For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYP GSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAG NVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGR GAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFV LDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2786c | ribF | - | 100% (331) | bifunctional riboflavin kinase/FMN adenylyltransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2809c | ribF | 0.0 | 100.00% (331) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. gilvum PYR-GCK | Mflv_4025 | - | 1e-152 | 84.59% (305) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. leprae Br4923 | MLBr_00852 | ribF | 1e-168 | 87.46% (327) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. abscessus ATCC 19977 | MAB_3109c | - | 1e-151 | 78.88% (322) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. marinum M | MMAR_1921 | ribF | 1e-176 | 92.59% (324) | bifunctional fad synthetase/riboflavin biosynthesis protein |
M. avium 104 | MAV_3678 | ribF | 1e-163 | 91.21% (307) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. smegmatis MC2 155 | MSMEG_2653 | ribF | 1e-167 | 88.79% (321) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. thermoresistible (build 8) | TH_1280 | ribF | 1e-162 | 84.16% (322) | PROBABLE BIFUNCTIONAL FAD SYNTHETASE/RIBOFLAVIN BIOSYNTHESIS |
M. ulcerans Agy99 | MUL_2146 | ribF | 1e-176 | 92.28% (324) | bifunctional riboflavin kinase/FMN adenylyltransferase |
M. vanbaalenii PYR-1 | Mvan_2348 | - | 1e-167 | 87.58% (322) | bifunctional riboflavin kinase/FMN adenylyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment Rv2786c|M.tuberculosis_H37Rv -MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAG Mb2809c|M.bovis_AF2122/97 -MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAG MMAR_1921|M.marinum_M --------MQRWRGQDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAG MUL_2146|M.ulcerans_Agy99 --------MQRWRGQDEIPTDWGRCVLTVGVFDGVHRGHAELIAHAVKAG MAV_3678|M.avium_104 -------------------------MLTIGVFDGVHRGHAELIAHAVKAG MLBr_00852|M.leprae_Br4923 MGSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTG TH_1280|M.thermoresistible__bu --------VQRWRGQEEIPTDWGRCVLTIGVFDGVHRGHTELIGQAVKSG Mflv_4025|M.gilvum_PYR-GCK -------------------------MVTIGVFDGVHRGHQELIGRAVKAG Mvan_2348|M.vanbaalenii_PYR-1 --------MQRWRGQDEIPTDWGRCVVTIGVFDGVHRGHQELISRAVKAG MSMEG_2653|M.smegmatis_MC2_155 --------MQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELINHAVKAG MAB_3109c|M.abscessus_ATCC_199 --------MQRWRGQDEIPSDWGRCVLTIGVFDGVHRGHAELIGRAVKAA ::*:********** *** ::*::. Rv2786c|M.tuberculosis_H37Rv RARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVM Mb2809c|M.bovis_AF2122/97 RARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVM MMAR_1921|M.marinum_M RARGVPTVMMTFDPHPMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVM MUL_2146|M.ulcerans_Agy99 RARGVPTVMMTFDPHPMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVM MAV_3678|M.avium_104 RARNVPTVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVEELGIDVFLVM MLBr_00852|M.leprae_Br4923 RARNVPTVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELIEELGIDVFLVM TH_1280|M.thermoresistible__bu RARGVPTVVMTFDPHPMEVVFPGSHPAMLTTLTRRAELIEELGVDVFLVM Mflv_4025|M.gilvum_PYR-GCK RSRGVPTVLMTFDPHPMEVVFPGSHPAQLTTLTRRAELVEEMGIDVFLVM Mvan_2348|M.vanbaalenii_PYR-1 RSRGVPVVLMTFDPHPMEVVFPGSHPAQLTTLTRRAELVEELGIDVFLVM MSMEG_2653|M.smegmatis_MC2_155 RARGVPVVLMTFDPHPMEVVFPGNHPAQLTTLTRRAELVEELGIDVFLVM MAB_3109c|M.abscessus_ATCC_199 RELNLKSVLMTFDPHPMEVVFPGTHPAQLTTLTRRAELAEELGVDVFLVV * .: *:***********:**.*** ********** :::*::****: Rv2786c|M.tuberculosis_H37Rv PFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRA Mb2809c|M.bovis_AF2122/97 PFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRA MMAR_1921|M.marinum_M PFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGSVDTLRHA MUL_2146|M.ulcerans_Agy99 PFTTDFMKLTPDRFIHELLFEHLHVVEVVVGENFTFGKKAAGSVDTLRHA MAV_3678|M.avium_104 PFTTDFMKLTPDRYVHELLVENLHVVEVVVGENFTFGKKATGNVETLRRA MLBr_00852|M.leprae_Br4923 PFTTDFMKLTPDRYVHELLVEHLHVVEVVVGENFTFGKKAAGNVIMLRRA TH_1280|M.thermoresistible__bu PFTADFMKLTPERYVHELLVERLHVVEVVVGENFTFGKKAAGNVEMLRQA Mflv_4025|M.gilvum_PYR-GCK PFTSDFMKLTPERYVHELLVERLHVVEVVVGDNFTFGKKAAGNVELLRKA Mvan_2348|M.vanbaalenii_PYR-1 PFTSDFMKLTPERYIHELLVERLHVVEVLVGENFTFGKKAAGNVDLLRKA MSMEG_2653|M.smegmatis_MC2_155 PFTSDFMKLTPERYIHELLVEHLHVVEVVVGENFTFGKKAAGNVDMLRKA MAB_3109c|M.abscessus_ATCC_199 PFTPEFMKLSPERYVHELLVERLHVAEVVVGENFTFGKKAAGNVQMLKKA ***.:****:*:*::****.*.***.**:**:********:*.* *::* Rv2786c|M.tuberculosis_H37Rv GERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPH Mb2809c|M.bovis_AF2122/97 GERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPH MMAR_1921|M.marinum_M GERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVDAGDVMAATEALGRPH MUL_2146|M.ulcerans_Agy99 GERFGFAVEAMSLVSEHHSNETVTFSSTYIRSCVDAGDVMAATEALGRPH MAV_3678|M.avium_104 GERFGFAVEAMSLLSEHHSNQTVTFSSTYIRSCVDAGDVVAAMEALGRPH MLBr_00852|M.leprae_Br4923 GQRFGFAVGSMSLLSEHRGNETVAFSSTYIRSCVDAGDMMAATEALGRPH TH_1280|M.thermoresistible__bu GERFGFAVTAMSLVSEQTDGQRVTYSSTYIRSCVDAGDVVAAAEALGRPH Mflv_4025|M.gilvum_PYR-GCK GDRFGFAVDSLSLVAEHHRDETVTFSSTYIRSCVDAGDMVAAEEALGRPH Mvan_2348|M.vanbaalenii_PYR-1 GERFGFAVDSLSLVAEHHQDETVAFSSTYIRSCVDAGDMVAAAEALGRPH MSMEG_2653|M.smegmatis_MC2_155 GERFGFAVEAMSLVAEHHRNETVTFSSTYIRACVDAGDMVAAAEALGRPH MAB_3109c|M.abscessus_ATCC_199 GERFGFKVDAVTLVTEH----AVTFSSTYIRSCVDAGDMVAATEALGRPH *:**** * :::*::*: *::******:******::** ******* Rv2786c|M.tuberculosis_H37Rv RVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT Mb2809c|M.bovis_AF2122/97 RVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT MMAR_1921|M.marinum_M RVEGVVVRGYGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT MUL_2146|M.ulcerans_Agy99 RVEGVVVRGYGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT MAV_3678|M.avium_104 RVEGVVVRGEGRGIQLGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT MLBr_00852|M.leprae_Br4923 RVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAWFTVLGHGPVT TH_1280|M.thermoresistible__bu RVEGVVVRGDGRGRGLGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVT Mflv_4025|M.gilvum_PYR-GCK RVEGVVVRGDGRGRDLGFPTANVAPPMYAAIPADGVYAAWFTVLGHGPVV Mvan_2348|M.vanbaalenii_PYR-1 RVEGVVVRGDGRGRVLGFPTANVAPPMYSAIPADGVYAAWFTVLGHSPVV MSMEG_2653|M.smegmatis_MC2_155 RVEGVVVRGDGRGRVLGFPTANVAPPMYSAIPADGVYAAWFTVLGQGPQV MAB_3109c|M.abscessus_ATCC_199 RVEGVVVRGDGRGRELGFPTANVAPPMFSAIPADGVYAAWFTLLGHGPTM ****:**** *** *********.**::* ***********:**:.* Rv2786c|M.tuberculosis_H37Rv GTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVG Mb2809c|M.bovis_AF2122/97 GTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVG MMAR_1921|M.marinum_M GAVIPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTAADLYGQHVALDFVA MUL_2146|M.ulcerans_Agy99 GAVIPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTAADLYGQHVALDFVA MAV_3678|M.avium_104 GTVIPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTQADLYGQHVALDFVA MLBr_00852|M.leprae_Br4923 GTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVG TH_1280|M.thermoresistible__bu GTVIPGERYRAAVSIGTNPTFSGRTRTVEAFVLDTEADLYGQHVALDFVA Mflv_4025|M.gilvum_PYR-GCK GTVTPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTEADLYGQHVAVDFVA Mvan_2348|M.vanbaalenii_PYR-1 GTVTPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTSADLYGQHVAVDFVA MSMEG_2653|M.smegmatis_MC2_155 GTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTFADLYGQHVAVDFVS MAB_3109c|M.abscessus_ATCC_199 GTVVPGERYQAAVSVGSNPTFSGKARTVEAFILDTTADLYGQHVAVDFVA *:* *** *:****:*:******::******:**: *********:***. Rv2786c|M.tuberculosis_H37Rv RIRGQKKFESVRQLVAAMGADTERARDLLSTG- Mb2809c|M.bovis_AF2122/97 RIRGQKKFESVRQLVAAMGADTERARDLLSTG- MMAR_1921|M.marinum_M RIRGQKKFASVPELVAEIGADTERTRVLLSTG- MUL_2146|M.ulcerans_Agy99 RIRGQKKFASVPELVAEIGADTERTRVLLSTG- MAV_3678|M.avium_104 RIRGQHKFDSVDDLVVAMGQDTERARQLLSAG- MLBr_00852|M.leprae_Br4923 RIRGQRKFDSVADLVAEMEKDIDRARALLAD-- TH_1280|M.thermoresistible__bu RIRGQEKFDSVDDLIAAMRRDTEQAREILSR-- Mflv_4025|M.gilvum_PYR-GCK RLRGQEKFGSVADLITAMEGDTERARTILSAQ- Mvan_2348|M.vanbaalenii_PYR-1 RLRGQEKFDSVADLVTAMGADTERARALLSAH- MSMEG_2653|M.smegmatis_MC2_155 RIRGQEKFDSVDDLVVAMERDVERARTILRDSV MAB_3109c|M.abscessus_ATCC_199 RIRSMEKFKSIDDLVVAMGKDAEKARTILARN- *:*. .** *: :*:. : * :::* :*