For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SVLTVPRQTPRQRLPVLPCHVGDPDLWFADTPAGLEVAKTLCVSCPIRRQCLAAALQRAEPWGVWGGEIF DQGSIVSHKRPRGRPRKDAVA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3197A | whiB7 | - | 100% (92) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB7 |
| M. tuberculosis H37Rv | Rv3260c | whiB2 | 4e-07 | 36.73% (49) | transcriptional regulatory protein WHIB-like WHIB2 |
| M. tuberculosis H37Rv | Rv3219 | whiB1 | 3e-06 | 31.51% (73) | transcriptional regulatory protein WHIB-like WHIB1 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3221c | whiB7 | 1e-52 | 100.00% (92) | transcriptional regulatory protein WHIB-like WHIB7 |
| M. gilvum PYR-GCK | Mflv_4659 | - | 9e-31 | 67.53% (77) | transcription factor WhiB |
| M. leprae Br4923 | MLBr_00639 | whiB7 | 2e-33 | 69.32% (88) | putative transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3508c | - | 5e-31 | 76.39% (72) | putative transcriptional regulator |
| M. marinum M | MMAR_1365 | whiB7 | 2e-37 | 77.78% (90) | transcriptional regulatory protein Whib-like WhiB7 |
| M. avium 104 | MAV_4142 | - | 3e-34 | 69.66% (89) | transcription factor WhiB |
| M. smegmatis MC2 155 | MSMEG_1953 | - | 1e-33 | 70.59% (85) | transcription factor WhiB |
| M. thermoresistible (build 8) | TH_1134 | - | 1e-32 | 75.68% (74) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB7 |
| M. ulcerans Agy99 | MUL_2511 | whiB7 | 4e-37 | 76.67% (90) | transcriptional regulatory protein Whib-like WhiB7 |
| M. vanbaalenii PYR-1 | Mvan_1809 | - | 1e-30 | 71.23% (73) | transcription factor WhiB |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4659|M.gilvum_PYR-GCK ----MSSPTCEMTPS-SETRQPAVPCHVEDPDLWFAEDPRDLERAKALCA
Mvan_1809|M.vanbaalenii_PYR-1 ----MSSPTCEKT-------KLEVPCHVEDPDLWFAEDPRDLERAKALCA
MSMEG_1953|M.smegmatis_MC2_155 MSIAMTAPTTGVAPMTCETRLPAVPCHVGDPDLWFAENPGDLERAKALCA
TH_1134|M.thermoresistible__bu ---------------------VLMPCRTGDPDLWFADDPADLERAKALCA
MAV_4142|M.avium_104 ----MSAPTVPRQ---------ALPCHVGDPDLWFAEAPADLERAKQLCA
MAB_3508c|M.abscessus_ATCC_199 ----MMTVEVEAR-------RLALPCHVADADLWFAESPADLERAKALCA
Rv3197A|M.tuberculosis_H37Rv ----MSVLTVPRQTP--RQRLPVLPCHVGDPDLWFADTPAGLEVAKTLCV
Mb3221c|M.bovis_AF2122/97 ----MSVLTVPRQTP--RQRLPVLPCHVGDPDLWFADTPAGLEVAKTLCV
MMAR_1365|M.marinum_M MSMDMSALTVPRQT------LPVLPCHVGNPDLWFAETPADLEQAKELCA
MUL_2511|M.ulcerans_Agy99 ----MSALTVPRQT------LPVLPCHVGNPDLWFAETPADLEQAKEFCA
MLBr_00639|M.leprae_Br4923 ----MLTLTIPKQT------LPGLPCHADTSDLWFAETPADLECTKTLCA
:**:. .*****: * .** :* :*.
Mflv_4659|M.gilvum_PYR-GCK DCPLQRACLNAALERQEPWGVWGGEILDRGSVIARKRPRGRPRKDSK---
Mvan_1809|M.vanbaalenii_PYR-1 DCPLRRECLNAALQRQEPWGVWGGEILERGSVIARKRPRGRPRKDAK---
MSMEG_1953|M.smegmatis_MC2_155 GCPIRVQCLTAALERQEPWGVWGGEILDRGSIVARKRPRGRPRKDSGG--
TH_1134|M.thermoresistible__bu PCPVRRQCLAAALERQEPWGVWGGEIFDRGSIVARKRPRGRPRKNSD---
MAV_4142|M.avium_104 GCPVRRQCLAAALERAEPWGVWGGEILDRGAVLGFKRPRGRPRKDGRR--
MAB_3508c|M.abscessus_ATCC_199 DCPIRSQCLAAALDRAEPWGVWGGEILEQGTIVARKRPRGRPRKNPLPDA
Rv3197A|M.tuberculosis_H37Rv SCPIRRQCLAAALQRAEPWGVWGGEIFDQGSIVSHKRPRGRPRKDAVA--
Mb3221c|M.bovis_AF2122/97 SCPIRRQCLAAALQRAEPWGVWGGEIFDQGSIVSHKRPRGRPRKDAVA--
MMAR_1365|M.marinum_M SCPIRPQCLAAALERAEPWGVWGGEIFERGSIVNRKRPRGRPP-KVAA--
MUL_2511|M.ulcerans_Agy99 SCPIRPQCLAAALERAEPWGVWGGEIFERGSIVNRKRPRGRPP-KVAA--
MLBr_00639|M.leprae_Br4923 NCPIRRPCLEAAMERAEPWGVWGGEIFDRGLIVSRKRPRGRPCNDVVVV-
**:: ** **::* **********:::* :: ******* .
Mflv_4659|M.gilvum_PYR-GCK SPVAA
Mvan_1809|M.vanbaalenii_PYR-1 EPVAA
MSMEG_1953|M.smegmatis_MC2_155 NPAAA
TH_1134|M.thermoresistible__bu -PAAA
MAV_4142|M.avium_104 AGAAA
MAB_3508c|M.abscessus_ATCC_199 DTAAA
Rv3197A|M.tuberculosis_H37Rv -----
Mb3221c|M.bovis_AF2122/97 -----
MMAR_1365|M.marinum_M -----
MUL_2511|M.ulcerans_Agy99 -----
MLBr_00639|M.leprae_Br4923 -----