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SDRKPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDD LITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLV TPQLRAAAQAVRGGA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2533c | nusB | - | 100% (156) | transcription antitermination protein NusB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2562c | nusB | 2e-83 | 99.36% (156) | transcription antitermination protein NusB |
M. gilvum PYR-GCK | Mflv_3751 | nusB | 1e-64 | 79.22% (154) | transcription antitermination protein NusB |
M. leprae Br4923 | MLBr_00523 | nusB | 3e-62 | 75.68% (148) | transcription antitermination protein NusB |
M. abscessus ATCC 19977 | MAB_2836c | nusB | 3e-54 | 72.34% (141) | transcription antitermination protein NusB |
M. marinum M | MMAR_2182 | nusB | 1e-66 | 80.54% (149) | N utilization substance protein NusB |
M. avium 104 | MAV_3410 | nusB | 4e-68 | 82.67% (150) | transcription antitermination protein NusB |
M. smegmatis MC2 155 | MSMEG_3036 | nusB | 1e-66 | 79.87% (154) | transcription antitermination protein NusB |
M. thermoresistible (build 8) | TH_0104 | nusB | 1e-64 | 78.95% (152) | N UTILIZATION SUBSTANCE PROTEIN NUSB (NUSB PROTEIN) |
M. ulcerans Agy99 | MUL_1766 | nusB | 1e-66 | 80.54% (149) | transcription antitermination protein NusB |
M. vanbaalenii PYR-1 | Mvan_2652 | nusB | 2e-65 | 79.49% (156) | transcription antitermination protein NusB |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3036|M.smegmatis_MC2_155 --------------MPDRRGD----RGRHQARKRAVDLLFEAEARGLTAE TH_0104|M.thermoresistible__bu ----------VTDKKPERRAD----RGRHQARKRAVDLLFEAEARQITPA MAB_2836c|M.abscessus_ATCC_199 MADIGSHSARAGDEPPGRRVSGSAKGGRRKARKRAVDLLFEAEAREMTAA Mflv_3751|M.gilvum_PYR-GCK --------------MPDRKGD----RGRHQARKRAVDLLFEAEARGITAA Mvan_2652|M.vanbaalenii_PYR-1 --------------MPDRKGD----RGRHQARKRAVDLLFEAEARGITAA Rv2533c|M.tuberculosis_H37Rv --------------MSD---R-KPVRGRHQARKRAVALLFEAEVRGISAA Mb2562c|M.bovis_AF2122/97 --------------MSD---R-KPVRGRHQARKRAVDLLFEAEVRGISAA MMAR_2182|M.marinum_M --------------MPEGRPG-KPVKGRHQARKRAVDLMFEAEARGLGPG MUL_1766|M.ulcerans_Agy99 --------------MPEGRPG-KPVKGRHQARKRAVDLMFEAEARGLGPG MAV_3410|M.avium_104 --------------MS------KPLRGRHQARKRAVDLLFEAEARGLSPA MLBr_00523|M.leprae_Br4923 --------------MS------NPVKGRHQARKRAVDLLFEAEARDLSPL . **::****** *:****.* : . MSMEG_3036|M.smegmatis_MC2_155 AVADSRAALAED-QDDVAPLNPYTVLVARGVTEHAAHIDDLISAHLQGWT TH_0104|M.thermoresistible__bu EAAEQRNALAEK-QPDIAPLNPYTVKVVRGVTEHLAHIDDLISAHLQGWT MAB_2836c|M.abscessus_ATCC_199 GVADERRALAAS-KPDIDPLNPYTVSVAHGVTEHAAHIDELISSHLQGWT Mflv_3751|M.gilvum_PYR-GCK EVAEARNALADNGADDIAPLNPYTVTVARGVTDHAAHIDDLISAHLQGWT Mvan_2652|M.vanbaalenii_PYR-1 EVAEARNALAEKRTDDIATLNPYTVTVAQGVTAHAAHIDDLISAHLQGWT Rv2533c|M.tuberculosis_H37Rv EVVDTRAALAEA-KPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWT Mb2562c|M.bovis_AF2122/97 EVVDTRAALAEA-KPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWT MMAR_2182|M.marinum_M EIADLRTELAET-KPDVAPLHPYTAAVARGIDQHAAHIDDLITSHLQGWT MUL_1766|M.ulcerans_Agy99 EIADLRTELAET-KPDVAPLHPYTAAVARGIGEHAAHIDDLITSHLQGWT MAV_3410|M.avium_104 EVVDVRTGLADT-NPEVAPLQPYTAAVARGVGDHAAHIDDLISSHLQGWT MLBr_00523|M.leprae_Br4923 EIIEVRSALAKS-KLDVAPLHPYTVVVAQGVSEHTARIDELIISHLQGWK : * ** :: *:***. *.:*: * *:**:** :**:**. MSMEG_3036|M.smegmatis_MC2_155 LERLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKELSTDESPGFV TH_0104|M.thermoresistible__bu LERLPAVDRAILRVAVWELLHADDVPEPVAVDEAVELAKELSTDESPGFV MAB_2836c|M.abscessus_ATCC_199 LARLPAVDRAILRVAVWELLHAQDVPEVVAVDEAVELAKQLSTDESPAFV Mflv_3751|M.gilvum_PYR-GCK LDRLPAVDRAVLRVAVWELLHAVDVPEPVAVDEAVELAKQLSTDDSPGFV Mvan_2652|M.vanbaalenii_PYR-1 LDRLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKQLSTDDSPGFV Rv2533c|M.tuberculosis_H37Rv LDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFV Mb2562c|M.bovis_AF2122/97 LDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFV MMAR_2182|M.marinum_M LDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVELAKELSTDDSPSFV MUL_1766|M.ulcerans_Agy99 LDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVELAKELSTDDSPSFV MAV_3410|M.avium_104 LDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVQLAKELSTDDSPGFV MLBr_00523|M.leprae_Br4923 LDRLPAVDRAILRVSIWELLYADDVPEPVAVDEAVELAKELSTDDSPGFV * ********:***::****:* **** *.*****:***:****:**.** MSMEG_3036|M.smegmatis_MC2_155 NGVLGQVMLVTPQIRAASQAVRGTGPAEG--------------------- TH_0104|M.thermoresistible__bu NGVLGQVMLVTPQIRAAAQAVRGTE------------------------- MAB_2836c|M.abscessus_ATCC_199 NGVLGQLMLVTPHIRGSS-APSSTD------------------------- Mflv_3751|M.gilvum_PYR-GCK NGVLGQVMLVTPQIRAAAAAVQASPDSGSATP------------------ Mvan_2652|M.vanbaalenii_PYR-1 NGVLGQVMLVTPQIRAAAAAMQGGHNGGSGT------------------- Rv2533c|M.tuberculosis_H37Rv NGVLGQVMLVTPQLRAAAQAVRGGA------------------------- Mb2562c|M.bovis_AF2122/97 NGVLGQVMLVTPQLRAAAQAVRGGA------------------------- MMAR_2182|M.marinum_M NGVLGQVMLVTPQIRAAAAAVRQAV----PDESSRLPENQGSC------- MUL_1766|M.ulcerans_Agy99 NGVLGQVMLVRPQIRAAAAAVRQAV----PDESSRLPENQGSC------- MAV_3410|M.avium_104 NGVLGQVMLVTPQIRAAARAVRG------PRDT----------------- MLBr_00523|M.leprae_Br4923 NGLLGKVMLVTPQIRAAAQAVQQAVRMAAGTSEDHVPQREPAAGQLGQDD **:**::*** *::*.:: * MSMEG_3036|M.smegmatis_MC2_155 ----------- TH_0104|M.thermoresistible__bu ----------- MAB_2836c|M.abscessus_ATCC_199 ----------- Mflv_3751|M.gilvum_PYR-GCK ----------- Mvan_2652|M.vanbaalenii_PYR-1 ----------- Rv2533c|M.tuberculosis_H37Rv ----------- Mb2562c|M.bovis_AF2122/97 ----------- MMAR_2182|M.marinum_M ----------- MUL_1766|M.ulcerans_Agy99 ----------- MAV_3410|M.avium_104 ----------- MLBr_00523|M.leprae_Br4923 SNGGQVAAVCR