_AF2122/97 MSTT----RRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYA
Rv1343c|M.tuberculosis_H37Rv MSTT----RRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYA
MLBr_01177|M.leprae_Br4923 MSTT----RRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYA
MMAR_4038|M.marinum_M MSTTTPRRRARRPALIALVIIAASGCLALGWWQWTRFESTSGSFQNLGYA
MUL_3904|M.ulcerans_Agy99 MSTTTPRRRARRPALIALVIIAASGCLALGWWQWTRFESTSGSFQNLGYA
MAV_1560|M.avium_104 ------------------MIIAACGCLALGWWQWTRFQSVSGSFQNLGYA
MAB_1488c|M.abscessus_ATCC_199 ----------------MLVGVSVVAFLGLAYWQFQRFESVTGDGQNLGYA
:. . :.*.:**: *::* :* ******
TH_0120|M.thermoresistible__bu LQWPLFAGFCVYAYFKFVRYEESPPEPK-RDTPTELPAGLLPERPQPATP
Mvan_4283|M.vanbaalenii_PYR-1 MQWPLFAGFCVYAYFKFVRYEEAPPEPHPHDAVTEIPAGLLPERPQPARR
Mflv_2363|M.gilvum_PYR-GCK MQWPLFAGFCFYAYFKFVRYEEAPPELHPQDAVTEIPAGLLPERPRPTTP
MSMEG_4898|M.smegmatis_MC2_155 LQWPMFAGFCFYAYYKFVRYEEAPPE-RPKDTVTEIPEGLLPERPR-HVA
Mb1378c|M.bovis_AF2122/97 LQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAAAIPAGLLPERPKPAQQ
Rv1343c|M.tuberculosis_H37Rv LQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAAEIPAGLLPERPKPAQQ
MLBr_01177|M.leprae_Br4923 LQWPLFAGFCLYTYHNFVRYEESPPQPRHMNCIAEIPPELLPARPKPEQQ
MMAR_4038|M.marinum_M LQWPMFAWFCVYAYRKFVRYEETPPQPRDPAAVTEIPAGLLPQRTTPDQA
MUL_3904|M.ulcerans_Agy99 LQWPMFAWFCVYAYRKFVRYEETPPQPRDPAAATEIPAGLLPQRTTPDQA
MAV_1560|M.avium_104 LQWPLFAWFCVYAYRKFVRYEEEPPRPRDTAAVTEIPAGLLPERPRPTPR
MAB_1488c|M.abscessus_ATCC_199 LQWPLFAAFVIWAYRRFVQYEDEGPPPPPTDRVTEIPEGLLPERPAAAKP
:***:** * .::* .**:**: * : :* *** *.
TH_0120|M.thermoresistible__bu ----------ADDADDDPTLREYNAYLAQLAAQLADSDKQDRTST
Mvan_4283|M.vanbaalenii_PYR-1 GNANRDADPDNDDPDDDTTLREYNAYLAELAKADAEDQKMTGTGT
Mflv_2363|M.gilvum_PYR-GCK RGVEPDDAVGTDPDDADPTLREYNAYLAELARTDDETPADKRTR-
MSMEG_4898|M.smegmatis_MC2_155 R--------ERTADDDDPALAEYNAYLAELAKKKEQ---DR----
Mb1378c|M.bovis_AF2122/97 -------------PPDDPVLREYNAYLAELAKDDARKQNRTTA--
Rv1343c|M.tuberculosis_H37Rv -------------PPDDPVLREYNAYLAELAKDDARKQNRTTA--
MLBr_01177|M.leprae_Br4923 -------------PPDDPALRKYNTYLAELAKQDAENHNRTTT--
MMAR_4038|M.marinum_M -------------APDDPALREYNAYLAALAEDDAEKQNRTTA--
MUL_3904|M.ulcerans_Agy99 -------------APDDPALREYNAYLDALAEDDAEKQNRTTA--
MAV_1560|M.avium_104 -------------PPDDPALREYNRYLAELAAQDAAQQDRTTT--
MAB_1488c|M.abscessus_ATCC_199 -------------DPADRTLTEYNAYLAALAEEDRKPAP------
* .* :** ** **