For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQVLADIGAEATDHLSAAARHA ALGAAAIMGMNNVFYRGRGFLEGRYDDLRPGLRMNIIANPGIPKANFELWSFAVSAINGCSHCLVAHEHT LRTVGVDREAIFEALKAAAIVSGVAQALATIEALSPS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2429 | ahpD | - | 100% (177) | ALKYL HYDROPEROXIDE REDUCTASE D PROTEIN AHPD (ALKYL HYDROPEROXIDASE D) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2455 | ahpD | 1e-96 | 100.00% (177) | alkyl hydroperoxide reductase subunit D |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4407c | - | 5e-63 | 67.24% (174) | putative alkylhydroperoxidase AhpD |
M. marinum M | MMAR_2754 | ahpD | 4e-77 | 80.00% (175) | alkyl hydroperoxide reductase D protein AhpD |
M. avium 104 | MAV_2840 | ahpD | 3e-72 | 74.86% (175) | alkylhydroperoxidase, AhpD family protein |
M. smegmatis MC2 155 | MSMEG_4890 | ahpD | 6e-61 | 64.57% (175) | alkylhydroperoxidase, AhpD family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3000 | ahpD | 6e-78 | 80.57% (175) | alkyl hydroperoxide reductase D protein AhpD |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv2429|M.tuberculosis_H37Rv MSIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQ Mb2455|M.bovis_AF2122/97 MSIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQ MMAR_2754|M.marinum_M MSIENLKAALPEYAKDLKLNLGSISRTTVLDEEQLWGTLLASAAATRNAQ MUL_3000|M.ulcerans_Agy99 MSIENLKAALPEYAKDLKLNLGSISRTTVLDEEQLWGTLLASAAATRNAQ MAV_2840|M.avium_104 MSVENLKEALPEYAKDLKLNLGSITRTTELNEEQLWGTLLASAAATRNTQ MAB_4407c|M.abscessus_ATCC_199 MSIENLKEALPEYAKDLKLNLGTVARGTVLSQSQLWGTLVATAAATRNEQ MSMEG_4890|M.smegmatis_MC2_155 MSIDNIKSALPEYAKDLKLNLGSIANTTELTEQQLWGALVATAAATKNAR **::::* ********:****.:::. : * :.****:*:*:****:* : Rv2429|M.tuberculosis_H37Rv VLADIGAEATDHLSAAARHAALGAAAIMGMNNVFYRGRGFLEGRYDDLRP Mb2455|M.bovis_AF2122/97 VLADIGAEATDHLSAAARHAALGAAAIMGMNNVFYRGRGFLEGRYDDLRP MMAR_2754|M.marinum_M VLAEIGAEAADNLSAQAYQAALGAVSIMGMNNVFYRGRGFLEGQYDDLRA MUL_3000|M.ulcerans_Agy99 VLAEIGAEAADNLSAQAYQAALGAVSIMGMNNVFYRGRGFLEGQYDDLRA MAV_2840|M.avium_104 VLTEIGAEAADTLSAEAYHAALGAASVMAMNNVFYRGRGFLDGKYDDLRA MAB_4407c|M.abscessus_ATCC_199 VFKEIREEAAGILTPEALDAALGAASIMAMTNVFYRGRGFLDGAYDDLRP MSMEG_4890|M.smegmatis_MC2_155 LLREISEDALDILSEEAYNAALGAAAIMGMNNVFYRTKGQLDGKYDDLRA :: :* :* . *: * .*****.::*.*.***** :* *:* *****. Rv2429|M.tuberculosis_H37Rv GLRMNIIANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREA Mb2455|M.bovis_AF2122/97 GLRMNIIANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREA MMAR_2754|M.marinum_M GLRMNIIANPGVDKANFELWSFAVSSVNGCSHCVVAHEHTLREAGVGREA MUL_3000|M.ulcerans_Agy99 GLRMNIIANPGVDKANFELWSFAVSSVNGCSHCVVAHEHTLREAGVGREA MAV_2840|M.avium_104 GLRMNIIGNPGVEKANFELWCFAVSAINGCPDCVASHEHTLREAGVSRET MAB_4407c|M.abscessus_ATCC_199 GLRMNIIGNPGVDKSEFELWSFAVSTINGCHYCVGSHEKVLREAGLTREQ MSMEG_4890|M.smegmatis_MC2_155 GLRMNIIGNPGVAKEDFELWSLAVSAINGCGHCLAAHEKTLRDADVARTT *******.***: * :****.:***::*** *: :**:.** ..: * Rv2429|M.tuberculosis_H37Rv IFEALKAAAIVSGVAQALATIEALSPS- Mb2455|M.bovis_AF2122/97 IFEALKAAAIVSGVAQALATIEALSPS- MMAR_2754|M.marinum_M VLEALKAAAIVCGVAQALTAAQTLAAVG MUL_3000|M.ulcerans_Agy99 VFEALKAAAIVCGVAQALTAAQTLAAVG MAV_2840|M.avium_104 IQEALKAAAIISGVAQAIVTSQTLATAG MAB_4407c|M.abscessus_ATCC_199 VLEALKIAAIVAGVAQALATVPALV--- MSMEG_4890|M.smegmatis_MC2_155 IFEAIRLASIVSGVAQALLTADTLAAV- : **:: *:*:.*****: : :*