For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPVSQHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDYSGLRVCEYLPGKAIVMQMLVRYVDGDLG RYHEYGTAIMVNPPGTQRRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMADFNVTDGRRFGFDV SADGRLIAGIEFSTGLPVPTLGWQMLKTYSHHDGVTREIPWEMKVSGLRARLGGARLRLGDHPYAKELAS LGLPKRALLSQSAANVEMTFGDGHPI
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3519 | - | - | 100% (236) | hypothetical protein Rv3519 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3549 | - | 1e-137 | 100.00% (236) | hypothetical protein Mb3549 |
M. gilvum PYR-GCK | Mflv_1540 | - | 1e-80 | 63.87% (238) | hypothetical protein Mflv_1540 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5004 | - | 1e-118 | 85.59% (236) | hypothetical protein MMAR_5004 |
M. avium 104 | MAV_0640 | - | 3e-89 | 69.78% (225) | hypothetical protein MAV_0640 |
M. smegmatis MC2 155 | MSMEG_5919 | - | 7e-88 | 66.67% (237) | hypothetical protein MSMEG_5919 |
M. thermoresistible (build 8) | TH_2263 | - | 2e-48 | 68.42% (133) | HYPOTHETICAL PROTEIN Rv3519 |
M. ulcerans Agy99 | MUL_4078 | - | 1e-117 | 84.75% (236) | hypothetical protein MUL_4078 |
M. vanbaalenii PYR-1 | Mvan_5218 | - | 1e-82 | 63.45% (238) | hypothetical protein Mvan_5218 |
CLUSTAL 2.0.9 multiple sequence alignment Rv3519|M.tuberculosis_H37Rv MPVS--------QHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDY Mb3549|M.bovis_AF2122/97 MPVS--------QHTIAGTVLTMPVRIRTANLHSAMFSVPADPAQRLIDY MMAR_5004|M.marinum_M MPVS--------QHTIAGTVLTMPVRIRTANLHSAMFSVPAVAAQQLIDY MUL_4078|M.ulcerans_Agy99 MPVS--------QHIIAGTVLTMPVRIRTANLHSAMFSVPAVAAQQLIDY Mflv_1540|M.gilvum_PYR-GCK MSSARSRLCGVTQHTIAGTVLTMPVRVRRAYQHTAMFVVDAAAAQRMIDY Mvan_5218|M.vanbaalenii_PYR-1 MTQVTS------QHTIAGTVLTMPVRVRTAHQHTAMFVVDADAAQRMIDY MSMEG_5919|M.smegmatis_MC2_155 MT----------QHTIAGNTVTMPVRIRTADQHMAMFSVDADAAQRMIDH MAV_0640|M.avium_104 ----------------------MPVRIRKADVHTAMFSVDAQAAQRLIDY TH_2263|M.thermoresistible__bu -----------------------------------MFSVSADAAQRMIDY ** * * .**::**: Rv3519|M.tuberculosis_H37Rv SGLRVCEYLPG--KAIVMQMLVRYVDGDLGRYHEYGTAIMVNPPG---TQ Mb3549|M.bovis_AF2122/97 SGLRVCEYLPG--KAIVMQMLVRYVDGDLGRYHEYGTAIMVNPPG---TQ MMAR_5004|M.marinum_M SGLRVCEYLPG--KAMVMQMLVRYVDGDLGRYHEYGTAVMVNPPG---VQ MUL_4078|M.ulcerans_Agy99 SGLRVCEYLPG--KAMVMQMLVRYVDGDLGRYHEYGTAVMVNPPG---VQ Mflv_1540|M.gilvum_PYR-GCK SGLRVCRFGRGNRRVLAVLMLMRYEDTDLGQYYEYGTNIMVNPPGTAPSQ Mvan_5218|M.vanbaalenii_PYR-1 SGLRVCRFGRGHRKAMVVLMLMRYEDTDLGQYYEYGTNVMVNPPG---SN MSMEG_5919|M.smegmatis_MC2_155 SGLQVCRYRPG--RAMVILMLMRYVDGDLGEYLEYGTNVMVNPPG---ST MAV_0640|M.avium_104 SGLKVCQHRPG--RAVVNLMLARYIDGDLGQYHEFGTCVMVNPPG---ST TH_2263|M.thermoresistible__bu SGLEVCQYRPG--KAVVNLMLARYFDGDLGQYHEFGTAVMVNPRG---SH ***.**.. * :.:. ** ** * ***.* *:** :**** * Rv3519|M.tuberculosis_H37Rv RRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMADFNVTDG-RRF Mb3549|M.bovis_AF2122/97 RRGPRALTRAAAFIHHLPVDQVFTLEAGRTIWGFPKIMADFNVTDG-RRF MMAR_5004|M.marinum_M TRGPRALAKAAAFIHHLPVDQSFTLEAGRTIWGFPKIMADFNVREG-KKF MUL_4078|M.ulcerans_Agy99 TRGPRALAKAAAFIHHLPVDQSFTLEAGRTIWGFPKIMADFNVREG-KKF Mflv_1540|M.gilvum_PYR-GCK ATGLRALQSAGAFVHHLPVDQSFTLEAGRTIWGYPKVMADFTIRHG-RQF Mvan_5218|M.vanbaalenii_PYR-1 ATGMKALQSAGAFVHHLPVDQSFTLEAGRTIWGYPKVMADFTIRNG-RHF MSMEG_5919|M.smegmatis_MC2_155 ATGLRALQSAGAYIHHLPVDQSFTLEAGRTIWGYPKVMADFTVREA-RQF MAV_0640|M.avium_104 ARGWRALGEAAAFIHHLPVDQSFTLEAGRSIWGFPKIMADFTVREQ-GRF TH_2263|M.thermoresistible__bu GHGLKAFGRAAAFIHHLPVDQDFTLEAGQKIWGFPKIMADFTVRDAGTLF * :*: *.*::******* ******:.***:**:****.: . * Rv3519|M.tuberculosis_H37Rv GFDVSADGRLIAGIEFSTGLPVP---TLGWQMLKTYSHHDGVTREIPWEM Mb3549|M.bovis_AF2122/97 GFDVSADGRLIAGIEFSTGLPVP---TLGWQMLKTYSHHDGVTREIPWEM MMAR_5004|M.marinum_M SFDVSADGQLIAGIEFGNGVAVP---TRGAQVLQTYSHQDGVTREIPWEM MUL_4078|M.ulcerans_Agy99 SFDVSADGQLIAGIEFSNGVAVP---TRGAQVLQTYSHQDGVTREIPWEM Mflv_1540|M.gilvum_PYR-GCK GFDVSIDGRHAVSMDFAPGIPVPSAFGSRPQVHSTYSHLDGVTRETEGQM Mvan_5218|M.vanbaalenii_PYR-1 GFDVSIDGLHAVSMDFAPGIPVPAAFASKPQVHSTYSHLDGVTRETEGRM MSMEG_5919|M.smegmatis_MC2_155 GFDVSIGGKFAVGMEFRPGIPVPPVFTSRPQVHPTYSHLDGVTRRTEGQM MAV_0640|M.avium_104 GFDVSADGAHIAGIDFAPGLPVPSLFTSRPQVLKTYTFAEGTTREVPWEM TH_2263|M.thermoresistible__bu GFDVREGDELIASMDFARGLPAP---ARRPPASP---------------- .*** .. ..::* *:..* Rv3519|M.tuberculosis_H37Rv KVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDG Mb3549|M.bovis_AF2122/97 KVSGLRARLGGARLRLGDHPYAKELASLGLPKRALLSQSAANVEMTFGDG MMAR_5004|M.marinum_M RITGMRARLGGARLHLGDHPYARELASLGLPKRALVSQSAANVEMTFGDA MUL_4078|M.ulcerans_Agy99 RITGMRARLGGARLHLGEHPYARELASLGLPKRALVSQSTANVEMTFGDA Mflv_1540|M.gilvum_PYR-GCK VLSGVRYRPGGVSLRLGEHPYAAELSSLGLPKRALVSSSAANVDMTFADA Mvan_5218|M.vanbaalenii_PYR-1 VLSGVRYRPGGVSLRLGEHPYAAELSALGLPKRALVSSSAANVDMTFADS MSMEG_5919|M.smegmatis_MC2_155 RLSGVRYRFGGVRLRLGDHPYAAELASLGLPKRALVSSSAANVQMTFGEA MAV_0640|M.avium_104 RVRGLRGRPGGATLRLGTHPYAQELASLGLPTRAMISGSVGHVEMTFGDA TH_2263|M.thermoresistible__bu --------PSRAPCRLTPSPTAPPAK---FPGR----------------- . . :* * * :* * Rv3519|M.tuberculosis_H37Rv HPI--- Mb3549|M.bovis_AF2122/97 HPI--- MMAR_5004|M.marinum_M HAI--- MUL_4078|M.ulcerans_Agy99 HAI--- Mflv_1540|M.gilvum_PYR-GCK KIVGE- Mvan_5218|M.vanbaalenii_PYR-1 RTVGEA MSMEG_5919|M.smegmatis_MC2_155 EVIS-- MAV_0640|M.avium_104 HPLG-- TH_2263|M.thermoresistible__bu ------