For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0095 | - | 100% (382) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0930 | - | 1e-154 | 67.66% (368) | hypothetical protein Mb0930 |
M. gilvum PYR-GCK | Mflv_1756 | - | 1e-144 | 64.59% (370) | beta-lactamase domain-containing protein |
M. tuberculosis H37Rv | Rv0906 | - | 1e-154 | 67.66% (368) | hypothetical protein Rv0906 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0960 | - | 1e-122 | 56.47% (363) | hypothetical protein MAB_0960 |
M. marinum M | MMAR_4624 | - | 1e-152 | 66.58% (368) | hypothetical protein MMAR_4624 |
M. avium 104 | MAV_1029 | - | 1e-150 | 66.22% (370) | metallo-beta-lactamase family protein |
M. smegmatis MC2 155 | MSMEG_5638 | - | 1e-150 | 69.60% (375) | metallo-beta-lactamase family protein |
M. ulcerans Agy99 | MUL_0235 | - | 1e-150 | 66.30% (368) | hypothetical protein MUL_0235 |
M. vanbaalenii PYR-1 | Mvan_4991 | - | 1e-148 | 66.03% (368) | hypothetical protein Mvan_4991 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0930|M.bovis_AF2122/97 -MVRRALRLAAGTAS---LAAGTWLLRALHGTPAALGADAASIRAVSEQS Rv0906|M.tuberculosis_H37Rv -MVRRALRLAAGTAS---LAAGTWLLRALHGTPAALGADAASIRAVSEQS MMAR_4624|M.marinum_M -MVGRALRLAAGTAS---LAAGGWLMRALHGAPAALGADPAAIEAASDGS MUL_0235|M.ulcerans_Agy99 -MVGRALRLAAGTAS---LAAGGWLMRALRGAPAALGADPAAIEAASDGS MAV_1029|M.avium_104 --MRGTLRLVAGTAS---LAAGGWLVRALHGAPDALGADPASIAAVTSGS TH_0095|M.thermoresistible__bu -MSRSWLGLMRQAAGVATVLGGGWLIRALRGAPAAVGADRRDIRPVAQRS MSMEG_5638|M.smegmatis_MC2_155 -MLRAALRLTTRSAG---LLAGGWLLGALRGTYASVGAQPRDIKPVATRS Mflv_1756|M.gilvum_PYR-GCK MVVRTALRFGFGTTS---LLAGGWVLRALHGTPASLGATPAEIAPVARRS Mvan_4991|M.vanbaalenii_PYR-1 MEVRTALRFGFGTAS---LFAGGWVLRALQGTPAALGATPPEIAPVARRS MAB_0960|M.abscessus_ATCC_1997 ---MRALWVGAGAAI-----ASTWIGRALRDVPQTLGASKGRIAEVAKGS * . :: .. *: **:.. ::** * .: * Mb0930|M.bovis_AF2122/97 PNYRDGAFVNLDPAS-MFTLDREELRLIVWELVARHSASRPAAPIPLASP Rv0906|M.tuberculosis_H37Rv PNYRDGAFVNLDPAS-MFTLDREELRLIVWELVARHSASRPAAPIPLASP MMAR_4624|M.marinum_M PNYRDGVFVNLDPAS-VFTLNREEMRLLAWELLANRGGSRPAKPIPLAAP MUL_0235|M.ulcerans_Agy99 PYYRDGVFVNLDPAS-VFTLNREEMRLLAWELLANRGGSRPAKPIPLAAP MAV_1029|M.avium_104 PHFRDGAFVNLEPAS-EIKMDREQLRLIAWELIANRGGSRPPAAIPLASP TH_0095|M.thermoresistible__bu PNYRDGAFVNLDPAS-MISLDRQQQWVLAREFLDGRAATRPAAPIPLVTP MSMEG_5638|M.smegmatis_MC2_155 PQFDGKVFVNIEPASPGINLDREERRRLFAEMFGSKGASWPPGEIPLAEP Mflv_1756|M.gilvum_PYR-GCK PHYKDGRFVNLESSSSGLPMDRELQRKLLRDLANAGSAGKPPRPIPLKEP Mvan_4991|M.vanbaalenii_PYR-1 PHYQDGKFVNLEPPS-GITMDRDLQRMLLRDLANFASQGTPPGPIPLADP MAB_0960|M.abscessus_ATCC_1997 PQYRGGTFHNAEPAR-QFSPDAETT-TVVWDVLTRRGVGTPKGQVPLAVP * : . * * :.. : : : : :. . * :** * Mb0930|M.bovis_AF2122/97 NIYRG--DASRLAVSWFGHSTALLEIDGYRVLTDPVWSDRCSPSDVVGPQ Rv0906|M.tuberculosis_H37Rv NIYRG--DASRLAVSWFGHSTALLEIDGYRVLTDPVWSDRCSPSDVVGPQ MMAR_4624|M.marinum_M QVYQG--DASRLAVSWFGHSTAMVEIDGYRVLTDPVWSDRCSPSDLVGPQ MUL_0235|M.ulcerans_Agy99 QVYQG--DASRLAVSWFGHSTAMVEIDGYRVLTDPVWSDRCSPSDLVGPQ MAV_1029|M.avium_104 GVVDA--DPSRLAVSWFGHSTALLEIDGYRVLTDPVWSERCSPSDIVGPQ TH_0095|M.thermoresistible__bu NPADHGVGAADLAVRWYGHSTAMVEVDGYRVLTDPIWSRRCSPSALVGPR MSMEG_5638|M.smegmatis_MC2_155 TEAET-AEAKPCAVSWYGHSSALIEVDGYRVLTDPIWSDRCSPSRVVGPR Mflv_1756|M.gilvum_PYR-GCK PTVEP--TGADAAASWYGHSSALIEVDGYRVLVDPVWSERCSPSRTVGPQ Mvan_4991|M.vanbaalenii_PYR-1 PVVDP--TPAPAAASWYGHSSTLIEVDGYRVLADPVWSNRCSPSRAVGPQ MAB_0960|M.abscessus_ATCC_1997 ELSGP---PADLAATWFGHSSVLVEIDGYRVLTDPVWSDRCSPSRVVGPH *. *:***:.::*:******.**:** ***** ***: Mb0930|M.bovis_AF2122/97 RLHPPPVQLAALPAVDAVVISHDHYDHLDIDTVVALVGMQRAPFLVPLGV Rv0906|M.tuberculosis_H37Rv RLHPPPVQLAALPAVDAVVISHDHYDHLDIDTVVALVGMQRAPFLVPLGV MMAR_4624|M.marinum_M RLHPPPVQLDGLPAVDAVVISHDHYDHLDIDTVIALVRSQRAPFFVPLGV MUL_0235|M.ulcerans_Agy99 RLHPPPVQLDGLPAVDAVVISHDHYDHLDIDTVIALVRSQRAPFFVPLGV MAV_1029|M.avium_104 RLHPPPIQLEGLPAVDAVVISHDHYDHLDIDTVRALARTQRAPFFVPLGV TH_0095|M.thermoresistible__bu RLHEPPTPLEALPAVDAVLISHDHYDHLDMDTVVRLARTQRAPFLVPLGV MSMEG_5638|M.smegmatis_MC2_155 RLHAPPVPLEALPAVDAVVISHDHYDHLDIDTVRGLARTQRAPFLVPLGI Mflv_1756|M.gilvum_PYR-GCK RMHDVPLLLESLPAVDAVVISHDHYDHLDIDTIIALARTQRAPFVVPLGI Mvan_4991|M.vanbaalenii_PYR-1 RMHDVPVLIEALPAVDAVIISHDHYDHLDIDTIVALAHTQRAPFVVPLGI MAB_0960|M.abscessus_ATCC_1997 RQHPVPVELSALPALDAVVISHDHYDHLDMDSIIALTRSQNAVFVVPLGV * * * : .***:***:**********:*:: *. *.* *.****: Mb0930|M.bovis_AF2122/97 GAHLRSWGVPQDRIVELDWNQSAQVDELTVVCVPARHFSGRFLSRNTTLW Rv0906|M.tuberculosis_H37Rv GAHLRSWGVPQDRIVELDWNQSAQVDELTVVCVPARHFSGRFLSRNTTLW MMAR_4624|M.marinum_M GAHLRSWGVPEDRIIELDWHQSAQVGELSVICMPARHFSGRFMSRNNTLW MUL_0235|M.ulcerans_Agy99 GAHLRSWGVPEDRIIEFDWHQSAQVGELSVICMPARHFSGRFMSRNNTLW MAV_1029|M.avium_104 GAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTTLW TH_0095|M.thermoresistible__bu GAHLRTWRIPEHRIVELDWYESRRIGDLRITCTPARHFSGRLFARNTTLW MSMEG_5638|M.smegmatis_MC2_155 GAHLRKWGIPEARIVELDWNESHRIGDLTIVCAPARHFSGRFLQRNTTLW Mflv_1756|M.gilvum_PYR-GCK GAHLRKWGIPSRRIVELDWHEGHRIGDLTLICTPARHFSGRLFSRDTTLW Mvan_4991|M.vanbaalenii_PYR-1 GAHLRKWGIPESRIVELDWNEAHRIGDLTLICTPARHFSGRLFARDSTLW MAB_0960|M.abscessus_ATCC_1997 GAHLRGWGVSPARVIELDWDQSHQLGKLTLTCTQARHFSGRSITRNTTLW ***** * :. *::*:** :. ::..* : * ******* : *:.*** Mb0930|M.bovis_AF2122/97 ASWAFVGPNHRAYFGGDTGYTKSFTQIGADHGPFDLTLLPIGAYNTAWPD Rv0906|M.tuberculosis_H37Rv ASWAFVGPNHRAYFGGDTGYTKSFTQIGADHGPFDLTLLPIGAYNTAWPD MMAR_4624|M.marinum_M ASWAFVGPTHRAYFGGDTGYTKSFAEIGADHGPFDLTLMPIGAYNTGWPD MUL_0235|M.ulcerans_Agy99 ASWAFVGPTHRAYFGGDTGYTKSFAEIGADHGPFDLTLMPIGAYSTGWPD MAV_1029|M.avium_104 ASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPD TH_0095|M.thermoresistible__bu ASWVIAGPRHRAFFGGDTGYTKSFTEIGVDHGPFDLTLLPIGAYHPAWPD MSMEG_5638|M.smegmatis_MC2_155 ASWVVIGPGHRAFFGGDTGYTKSFSEIGSEHGPFDLTLLPVGAYNPGWPD Mflv_1756|M.gilvum_PYR-GCK ASWVITGPSHKAFFGGDTGYTKSFADIGAQYGPFDLTLMPIGAYHPAFAD Mvan_4991|M.vanbaalenii_PYR-1 SSWVVTGPTHKAFFGGDTGYTKSFAEIGAEHGPFDLTLLPIGAYHPAFAD MAB_0960|M.abscessus_ATCC_1997 ASWAFAGPKHKVFFGGDTGYTKAFKVIGDTYGPFDLTLLPVGAYNTSWAD :**.. ** *:.:*********:* * :*******:*:*** ..:.* Mb0930|M.bovis_AF2122/97 IHMNPEEAVRAHLDVTDSGSGMLVPVHWGTFRLAPHPWGEPVERLLAAAE Rv0906|M.tuberculosis_H37Rv IHMNPEEAVRAHLDVTDSGSGMLVPVHWGTFRLAPHPWGEPVERLLAAAE MMAR_4624|M.marinum_M IHMNPEEAVRAHLDVSDTGSGLLVPIHWGTFRLAPHPWAEPVERLLKAAE MUL_0235|M.ulcerans_Agy99 IHMNPEEAVRAHLDVSDTGSGLLVPIHWGTFRLAPHPWAEPVERLLKAAE MAV_1029|M.avium_104 VHMNPEEAVRAHRDVTN--DGLLVPIHWGTFRLAPHPWAEPVERLLAAAE TH_0095|M.thermoresistible__bu IHMNPEEAVRAHLDMAEADSGLLVPIHWATFRLAPHPWSEPVERLLAAAD MSMEG_5638|M.smegmatis_MC2_155 IHMNPEESVRAHLDMTES--GLLVPIHWATFRLAPHPWAEPVRRLLAAAD Mflv_1756|M.gilvum_PYR-GCK IHMNPEEAVRAHLDLADPDASVLVPVHWATFRLAPHPWAEPVERLVTAAE Mvan_4991|M.vanbaalenii_PYR-1 IHMNPEEAVRAHLDLADVDNSLMVPIHWATFRLAPHPWAEPAERLLTAAD MAB_0960|M.abscessus_ATCC_1997 IHMNPEEAVQTHLDLATA-QAPLLPIHWATFNLALHPWAEPIERVLAAAE :******:*::* *:: . ::*:**.**.** ***.** .*:: **: Mb0930|M.bovis_AF2122/97 PEHVTVAVPLPGQRVDPTGPMRLHPWWRL---- Rv0906|M.tuberculosis_H37Rv PEHVTVAVPLPGQRVDPTGPMRLHPWWRL---- MMAR_4624|M.marinum_M SDQVQVAVPLPGQRIDPAGPLRFNPWWRL---- MUL_0235|M.ulcerans_Agy99 SDQVQVAVPLPGQGVDPAGPLRFNPWWRL---- MAV_1029|M.avium_104 PAKVKVAVPVPGQRIDPAAPQKPDPWWRL---- TH_0095|M.thermoresistible__bu PARVPVAVPRPGERVDRDSAGASDQWWRPADGR MSMEG_5638|M.smegmatis_MC2_155 PAGVQVAVPKPGQRVDGGSP-VLDPWWQL---- Mflv_1756|M.gilvum_PYR-GCK LDGVRLAVPIPGERVLPGST--FEPWWRP---- Mvan_4991|M.vanbaalenii_PYR-1 AERVRVAVPMPGQRVVPEST--FDPWWRF---- MAB_0960|M.abscessus_ATCC_1997 EQGVTVVAPRPGQRADARQPAAPDGWWRLT--- * :..* **: . . **: