For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STTRRRRPALILLATAAALGCLALAWWQWTRYESTSGSFQNLGYAMQWPLFAGFCFYAYFKFVRYEEAPP ELHPQDAVTEIPAGLLPERPRPTTPRGVEPDDAVGTDPDDADPTLREYNAYLAELARTDDETPADKRTR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2363 | - | - | 100% (140) | putative lipoprotein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1378c | lprD | 1e-43 | 64.62% (130) | lipoprotein LprD |
M. tuberculosis H37Rv | Rv1343c | lprD | 2e-44 | 65.38% (130) | lipoprotein LprD |
M. leprae Br4923 | MLBr_01177 | - | 1e-43 | 60.61% (132) | putative lipoprotein |
M. abscessus ATCC 19977 | MAB_1488c | - | 6e-28 | 50.41% (123) | hypothetical protein MAB_1488c |
M. marinum M | MMAR_4038 | lprD | 5e-43 | 65.44% (136) | lipoprotein LprD |
M. avium 104 | MAV_1560 | - | 3e-39 | 69.91% (113) | hypothetical protein MAV_1560 |
M. smegmatis MC2 155 | MSMEG_4898 | - | 6e-49 | 68.94% (132) | hypothetical protein MSMEG_4898 |
M. thermoresistible (build 8) | TH_0120 | - | 1e-44 | 67.44% (129) | PROBABLE CONSERVED LIPOPROTEIN LPRD |
M. ulcerans Agy99 | MUL_3904 | lprD | 5e-42 | 63.97% (136) | lipoprotein LprD |
M. vanbaalenii PYR-1 | Mvan_4283 | - | 5e-58 | 81.20% (133) | putative lipoprotein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1378c|M.bovis_AF2122/97 MSTT----RRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYA Rv1343c|M.tuberculosis_H37Rv MSTT----RRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYA MLBr_01177|M.leprae_Br4923 MSTT----RRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYA MMAR_4038|M.marinum_M MSTTTPRRRARRPALIALVIIAASGCLALGWWQWTRFESTSGSFQNLGYA MUL_3904|M.ulcerans_Agy99 MSTTTPRRRARRPALIALVIIAASGCLALGWWQWTRFESTSGSFQNLGYA MAV_1560|M.avium_104 ------------------MIIAACGCLALGWWQWTRFQSVSGSFQNLGYA Mflv_2363|M.gilvum_PYR-GCK MSTT----RRRRPALILLATAAALGCLALAWWQWTRYESTSGSFQNLGYA MSMEG_4898|M.smegmatis_MC2_155 MSTT----RRRRPALILLVFVAAAGCMALAWWQWTRFESNSGTFQNLGYA TH_0120|M.thermoresistible__bu --------------LILLVITAAAGCLALAWWQWTRFESASGDFQNLGYA Mvan_4283|M.vanbaalenii_PYR-1 MSTT----RRRRPALILLVIAAAAGCLALAWWQWTRYESTSGSFQNLGYA MAB_1488c|M.abscessus_ATCC_199 ----------------MLVGVSVVAFLGLAYWQFQRFESVTGDGQNLGYA :. . :.*.:**: *::* :* ****** Mb1378c|M.bovis_AF2122/97 LQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAAAIPAGLLPERPKPAQQ Rv1343c|M.tuberculosis_H37Rv LQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAAEIPAGLLPERPKPAQQ MLBr_01177|M.leprae_Br4923 LQWPLFAGFCLYTYHNFVRYEESPPQPRHMNCIAEIPPELLPARPKPEQQ MMAR_4038|M.marinum_M LQWPMFAWFCVYAYRKFVRYEETPPQPRDPAAVTEIPAGLLPQRTTPDQA MUL_3904|M.ulcerans_Agy99 LQWPMFAWFCVYAYRKFVRYEETPPQPRDPAAATEIPAGLLPQRTTPDQA MAV_1560|M.avium_104 LQWPLFAWFCVYAYRKFVRYEEEPPRPRDTAAVTEIPAGLLPERPRPTPR Mflv_2363|M.gilvum_PYR-GCK MQWPLFAGFCFYAYFKFVRYEEAPPELHPQDAVTEIPAGLLPERPRPTTP MSMEG_4898|M.smegmatis_MC2_155 LQWPMFAGFCFYAYYKFVRYEEAPPE-RPKDTVTEIPEGLLPERPR-HVA TH_0120|M.thermoresistible__bu LQWPLFAGFCVYAYFKFVRYEESPPEPK-RDTPTELPAGLLPERPQPATP Mvan_4283|M.vanbaalenii_PYR-1 MQWPLFAGFCVYAYFKFVRYEEAPPEPHPHDAVTEIPAGLLPERPQPARR MAB_1488c|M.abscessus_ATCC_199 LQWPLFAAFVIWAYRRFVQYEDEGPPPPPTDRVTEIPEGLLPERPAAAKP :***:** * .::* .**:**: * : :* *** *. Mb1378c|M.bovis_AF2122/97 -------------PPDDPVLREYNAYLAELAKDDARKQNRTTA-- Rv1343c|M.tuberculosis_H37Rv -------------PPDDPVLREYNAYLAELAKDDARKQNRTTA-- MLBr_01177|M.leprae_Br4923 -------------PPDDPALRKYNTYLAELAKQDAENHNRTTT-- MMAR_4038|M.marinum_M -------------APDDPALREYNAYLAALAEDDAEKQNRTTA-- MUL_3904|M.ulcerans_Agy99 -------------APDDPALREYNAYLDALAEDDAEKQNRTTA-- MAV_1560|M.avium_104 -------------PPDDPALREYNRYLAELAAQDAAQQDRTTT-- Mflv_2363|M.gilvum_PYR-GCK RGVEPDDAVGTDPDDADPTLREYNAYLAELARTDDETPADKRTR- MSMEG_4898|M.smegmatis_MC2_155 R--------ERTADDDDPALAEYNAYLAELAKKKEQ---DR---- TH_0120|M.thermoresistible__bu ----------ADDADDDPTLREYNAYLAQLAAQLADSDKQDRTST Mvan_4283|M.vanbaalenii_PYR-1 GNANRDADPDNDDPDDDTTLREYNAYLAELAKADAEDQKMTGTGT MAB_1488c|M.abscessus_ATCC_199 -------------DPADRTLTEYNAYLAALAEEDRKPAP------ * .* :** ** **