For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0067 | - | - | 100% (254) | isochorismatase hydrolase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3431c | - | 2e-06 | 29.91% (107) | isochorismatase hydrolase |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_4396 | - | 1e-128 | 87.80% (246) | isochorismatase hydrolase |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0067|M.thermoresistible__bu MAVTAAVDTPTRITPLEPVELDSKTLGFPENNVASIPPLARHWQELDLRE
MSMEG_4396|M.smegmatis_MC2_155 ------MERANRITPLEPVELDPKALGFPPNNVASIPPLAKHWQDLDFRE
MAB_3431c|M.abscessus_ATCC_199 ----------------MTGQVDAQPYPWPFDGPVDPGRTAVLCIDWQV-D
. ::*.:. :* :. .. * : :. :
TH_0067|M.thermoresistible__bu ILSRPAAFLSVSQSNSLYKPGGVQYAEGHAFRGSLEATVKAVQAAREASN
MSMEG_4396|M.smegmatis_MC2_155 ILSRPAAFLSVSQSNSLYRPGGVQYAEGHAFRGSLEATVKAVKAARAAKN
MAB_3431c|M.abscessus_ATCC_199 FCGRGGYVDTMGYDLSLTRAG-------------LEPTARVLAAARAVGM
: .* . . ::. . ** :.* **.*.:.: *** .
TH_0067|M.thermoresistible__bu FVSFNWIGYSVFRNDYPKTDFDRVQYHAWTGHIDATPEQIAWDNELVAEL
MSMEG_4396|M.smegmatis_MC2_155 FTSFNWIGFSVFRDDYPKTDFDRVQYDAWTGHIDATPEQIAWDNELVGEL
MAB_3431c|M.abscessus_ATCC_199 TIIHTREGHRPDLSDLPANKRWRSARIGAEIGVAGPCGRILVKGEPGWEI
.. *. .* * .. * . : .. :* ..* *:
TH_0067|M.thermoresistible__bu RELVRPGDNE-LYETALQTAFVGTDLPGTLIRQKVEVVVITGIHLDWCIE
MSMEG_4396|M.smegmatis_MC2_155 RELVEPGDNE-LFEKALQTAFVGTDLPGTLIRQKIEVVVLTGIHLDWCIE
MAB_3431c|M.abscessus_ATCC_199 VPEVAPLPGEPIIDKPGKGAFYATDLDLVLRTRGIRYIVLTGITTDVCVH
* * .* : :.. : ** .*** .* : :. :*:*** * *:.
TH_0067|M.thermoresistible__bu GNARAARDHGLLPIVIGDATGAAHPDQEPAAFERIN---NYFAPVITSDQ
MSMEG_4396|M.smegmatis_MC2_155 GNARAARDHGLLPIVIGDATGAAHPDHERAAFQRIN---NFFAPVITSDQ
MAB_3431c|M.abscessus_ATCC_199 TTMREANDRGFECLILSDCTGATDAGNHAAALKMVTMQGGVFGAVADSNQ
. * *.*:*: :::.*.***:...:. **:: :. . *..* *:*
TH_0067|M.thermoresistible__bu FVEWVTR
MSMEG_4396|M.smegmatis_MC2_155 FVEWLSG
MAB_3431c|M.abscessus_ATCC_199 LLGAL--
:: :