For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPDKRTALDDAVAQLRSGMTIGIAGWGSRRKPMAFVRAILRSDVTDLTVVTYGGPDLGLLCSAGKVKRVY YGFVSLDSPPFYDPWFAHARTSGAIEAREMDEGMLRCGLQAAAQRLPFLPIRAGLGSSVPQFWAGELQTV TSPYPAPGGGYETLIAMPALRLDAAFAHLNLGDSHGNAAYTGIDPYFDDLFLMAAERRFLSVERIVATEE LVKSVPPQALLVNRMMVDAIVEAPGGAHFTTAAPDYGRDEQFQRHYAEAASTQVGWQQFVHTYLSGTEAD YQAAVHNFGASR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3551 | - | - | 100% (292) | POSSIBLE COA-TRANSFERASE (ALPHA SUBUNIT) |
M. tuberculosis H37Rv | Rv2504c | scoA | 6e-11 | 25.10% (239) | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit alpha |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3581 | - | 1e-170 | 99.66% (292) | CoA-transferase subunit alpha |
M. gilvum PYR-GCK | Mflv_1489 | - | 1e-134 | 79.72% (286) | coenzyme A transferase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0605c | - | 1e-133 | 78.67% (286) | putative CoA-transferase alpha subunit |
M. marinum M | MMAR_5040 | - | 1e-152 | 91.00% (289) | CoA-transferase (alpha subunit) |
M. avium 104 | MAV_0609 | - | 1e-146 | 87.15% (288) | coenzyme A transferase, subunit A |
M. smegmatis MC2 155 | MSMEG_6002 | - | 1e-139 | 81.72% (290) | coenzyme A transferase, subunit A |
M. thermoresistible (build 8) | TH_1756 | - | 1e-145 | 86.01% (286) | POSSIBLE COA-TRANSFERASE (ALPHA SUBUNIT) |
M. ulcerans Agy99 | MUL_4114 | - | 1e-151 | 89.97% (289) | CoA-transferase (alpha subunit) |
M. vanbaalenii PYR-1 | Mvan_5267 | - | 1e-138 | 80.48% (292) | coenzyme A transferase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6002|M.smegmatis_MC2_155 MTDKRTTLDDAVSSIESGMTIGIGGWGSRRKPMAFVRALLRTDVTDLTVV Mvan_5267|M.vanbaalenii_PYR-1 MSDKRTTLDEAVSSIQSGMTIGIGGWGSRRKPMAFVRALLRTDVTDLTVV Mflv_1489|M.gilvum_PYR-GCK MTDKRTTLDEAVSSIESGMTIGLGGWGSRRKPMALVRALLRTDVTDLTVV Rv3551|M.tuberculosis_H37Rv MPDKRTALDDAVAQLRSGMTIGIAGWGSRRKPMAFVRAILRSDVTDLTVV Mb3581|M.bovis_AF2122/97 MPDKRTSLDDAVAQLRSGMTIGIAGWGSRRKPMAFVRAILRSDVTDLTVV MMAR_5040|M.marinum_M MSNKTTTLDDAVGHLRSGMTIGIAGWGSRRKPMAFVRAILRSDVTDLTVV MUL_4114|M.ulcerans_Agy99 MSNKTTTLDDAVGHLRSGMTIGIAGWGSRRKPMAFVRAILRSDVTDLTVV MAV_0609|M.avium_104 MADKRTSLDEAVAQLRSGMTIGIGGWGSRRKPMAFVRALLRTDVTDLTVV TH_1756|M.thermoresistible__bu MSDKRTSLDAVVAELRDGMTIGIGGWGSRRKPMAFVRAILRSDVKDLTVV MAB_0605c|M.abscessus_ATCC_199 MGDKRTTLDEVVAELRSGMTIGLGGWGSRRKPMAFVRAILRSDITDLTVV * :* *:** .*. :..*****:.**********:***:**:*:.***** MSMEG_6002|M.smegmatis_MC2_155 TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAKARTSGAIEAREM Mvan_5267|M.vanbaalenii_PYR-1 TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAKARTSGSIEAREM Mflv_1489|M.gilvum_PYR-GCK TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAKARTTGAIESREM Rv3551|M.tuberculosis_H37Rv TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAHARTSGAIEAREM Mb3581|M.bovis_AF2122/97 TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAHARTSGAIEAREM MMAR_5040|M.marinum_M SYGGPDVGLLCSAGKVKRVYYGFVSLDSLPFYDPWFAKARTSGAIEAREM MUL_4114|M.ulcerans_Agy99 SYGGPDVGLLCSTGKVKRVYYGFVSLDSPPFYDPWFAKARTSGAIEAREM MAV_0609|M.avium_104 TYGGPDLGLLCSAGKVKRVYYGFVSLDSPPFYDPWFAKARTSGAIQAREM TH_1756|M.thermoresistible__bu TYGGPDLGLLCAAGKVRRAYYGFVSLDSPPFYDPWFAKARTSGAIEVREM MAB_0605c|M.abscessus_ATCC_199 TYGGPDLGLLCSAGKVKKAYYGFVSLDSPPFYDPWFAKARTTGAIESREM :*****:****::***::.********* ********:***:*:*: *** MSMEG_6002|M.smegmatis_MC2_155 DEGMLRCGLQAAAQRLPFLPIRAGLGSDVRSFWGDELKTVKSPYPT-GDG Mvan_5267|M.vanbaalenii_PYR-1 DEGMLRCGLQAAAQRLPFLPIRAGLGSDVRAFWGDELKTVRSPYPT-GSG Mflv_1489|M.gilvum_PYR-GCK DEGMLRCGLQAAAQRLPFLPIRAGLGSDVRAFWGDELKTVKSPYPT-GSG Rv3551|M.tuberculosis_H37Rv DEGMLRCGLQAAAQRLPFLPIRAGLGSSVPQFWAGELQTVTSPYPAPGGG Mb3581|M.bovis_AF2122/97 DEGMLRCGLQAAAQRLPFLPIRAGLGSSVPQFWAGELQTVTSPYPAPGGG MMAR_5040|M.marinum_M DEGMLRCGLQAAAQRLPFLPIRAGLGSSVPDFWDGELATVTSPYPAPEGG MUL_4114|M.ulcerans_Agy99 DEGMLRCGLQAAAQRLPFLPIRAGLGSSVPDFWDGELATVTSPYPAPEGG MAV_0609|M.avium_104 DEGMLRCGLQAAANRLPFLPIRAGLGSSVPDFWEGELQTVTSPYPT-DGA TH_1756|M.thermoresistible__bu DEGMLRCGLQAAAQRLPFLPIRAGLGSSVPDFWEGELKTVTSPYPAPGGG MAB_0605c|M.abscessus_ATCC_199 DEGMVKCGLEAAAARLPFLPIRAGLGSDVMNFWGDELKTVTSPYADSSGQ ****::***:*** *************.* ** .** ** ***. . MSMEG_6002|M.smegmatis_MC2_155 YEELIAMPALNLDAAFVHMNLGDAKGNAAYTGIDPYFDDLFLMAAQKRFL Mvan_5267|M.vanbaalenii_PYR-1 YEELVAMPALNLDAAFVHMNIGDAKGNAAYTGIDPYFDDLFLMSAQKRLL Mflv_1489|M.gilvum_PYR-GCK YEELVAMPALNLDAALVHLNLGDAKGNAAYTGIDPYFDDLLLMSAQKRLM Rv3551|M.tuberculosis_H37Rv YETLIAMPALRLDAAFAHLNLGDSHGNAAYTGIDPYFDDLFLMAAERRFL Mb3581|M.bovis_AF2122/97 YETLIAMPALRLDAAFAHLNLGDSHGNAAYTGIDPYFDDLFLMAAERRFL MMAR_5040|M.marinum_M HETLIAMPALRLDAAFAHLNLGDCRGNAAYTGIDPYFDDLFLMAAEQRFL MUL_4114|M.ulcerans_Agy99 HETLIAMPALRLDAAFAHLNLGDCRGNAAYTGIDPYFDDLFLMAAEQRFL MAV_0609|M.avium_104 HETLIAMPALRLDAAFVHLNLGDAQGNAAYTGIDPYFDDLFLMAADKRFL TH_1756|M.thermoresistible__bu HETLIAMPALNLDAAFVHLNLGDARGNAAYTGIDPYFDDLYLMAAERRYL MAB_0605c|M.abscessus_ATCC_199 AETLVAMPALNLDAAFVHLNLGDATGNAAYTGVDPYFDDLYCLAAERRYL * *:*****.****:.*:*:**. *******:******* ::*::* : MSMEG_6002|M.smegmatis_MC2_155 SVERVVPTDELVKAVPPQALLINRMMVDTVVEAPNGAHFTTAEPDYRRDE Mvan_5267|M.vanbaalenii_PYR-1 SVERVVSTEELVKSVPPQALLINRMMVDTVVEAPNGAHFTTAEPDYRRDE Mflv_1489|M.gilvum_PYR-GCK SVEKVVSTEELVKSVPPQALLVNRMMVDSVVEAPNGAHFTTAEPDYRRDE Rv3551|M.tuberculosis_H37Rv SVERIVATEELVKSVPPQALLVNRMMVDAIVEAPGGAHFTTAAPDYGRDE Mb3581|M.bovis_AF2122/97 SVERIVATEELVKSVPPQALLVNRMMVDAIVEAPGGAHFTTAAPDYGRDE MMAR_5040|M.marinum_M SVERIVTTEELVKSVPPQAMLVNRMMVDAVVEAPGGAHFTTAAPDYGRDE MUL_4114|M.ulcerans_Agy99 SVERIVTTEELVKSAPPQAMLVNRMMVDAVVEAPGGAHFTTAAPDYGRDE MAV_0609|M.avium_104 SVERVVSTQELVKAVPPQALLVNRMMVDAVVEAPNGAHFTTAAPDYGRDE TH_1756|M.thermoresistible__bu SVERVVSTEELVKSVPPQALLVNRMMVDAVVEAPGGAHFTTAAPDYDRDE MAB_0605c|M.abscessus_ATCC_199 SVERVVSTEELVKAVPLQSLLLNRMMVDKVVEAPGGAHFTIGAADYGRDE ***::*.*:****:.* *::*:****** :****.***** . .** *** MSMEG_6002|M.smegmatis_MC2_155 KFQRHYAEAAGSEETWAEFVKTYLSGSEADYQAAVRKFAEAQKEAK- Mvan_5267|M.vanbaalenii_PYR-1 KFQRHYAEAAGSDETWAEFVKTYLSGSEADYQAAVRKFTEDREAAK- Mflv_1489|M.gilvum_PYR-GCK KFQRHYAEAAASDETWAEFVTTYLSGSEEDYQAAVRKFADAQKEASK Rv3551|M.tuberculosis_H37Rv QFQRHYAEAASTQVGWQQFVHTYLSGTEADYQAAVHNFGASR----- Mb3581|M.bovis_AF2122/97 QFQRHYAEAASTQVGWQQFVHTYLSGTEADYQAAVHNFGASR----- MMAR_5040|M.marinum_M KFQRHYAEAASTDQGWQQFVATYLSGTEADYQAAVREFGASS----- MUL_4114|M.ulcerans_Agy99 KFQRHYAEATSTDQGWQQFVATYLSGTEADYQAAMREFGASS----- MAV_0609|M.avium_104 KFQRHYAEAASTEEGWRQFVQTYLPGNEDDYQAAVRAFAEEAAK--- TH_1756|M.thermoresistible__bu KFQRHYAQAAGSEDTWREFVDTYLSGSEDDYQAAVRTFEQEASS--- MAB_0605c|M.abscessus_ATCC_199 KFQRHYAEAAGDPETWQKFVDTYLSGSEEDYQAAVKRFKEAQA---- :******:*:. * :** ***.*.* *****:: *