For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTAAAPGSPAGTAITQRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAFYFTARAQSGGNWPPEPTELNLG LAIPVTAVLVASSFTCQMGVFAAERGDVFGLRRWYVITLIMGTFFVLGQGYEYMNLVHEGTTIAGSAYGS TFYLATGFHGLHVIGGLVAFVYLLIRTRMSKFTPAQATSAIVVSYYWHFVDIVWIALFATIYFVR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_1969c | - | - | 100% (206) | cytochrome c oxidase subunit III |
| M. abscessus ATCC 19977 | MAB_2769 | - | 9e-11 | 21.97% (173) | cytochrome c oxidase subunit III |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2216 | ctaE | 3e-96 | 82.65% (196) | cytochrome C oxidase subunit III |
| M. gilvum PYR-GCK | Mflv_2956 | - | 1e-100 | 86.14% (202) | cytochrome c oxidase, subunit III |
| M. tuberculosis H37Rv | Rv2193 | ctaE | 3e-96 | 82.65% (196) | cytochrome C oxidase subunit III |
| M. leprae Br4923 | MLBr_00882 | ctaE | 6e-94 | 82.56% (195) | cytochrome C oxidase subunit III |
| M. marinum M | MMAR_3237 | ctaE | 2e-96 | 83.67% (196) | cytochrome C oxidase (subunit III) CtaE |
| M. avium 104 | MAV_2299 | - | 4e-88 | 84.44% (180) | cytochrome c oxidase, subunit 3 |
| M. smegmatis MC2 155 | MSMEG_4260 | - | 1e-100 | 88.78% (196) | cytochrome c oxidase subunit 3 |
| M. thermoresistible (build 8) | TH_1041 | ctaE | 2e-88 | 85.00% (180) | PROBABLE CYTOCHROME C OXIDASE (SUBUNIT III) CTAE |
| M. ulcerans Agy99 | MUL_3550 | ctaE | 1e-96 | 83.67% (196) | cytochrome C oxidase (subunit III) CtaE |
| M. vanbaalenii PYR-1 | Mvan_3557 | - | 1e-100 | 87.76% (196) | cytochrome c oxidase, subunit III |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2216|M.bovis_AF2122/97 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
Rv2193|M.tuberculosis_H37Rv -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
MMAR_3237|M.marinum_M -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
MUL_3550|M.ulcerans_Agy99 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
MLBr_00882|M.leprae_Br4923 -----------------MTSTVGT---LGTAITSRVHSLNRPNMVSVGTV
MAV_2299|M.avium_104 -------------------------------------------MVSVGTI
MSMEG_4260|M.smegmatis_MC2_155 -----------------MTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
Mflv_2956|M.gilvum_PYR-GCK MLDPGGVQQLQSVILAPVTSAVGS---SGTAITSRVHSLNRPNMVSVGTI
Mvan_3557|M.vanbaalenii_PYR-1 MLDPGGVRQLQSVILAPVTSAVGT---SGTAITSRVHSLNRPNMVSVGTI
TH_1041|M.thermoresistible__bu -------------------------------------------MVSVGTI
MAB_1969c|M.abscessus_ATCC_199 -----------------MTTAAAPGSPAGTAITQRVHSLNRPNMVSVGTI
******:
Mb2216|M.bovis_AF2122/97 VWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIAS
Rv2193|M.tuberculosis_H37Rv VWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIAS
MMAR_3237|M.marinum_M VWLSSELMFFAGLFAMYFTARSQAGGKWPPPPTELNLYQAVPVTLVLIAS
MUL_3550|M.ulcerans_Agy99 VWLSSELMFFAGLFAMYFTARSQAGGKWPPPPTELNLYQAVPVTLVLIAS
MLBr_00882|M.leprae_Br4923 VWLSSELMFFAGLFAMYFTARAQAGGKWPP-STELNLYQAVPVTLVLIAS
MAV_2299|M.avium_104 VWLSSELMFFAGLFAMYFTARAQSGGKWPPPPTELNLYQAVPVTLVLIAS
MSMEG_4260|M.smegmatis_MC2_155 VWLSSELMFFAGLFAMYFTARAQAGGAWPPEPTELNLALAVPVTLVLIAS
Mflv_2956|M.gilvum_PYR-GCK VWLSSELMFFAGLFAMYFTARAQAGGDWPPEPTELNLALAVPVTLVLIAS
Mvan_3557|M.vanbaalenii_PYR-1 VWLSSELMFFAGLFAMYFTARAQAHGDWPPEPTELNLALAVPVTLVLIAS
TH_1041|M.thermoresistible__bu VWLSSELMFFAGLFAMYFVARAQAGGDWPPPPTHLNLWQAVPVTLVLIAS
MAB_1969c|M.abscessus_ATCC_199 VWLSSELMFFAGLFAFYFTARAQSGGNWPPEPTELNLGLAIPVTAVLVAS
***************:** **:*: * *** .*.*** *:*** **:**
Mb2216|M.bovis_AF2122/97 SFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTS
Rv2193|M.tuberculosis_H37Rv SFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTS
MMAR_3237|M.marinum_M SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLVTHGTT
MUL_3550|M.ulcerans_Agy99 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLVTHGTT
MLBr_00882|M.leprae_Br4923 SFTCQMGVFSAERGDVFGLRRWYVITLLMGLFFVLGQGYEYYHLITHGTT
MAV_2299|M.avium_104 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLMGHGTT
MSMEG_4260|M.smegmatis_MC2_155 SFTCQMGVFAAERGDVFGLRRWYVITFLMGLFFVLGQGYEYIHLVEHGTT
Mflv_2956|M.gilvum_PYR-GCK SFTCQMGVFAAERGDVFGLRRWYTLTLAMGTFFVLGQAYEYLHLVQHGTT
Mvan_3557|M.vanbaalenii_PYR-1 SFTCQMGVFAAERGDVFGLRRWYTLTLAMGTFFVLGQGYEYIHLVEEGTT
TH_1041|M.thermoresistible__bu SFTCQLGVFAAERGDVFGLRRWYLITLAMGTFFVLGQGYEYVELVKAGTT
MAB_1969c|M.abscessus_ATCC_199 SFTCQMGVFAAERGDVFGLRRWYVITLIMGTFFVLGQGYEYMNLVHEGTT
*****:***:*****:******* :*: ** ******.*** .*: **:
Mb2216|M.bovis_AF2122/97 IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV
Rv2193|M.tuberculosis_H37Rv IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV
MMAR_3237|M.marinum_M IPGSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV
MUL_3550|M.ulcerans_Agy99 IPGSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIV
MLBr_00882|M.leprae_Br4923 IPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLARTTMSKFTPAQATASIV
MAV_2299|M.avium_104 IPGSAYGSVFYLATGFHGLHVTGGLVAFIFLLARTAMSKFTPAQATASIV
MSMEG_4260|M.smegmatis_MC2_155 IPGSAYGSVFYLATGFHGLHVIGGLVAFVLLLARTKMSKFTPAQATAAIV
Mflv_2956|M.gilvum_PYR-GCK IPGSAYGTVFYLATGFHGLHVIGGLIAFVLLLLRTRMSKFTPAQATAAIV
Mvan_3557|M.vanbaalenii_PYR-1 IPGSAYGTVFYLATGFHGLHVIGGLIAFVLLLIRTKMSKFTPAQATAAIV
TH_1041|M.thermoresistible__bu ISSSAFGSVFYMATGFHGLHVIGGLVAFVLLLFRTKMSKFTPAQATAAIV
MAB_1969c|M.abscessus_ATCC_199 IAGSAYGSTFYLATGFHGLHVIGGLVAFVYLLIRTRMSKFTPAQATSAIV
*..**:*:.**:********* ***:**: ** ** **********::**
Mb2216|M.bovis_AF2122/97 VSYYWHFVDIVWIALFTVIYFIR
Rv2193|M.tuberculosis_H37Rv VSYYWHFVDIVWIALFTVIYFIR
MMAR_3237|M.marinum_M VSYYWHFVDIVWIALFTVIYFIR
MUL_3550|M.ulcerans_Agy99 VSYYWHFVDIVWIALFTVIYFIR
MLBr_00882|M.leprae_Br4923 VSYYWHFVDIVWIALFTVIYFIR
MAV_2299|M.avium_104 VSYYWHFVDIVWIALFTVIYFIR
MSMEG_4260|M.smegmatis_MC2_155 VSYYWHFVDIVWIALFATIYFVR
Mflv_2956|M.gilvum_PYR-GCK VSYYWHFVDIVWIALFAVIYFVR
Mvan_3557|M.vanbaalenii_PYR-1 VSYYWHFVDIVWIALFAVIYFVR
TH_1041|M.thermoresistible__bu VSYYWHFVDIVWIALFATIYFVR
MAB_1969c|M.abscessus_ATCC_199 VSYYWHFVDIVWIALFATIYFVR
****************:.***:*