For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSSPRERRPASQAPRLSRRPPAHQTSRSSPDTTAPTGSGLSNRFVNDNGIVTDTTASGTNCPPPPRAAAR RASSPGESPQLVIFDLDGTLTDSARGIVSSFRHALNHIGAPVPEGDLATHIVGPPMHETLRAMGLGESAE EAIVAYRADYSARGWAMNSLFDGIGPLLADLRTAGVRLAVATSKAEPTARRILRHFGIEQHFEVIAGAST DGSRGSKVDVLAHALAQLRPLPERLVMVGDRSHDVDGAAAHGIDTVVVGWGYGRADFIDKTSTTVVTHAA TIDELREALGV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2232 | - | - | 100% (291) | hypothetical protein Rv2232 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2257 | - | 1e-166 | 100.00% (291) | hypothetical protein Mb2257 |
M. gilvum PYR-GCK | Mflv_2889 | - | 1e-79 | 64.71% (221) | HAD family hydrolase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1901c | - | 6e-71 | 62.33% (215) | hypothetical protein MAB_1901c |
M. marinum M | MMAR_3308 | - | 1e-89 | 75.24% (210) | hypothetical protein MMAR_3308 |
M. avium 104 | MAV_2207 | - | 3e-87 | 74.55% (220) | hypothetical protein MAV_2207 |
M. smegmatis MC2 155 | MSMEG_4308 | - | 2e-86 | 70.18% (218) | 5'-nucleotidase |
M. thermoresistible (build 8) | TH_1464 | - | 3e-87 | 66.39% (241) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1320 | - | 2e-55 | 75.56% (135) | hypothetical protein MUL_1320 |
M. vanbaalenii PYR-1 | Mvan_3621 | - | 2e-82 | 67.42% (221) | HAD family hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2889|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3621|M.vanbaalenii_PYR-1 -------------------------------------------------- Rv2232|M.tuberculosis_H37Rv MSSPRERRPASQAPRLSRRPPAHQTSRSSPDTTAPTGSGLSNRFVNDNGI Mb2257|M.bovis_AF2122/97 MSSPRERRPASQAPRLSRRPPAHQTSRSSPDTTAPTGSGLSNRFVNDNGI MMAR_3308|M.marinum_M -------------------------------------------------- MUL_1320|M.ulcerans_Agy99 -------------------------------------------------- MAV_2207|M.avium_104 -------------------------------------------------- TH_1464|M.thermoresistible__bu -------------------------------------------------- MSMEG_4308|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1901c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_2889|M.gilvum_PYR-GCK MTDMLDGTRRVAP------------VGRGDLVLFDLDGTLTDSAEGIVAS Mvan_3621|M.vanbaalenii_PYR-1 MTDMLDGTRDLAP------------VERGDVVIFDLDGTLTDSAEGIVAS Rv2232|M.tuberculosis_H37Rv VTDTTASGTNCPPPPRAAARRASSPGESPQLVIFDLDGTLTDSARGIVSS Mb2257|M.bovis_AF2122/97 VTDTTASGTNCPPPPRAAARRASSPGESPQLVIFDLDGTLTDSARGIVSS MMAR_3308|M.marinum_M -------------------------------MIFDLDGTLTDSAHGIVAS MUL_1320|M.ulcerans_Agy99 -------------------------------------------------- MAV_2207|M.avium_104 MTGTTSADPAAP---------------AAQLVIFDLDGTLTDSAEGIVAS TH_1464|M.thermoresistible__bu VTETRDDTAAVPAGAVDAARRPVDPALRPELVIFDLDGTLTDSAEGIVSS MSMEG_4308|M.smegmatis_MC2_155 MTDVVTGRVSELTP-----------DTRPQLVLFDLDGTLTDSAEGIVSS MAB_1901c|M.abscessus_ATCC_199 -----------------------------MLVIFDLDGTLTDSAPGIVSS Mflv_2889|M.gilvum_PYR-GCK FRHALQSVGAAVPDGDLVSKIVGPPMPLTFQRMGLGDLVDDAIAAYRADY Mvan_3621|M.vanbaalenii_PYR-1 FRHALHAVGAPVPDGDLVSRIVGPPMHVTLQQMGLGEHADAAIAAYRADY Rv2232|M.tuberculosis_H37Rv FRHALNHIGAPVPEGDLATHIVGPPMHETLRAMGLGESAEEAIVAYRADY Mb2257|M.bovis_AF2122/97 FRHALNHIGAPVPEGDLATHIVGPPMHETLRAMGLGESAEEAIVAYRADY MMAR_3308|M.marinum_M FRHALNHIGAAVPDGDLVAQIVGPPMDDTFHAMELGDRVEDAIAAFRAEY MUL_1320|M.ulcerans_Agy99 -------------------------------------------------- MAV_2207|M.avium_104 FLHALESIGAPVPPGDLVAQIVGPPMDDTFRSMQLGEDAEAAIAAFRAEY TH_1464|M.thermoresistible__bu FRHALASVGAAVPDGDLAARIIGPPMHHTLRSLGLGDQTDAAIDAYRQDY MSMEG_4308|M.smegmatis_MC2_155 FRHALQAVGAPVPDGDLASRIVGPPMHHTLTSLGLGDQADEAIAAYRADY MAB_1901c|M.abscessus_ATCC_199 FRHALSHVGAPEPTGDIASRVVGPPMHITLGSMGLGERADDAIAAYRADY Mflv_2889|M.gilvum_PYR-GCK TTRGWSMNRPFDGIPALLADLQAAGVRMAVATSKAETTAQRILAHFGLDG Mvan_3621|M.vanbaalenii_PYR-1 VSRGWAMNQPFTGIPALLADLQAAGVRMAVATSKAEPTAQRILAHFGLDG Rv2232|M.tuberculosis_H37Rv SARGWAMNSLFDGIGPLLADLRTAGVRLAVATSKAEPTARRILRHFGIEQ Mb2257|M.bovis_AF2122/97 SARGWAMNSLFDGIGPLLADLRTAGVRLAVATSKAEPTARRILRHFGIEQ MMAR_3308|M.marinum_M GARGWAMNTLFDGIAPLLADLRAAGVRLAVATCKLEPTARRVLAHFGLDA MUL_1320|M.ulcerans_Agy99 ------MNTLFDGIAPLLADLRAAGVRLAVATCKLEPTARRVLAHFGLDA MAV_2207|M.avium_104 GARGWAMNTLFDGIEALLADLRAAGVRLAVATSKLEPTARRILAHFGLDH TH_1464|M.thermoresistible__bu RARGWAMNRVYDGIPELLADLRAAEVRLAVATSKAEPTAQRILAHFGLAD MSMEG_4308|M.smegmatis_MC2_155 TSRGWAMNSLFDGIPALLSDLRAAGVRLAVATSKAEPTARRILEHFELDG MAB_1901c|M.abscessus_ATCC_199 GERGWAVNEMFDGIRDVLTRLREAGVPMVVATSKSEPIAARILEHFGLAE :* : ** :*: *: * * :.***.* *. * *:* ** : Mflv_2889|M.gilvum_PYR-GCK HFEVIAGASNDGTRAAKSDVVAHALAQLAPVPDN-VVMIGDRSHDVEGAA Mvan_3621|M.vanbaalenii_PYR-1 HFEVIAGAGADGTRAAKADVVARALEQLAPVPQR-MVMIGDRSHDVEGAA Rv2232|M.tuberculosis_H37Rv HFEVIAGASTDGSRGSKVDVLAHALAQLRPLPER-LVMVGDRSHDVDGAA Mb2257|M.bovis_AF2122/97 HFEVIAGASTDGSRGSKVDVLAHALAQLRPLPER-LVMVGDRSHDVDGAA MMAR_3308|M.marinum_M HFEVIAGATGDGARRSKTEVLAHALAQLHPLPER-VLMVGDRSHDVEGAA MUL_1320|M.ulcerans_Agy99 HFEVIAGATGDGARRSKTEVLAHALAQLHPLPER-VLMVGDRSHDVEGAT MAV_2207|M.avium_104 HFEVIAGASPDGSRKAKVEVLAHALAQLEPLPER-VLMVGDRSHDVHGAA TH_1464|M.thermoresistible__bu HFEFIAGASVDGSRAAKADVLARALQALQPLPER-VLMVGDRCHDVEGAA MSMEG_4308|M.smegmatis_MC2_155 YFEVIAGASPDGTRSLKSEVVAHALRQLEPLPDR-VLMVGDRMHDVEGAA MAB_1901c|M.abscessus_ATCC_199 FFQVIAGASPDGVRSSKADVIKHALSQLDDVPPTGVVMVGDRVHDVEGAA .*:.**** ** * * :*: :** * :* ::*:*** ***.**: Mflv_2889|M.gilvum_PYR-GCK VHGIATIVVGWGYGRTDFAG----RESGALAHVTDVDDLREVLGV Mvan_3621|M.vanbaalenii_PYR-1 VHGIGTIVVGWGYGGRDFAD----GDGGALAHVADIDDLREVLGV Rv2232|M.tuberculosis_H37Rv AHGIDTVVVGWGYGRADFIDK---TSTTVVTHAATIDELREALGV Mb2257|M.bovis_AF2122/97 AHGIDTVVVGWGYGRADFIDK---TSTTVVTHAATIDELREALGV MMAR_3308|M.marinum_M AHGIDTVVVGWGYGKADFAAG---THSGAALHAGTVDELREALGV MUL_1320|M.ulcerans_Agy99 AHGIDTVVVGWGYGKADFAAG---THSGAALHAGTVDELREALGV MAV_2207|M.avium_104 AHGIDTVVVGWGYGHAD-------SHPDGVTRAATIDELRRALGV TH_1464|M.thermoresistible__bu AHGIDTVVVGWGYGRDDFAHE---DAIPAYAHVATVAELREVLSV MSMEG_4308|M.smegmatis_MC2_155 EHGIDTVVVGWGYGGADFSGP---AAVVAHAHVETVEALRGVLGV MAB_1901c|M.abscessus_ATCC_199 AHGIGTVVVDWGYGATDFEGDPGQLAEWIIGRVSTPEQLLEELDV *** *:**.**** * :. * *.*