For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTSTKVEDRVTAAVLGAIGHALALTASMTWEILWALILGFALSAVVQAVVRRSTIVTLLGDDRPRTLVIA TGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGSTNLVVELGIILALLMGWQFTAAEFVGGPIMIL VLAVLFRLFVGARLIDAAREQAERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWLAI LRDLILGLLIAGAIAAWVPESFWQSFFLANHPAWSAVWGPIIGPIVAIVSFVCSIGNVPLAAVLWNGGIS FGGVIAFIFADLLILPILNIYRKYYGARMMLVLLGTFYASMVVAGYLIELLFGTTNLIPSQRSATVMTAE ISWNYTTWLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHDDHLGH
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv2963 | - | - | 100% (406) | PROBABLE INTEGRAL MEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2987 | - | 0.0 | 100.00% (406) | integral membrane protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1754 | - | 0.0 | 82.74% (394) | hypothetical protein MMAR_1754 |
| M. avium 104 | MAV_3787 | - | 0.0 | 80.99% (384) | hypothetical protein MAV_3787 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1997 | - | 0.0 | 82.49% (394) | hypothetical protein MUL_1997 |
| M. vanbaalenii PYR-1 | Mvan_5316 | - | 6e-13 | 23.68% (266) | permease |
CLUSTAL 2.0.9 multiple sequence alignment
Rv2963|M.tuberculosis_H37Rv ---------------------------------MTSTKVEDRVTAAVLGA
Mb2987|M.bovis_AF2122/97 ---------------------------------MTSTKVEDRVTAAVLGA
MMAR_1754|M.marinum_M ------------------------------------------MAGTVWGA
MUL_1997|M.ulcerans_Agy99 ------------------------------------------MAGTVLGA
MAV_3787|M.avium_104 -------------------------------------------MTTVLSA
Mvan_5316|M.vanbaalenii_PYR-1 MSTASRDAPAAGPGGPSERTRTLGILLLAAFGWVGAYVLNEHLWDAAVGW
:. .
Rv2963|M.tuberculosis_H37Rv IGHALALTAS-----MTWEILWALILGFALSAVVQAVVRRSTIVTLLGDD
Mb2987|M.bovis_AF2122/97 IGHALALTAS-----MTWEILWALILGFALSAVVQAVVRRSTIVTLLGDD
MMAR_1754|M.marinum_M VGHALALTGS-----MTWEILWALILGFTLSAMVQAVVRRSTIVALMGND
MUL_1997|M.ulcerans_Agy99 VGHALALTGS-----MTWEILWALILGFTLSAMVQAVVRRSTIVALMGND
MAV_3787|M.avium_104 VGHALAVAGS-----MTWEILWALILGFALSAVVQAVVRRTTIVALMGDA
Mvan_5316|M.vanbaalenii_PYR-1 LGLDLHTRAVGAVHFFLYDTVKIFLLLTGLMFVVGMLRASLDLDRARDYL
:* * . : :: : ::* * :* : : .
Rv2963|M.tuberculosis_H37Rv RPR----TLVIATGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGS
Mb2987|M.bovis_AF2122/97 RPR----TLVIATGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGS
MMAR_1754|M.marinum_M KPR----TLAVAAGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGS
MUL_1997|M.ulcerans_Agy99 KPR----TLAVAAGLGAASSSCSYAAVALARSLFRKGANFTAAMAFEIGS
MAV_3787|M.avium_104 RPR----TLAVSAGLGAASSSCSYAAVALARALFRKGADFTAAMAFEIGS
Mvan_5316|M.vanbaalenii_PYR-1 RGRGLFVGLVLAVFLGVVTPFCSCSSIPLFIGFVAAGIPLSITLTFLIAS
: * *.::. **..:. ** :::.* .:. * :: :::* *.*
Rv2963|M.tuberculosis_H37Rv TNLVVELGIILALLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAA
Mb2987|M.bovis_AF2122/97 TNLVVELGIILALLMGWQFTAAEFVGGPIMILVLAVLFRLFVGARLIDAA
MMAR_1754|M.marinum_M TNLVVELGIILALLMGWQFTAAEFVGGPLMIIVLAVLFRLFVRTRLIDAA
MUL_1997|M.ulcerans_Agy99 TNLVVELGIILALLMGWQFTAAESVGGPLMIIVLAVLFRLFVRTRLIDAA
MAV_3787|M.avium_104 TNLVVELGIILALLMGWQFTAAEFVGGPLMIVVLALLFRLFVRPRLVDAA
Mvan_5316|M.vanbaalenii_PYR-1 PLVSEIAAIMIGDQFGWHIAAVYVVAGSVLSLVIGWIFSRFDLSRWVEPM
. : .*::. :**:::*. *.*.:: :*:. :* * .* ::.
Rv2963|M.tuberculosis_H37Rv REQAERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWL
Mb2987|M.bovis_AF2122/97 REQAERGLAGSMEGHAAMDMSIKREGSFWRRLLSPPGFTSIAHVFVMEWL
MMAR_1754|M.marinum_M REQAERGIAGSMEGHAAMDMSVGGEDSFLRRLFSRRAFTSVSHVFVMEWA
MUL_1997|M.ulcerans_Agy99 REQAERGITGSMEGHAAMDMSVGGEDSFLRRLFSRRAFTSVSHVFVMEWA
MAV_3787|M.avium_104 RAQAQRGIAGSMEGHAAMDMSVAGDGPFWRRLLSPAGFTAVSHVFVMEWL
Mvan_5316|M.vanbaalenii_PYR-1 VFTTKVAALRADGRVPSLAERVD------------AAVDETKDIFRSVWL
:: . : .:: : .. .:* *
Rv2963|M.tuberculosis_H37Rv AILRDLILGLLIAGAIAAWVPESFWQSFFLANHPAWSAVWGPIIGPIVAI
Mb2987|M.bovis_AF2122/97 AILRDLILGLLIAGAIAAWVPESFWQSFFLANHPAWSAVWGPIIGPIVAI
MMAR_1754|M.marinum_M AILRDLVLGLVIAGAIAAWVPETFWQNFFLANHPNLSVVWGPLVGPVVAI
MUL_1997|M.ulcerans_Agy99 AILRYLVLGLVIAGAIAAWVPETFWQNFFLANHPNLSVVWGPPVGPVVAI
MAV_3787|M.avium_104 AILRDLVLGLLIAGAVAAWVPEKFWQSFFLVDHPGWSVLWGPIVGPLVAI
Mvan_5316|M.vanbaalenii_PYR-1 WVL----LGVGIGAVIHGWVPADFFVRFAGPGNP-----FAVVVATLAGV
:* **: *...: .*** *: * .:* :. :..:..:
Rv2963|M.tuberculosis_H37Rv VSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLI-LPILNIYRKYYGA
Mb2987|M.bovis_AF2122/97 VSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLI-LPILNIYRKYYGA
MMAR_1754|M.marinum_M VSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLI-LPILNIYRKYYGT
MUL_1997|M.ulcerans_Agy99 VSFVCSIGNVPLAAVLWNGGISFGGVIAFIFADLLI-LPILNIYRKYYGT
MAV_3787|M.avium_104 VSFVCSIGNVPLAAVLWNGGISFGGVIAFIYADLLI-LPILNIYRKYYGT
Mvan_5316|M.vanbaalenii_PYR-1 PLYVNGAGVVPIAEALWAKGMSLGTVMAFTMSTIALSVPQAVMLRRVMKP
:* . * **:* .** *:*:* *:** : : : :* : *: .
Rv2963|M.tuberculosis_H37Rv RMMLVLLGTFYASMVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTT
Mb2987|M.bovis_AF2122/97 RMMLVLLGTFYASMVVAGYLIELLFGTTNLIPSQRSATVMTAEISWNYTT
MMAR_1754|M.marinum_M KMMLTLLGTFYVSMVVAGYLIELIFGAANLIPRQRSATVLHAGISWNYTT
MUL_1997|M.ulcerans_Agy99 KMMLTLLGTFYVSMVVAGYLIELIFGAANLIPRQRSATVLHAGISWNYTT
MAV_3787|M.avium_104 RMMLTLLGTFYAAMVAAGYLVELIFGTSGLIPAERAATVAEASVSWNYTT
Mvan_5316|M.vanbaalenii_PYR-1 PLLALFFGTVAFGIMIIGFLFNLVG-------------------------
:: ::**. .:: *:*.:*:
Rv2963|M.tuberculosis_H37Rv WLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHDDHLGH
Mb2987|M.bovis_AF2122/97 WLNVIFLVIAAALVVRFITSGGLPMLRMMGGSPDAPHDHHDRHDDHLGH
MMAR_1754|M.marinum_M WLNIIFLGIAAVLVTRFITSGGMPMLRMMGGSPEAEGHQHG-HQCH---
MUL_1997|M.ulcerans_Agy99 WLNIIFLGIAAVLVTRFITSGGMPMLRMMGGSPEAEGHQHG-HQCH---
MAV_3787|M.avium_104 WLNVAFLVLALVLIVRFVRTNGLAMVRMMGGSPDPAEHRH---------
Mvan_5316|M.vanbaalenii_PYR-1 -------------------------------------------------