For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTSAVGTSGTAITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQA VPVTLVLIASSFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTSIPSSAYGSVF YLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFIR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2193 | ctaE | - | 100% (203) | PROBABLE CYTOCHROME C OXIDASE (SUBUNIT III) CTAE |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2216 | ctaE | 1e-116 | 100.00% (203) | cytochrome C oxidase subunit III |
M. gilvum PYR-GCK | Mflv_2956 | - | 1e-101 | 86.21% (203) | cytochrome c oxidase, subunit III |
M. leprae Br4923 | MLBr_00882 | ctaE | 1e-105 | 90.64% (203) | cytochrome C oxidase subunit III |
M. abscessus ATCC 19977 | MAB_1969c | - | 3e-96 | 82.65% (196) | cytochrome c oxidase subunit III |
M. marinum M | MMAR_3237 | ctaE | 1e-110 | 94.09% (203) | cytochrome C oxidase (subunit III) CtaE |
M. avium 104 | MAV_2299 | - | 1e-96 | 92.22% (180) | cytochrome c oxidase, subunit 3 |
M. smegmatis MC2 155 | MSMEG_4260 | - | 1e-103 | 88.18% (203) | cytochrome c oxidase subunit 3 |
M. thermoresistible (build 8) | TH_1041 | ctaE | 1e-86 | 82.78% (180) | PROBABLE CYTOCHROME C OXIDASE (SUBUNIT III) CTAE |
M. ulcerans Agy99 | MUL_3550 | ctaE | 1e-110 | 94.09% (203) | cytochrome C oxidase (subunit III) CtaE |
M. vanbaalenii PYR-1 | Mvan_3557 | - | 1e-99 | 85.22% (203) | cytochrome c oxidase, subunit III |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2956|M.gilvum_PYR-GCK MLDPGGVQQLQSVILAPVTSAVGS---SGTAITSRVHSLNRPNMVSVGTI Mvan_3557|M.vanbaalenii_PYR-1 MLDPGGVRQLQSVILAPVTSAVGT---SGTAITSRVHSLNRPNMVSVGTI Rv2193|M.tuberculosis_H37Rv -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI Mb2216|M.bovis_AF2122/97 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI MMAR_3237|M.marinum_M -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI MUL_3550|M.ulcerans_Agy99 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI MLBr_00882|M.leprae_Br4923 -----------------MTSTVGT---LGTAITSRVHSLNRPNMVSVGTV MAV_2299|M.avium_104 -------------------------------------------MVSVGTI MSMEG_4260|M.smegmatis_MC2_155 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI TH_1041|M.thermoresistible__bu -------------------------------------------MVSVGTI MAB_1969c|M.abscessus_ATCC_199 -----------------MTTAAAPGSPAGTAITQRVHSLNRPNMVSVGTI ******: Mflv_2956|M.gilvum_PYR-GCK VWLSSELMFFAGLFAMYFTARAQAGGDWPPEPTELNLALAVPVTLVLIAS Mvan_3557|M.vanbaalenii_PYR-1 VWLSSELMFFAGLFAMYFTARAQAHGDWPPEPTELNLALAVPVTLVLIAS Rv2193|M.tuberculosis_H37Rv VWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIAS Mb2216|M.bovis_AF2122/97 VWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIAS MMAR_3237|M.marinum_M VWLSSELMFFAGLFAMYFTARSQAGGKWPPPPTELNLYQAVPVTLVLIAS MUL_3550|M.ulcerans_Agy99 VWLSSELMFFAGLFAMYFTARSQAGGKWPPPPTELNLYQAVPVTLVLIAS MLBr_00882|M.leprae_Br4923 VWLSSELMFFAGLFAMYFTARAQAGGKWPP-STELNLYQAVPVTLVLIAS MAV_2299|M.avium_104 VWLSSELMFFAGLFAMYFTARAQSGGKWPPPPTELNLYQAVPVTLVLIAS MSMEG_4260|M.smegmatis_MC2_155 VWLSSELMFFAGLFAMYFTARAQAGGAWPPEPTELNLALAVPVTLVLIAS TH_1041|M.thermoresistible__bu VWLSSELMFFAGLFAMYFVARAQAGGDWPPPPTHLNLWQAVPVTLVLIAS MAB_1969c|M.abscessus_ATCC_199 VWLSSELMFFAGLFAFYFTARAQSGGNWPPEPTELNLGLAIPVTAVLVAS ***************:** **:*: * *** .*.*** *:*** **:** Mflv_2956|M.gilvum_PYR-GCK SFTCQMGVFAAERGDVFGLRRWYTLTLAMGTFFVLGQAYEYLHLVQHGTT Mvan_3557|M.vanbaalenii_PYR-1 SFTCQMGVFAAERGDVFGLRRWYTLTLAMGTFFVLGQGYEYIHLVEEGTT Rv2193|M.tuberculosis_H37Rv SFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTS Mb2216|M.bovis_AF2122/97 SFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTS MMAR_3237|M.marinum_M SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLVTHGTT MUL_3550|M.ulcerans_Agy99 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLVTHGTT MLBr_00882|M.leprae_Br4923 SFTCQMGVFSAERGDVFGLRRWYVITLLMGLFFVLGQGYEYYHLITHGTT MAV_2299|M.avium_104 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLMGHGTT MSMEG_4260|M.smegmatis_MC2_155 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYIHLVEHGTT TH_1041|M.thermoresistible__bu SFTCQLGVFAAERGDVFGLRRWYLITLAMGTFFVLGQGYEYVELVKAGTT MAB_1969c|M.abscessus_ATCC_199 SFTCQMGVFAAERGDVFGLRRWYVITLIMGTFFVLGQGYEYMNLVHEGTT *****:***:*****:******* :*: ** ******.*** .*: **: Mflv_2956|M.gilvum_PYR-GCK IPGSAYGTVFYLATGFHGLHVIGGLIAFVLLLLRTRMSKFTPAQATAAIV Mvan_3557|M.vanbaalenii_PYR-1 IPGSAYGTVFYLATGFHGLHVIGGLIAFVLLLIRTKMSKFTPAQATAAIV Rv2193|M.tuberculosis_H37Rv IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV Mb2216|M.bovis_AF2122/97 IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV MMAR_3237|M.marinum_M IPGSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV MUL_3550|M.ulcerans_Agy99 IPGSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV MLBr_00882|M.leprae_Br4923 IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLARTTMSKFTPAQATASIV MAV_2299|M.avium_104 IPGSAYGSVFYLATGFHGLHVTGGLVAFIFLLARTAMSKFTPAQATASIV MSMEG_4260|M.smegmatis_MC2_155 IPGSAYGSVFYLATGFHGLHVIGGLVAFVLLLARTKMSKFTPAQATAAIV TH_1041|M.thermoresistible__bu ISSSAFGSVFYMATGFHGLHVIGGLVAFVLLLFRTKMSKFTPAQATAAIV MAB_1969c|M.abscessus_ATCC_199 IAGSAYGSTFYLATGFHGLHVIGGLVAFVYLLIRTRMSKFTPAQATSAIV *..**:*:.**:********* ***:**: ** ** **********::** Mflv_2956|M.gilvum_PYR-GCK VSYYWHFVDIVWIALFAVIYFVR Mvan_3557|M.vanbaalenii_PYR-1 VSYYWHFVDIVWIALFAVIYFVR Rv2193|M.tuberculosis_H37Rv VSYYWHFVDIVWIALFTVIYFIR Mb2216|M.bovis_AF2122/97 VSYYWHFVDIVWIALFTVIYFIR MMAR_3237|M.marinum_M VSYYWHFVDIVWIALFTVIYFIR MUL_3550|M.ulcerans_Agy99 VSYYWHFVDIVWIALFTVIYFIR MLBr_00882|M.leprae_Br4923 VSYYWHFVDIVWIALFTVIYFIR MAV_2299|M.avium_104 VSYYWHFVDIVWIALFTVIYFIR MSMEG_4260|M.smegmatis_MC2_155 VSYYWHFVDIVWIALFATIYFVR TH_1041|M.thermoresistible__bu VSYYWHFVDIVWIALFATIYFVR MAB_1969c|M.abscessus_ATCC_199 VSYYWHFVDIVWIALFATIYFVR ****************:.***:*